RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 SAP30O75446 220 aa14.3□□□□□ -0.12
PTPN21-208ENST00000556564 MSMBP08118 114 aa14.3□□□□□ -0.12
PTPN21-208ENST00000556564 CKS2P33552 79 aa14.3□□□□□ -0.12
PTPN21-208ENST00000556564 MYOD1P15172 320 aa14.3□□□□□ -0.12
PTPN21-208ENST00000556564 ZNF524Q96C55 264 aa14.3□□□□□ -0.12
PTPN21-208ENST00000556564 GGACTQ9BVM4 153 aa14.3□□□□□ -0.12
PTPN21-208ENST00000556564 C10orf55Q5SWW7 151 aa14.29□□□□□ -0.12
PTPN21-208ENST00000556564 MIR17HGQ75NE6 70 aa14.29□□□□□ -0.12
PTPN21-208ENST00000556564 KLHDC1Q8N7A1 406 aa14.29□□□□□ -0.12
PTPN21-208ENST00000556564 OR11H4Q8NGC9 324 aa14.29□□□□□ -0.12
PTPN21-208ENST00000556564 GPR82Q96P67 336 aa14.29□□□□□ -0.12
PTPN21-208ENST00000556564 PHOX2AO14813 284 aa14.29□□□□□ -0.12
PTPN21-208ENST00000556564 SNRPEP62304 92 aaKnown RBP14.29□□□□□ -0.12
PTPN21-208ENST00000556564 OR52E5Q8NH55 327 aa14.29□□□□□ -0.12
PTPN21-208ENST00000556564 MEOX2P50222 304 aa14.29□□□□□ -0.12
PTPN21-208ENST00000556564 FAM3BP58499 235 aaPredicted RBP14.29□□□□□ -0.12
PTPN21-208ENST00000556564 COX19Q49B96 90 aa14.29□□□□□ -0.12
PTPN21-208ENST00000556564 MYO7BQ6PIF6 2116 aa14.29□□□□□ -0.12
PTPN21-208ENST00000556564 GTSCR1Q86UQ5 136 aa14.29□□□□□ -0.12
PTPN21-208ENST00000556564 NEU1Q99519 415 aa14.29□□□□□ -0.12
PTPN21-208ENST00000556564 CBY3A6NI87 242 aa14.29□□□□□ -0.12
PTPN21-208ENST00000556564 FAM74A7A6NL05 159 aa14.29□□□□□ -0.12
PTPN21-208ENST00000556564 Q6P435 159 aa14.29□□□□□ -0.12
PTPN21-208ENST00000556564 LHFPL4Q7Z7J7 247 aa14.29□□□□□ -0.12
PTPN21-208ENST00000556564 CEACAM4O75871 244 aa14.29□□□□□ -0.12
PTPN21-208ENST00000556564 AP5S1Q9NUS5 200 aa14.29□□□□□ -0.12
PTPN21-208ENST00000556564 SMUG1Q53HV7 270 aa14.28□□□□□ -0.12
PTPN21-208ENST00000556564 GGCTO75223 188 aaKnown RBP14.28□□□□□ -0.12
PTPN21-208ENST00000556564 GRNP28799 593 aaKnown RBP14.28□□□□□ -0.12
PTPN21-208ENST00000556564 SAA4P35542 130 aa14.28□□□□□ -0.12
PTPN21-208ENST00000556564 RPS20P60866 119 aaKnown RBP14.28□□□□□ -0.12
PTPN21-208ENST00000556564 HERVK_113P61574 105 aa14.28□□□□□ -0.12
PTPN21-208ENST00000556564 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.28□□□□□ -0.12
PTPN21-208ENST00000556564 TMEM262E9PQX1 116 aa14.28□□□□□ -0.12
PTPN21-208ENST00000556564 CD55P08174 381 aa14.28□□□□□ -0.12
PTPN21-208ENST00000556564 PRB4P10163 310 aaPredicted RBP14.28□□□□□ -0.12
PTPN21-208ENST00000556564 TCTAP57738 103 aa14.28□□□□□ -0.12
PTPN21-208ENST00000556564 SLC25A48Q6ZT89 311 aaKnown RBP14.28□□□□□ -0.12
PTPN21-208ENST00000556564 TMEM155Q4W5P6 130 aa14.28□□□□□ -0.12
PTPN21-208ENST00000556564 ZNF503-AS2A6NEH8 195 aa14.28□□□□□ -0.12
PTPN21-208ENST00000556564 FHL1Q13642 323 aa14.28□□□□□ -0.12
PTPN21-208ENST00000556564 WFDC12Q8WWY7 111 aa14.28□□□□□ -0.12
PTPN21-208ENST00000556564 COL6A6A6NMZ7 2263 aa14.27□□□□□ -0.12
PTPN21-208ENST00000556564 NPIPB6E9PJ23 425 aa14.27□□□□□ -0.12
PTPN21-208ENST00000556564 SMAGPQ0VAQ4 97 aa14.27□□□□□ -0.12
PTPN21-208ENST00000556564 STPG2Q8N412 459 aa14.27□□□□□ -0.12
PTPN21-208ENST00000556564 CACNG8Q8WXS5 425 aa14.27□□□□□ -0.12
PTPN21-208ENST00000556564 SCGB1C2P0DMR2 95 aa14.27□□□□□ -0.12
PTPN21-208ENST00000556564 GPR179Q6PRD1 2367 aa14.27□□□□□ -0.13
PTPN21-208ENST00000556564 PAX8Q06710 450 aa14.27□□□□□ -0.13
PTPN21-208ENST00000556564 C3orf36Q3SXR2 165 aa14.27□□□□□ -0.13
PTPN21-208ENST00000556564 ZNF343Q6P1L6 599 aa14.27□□□□□ -0.13
PTPN21-208ENST00000556564 ZNF329Q86UD4 541 aa14.27□□□□□ -0.13
PTPN21-208ENST00000556564 LHFPL5Q8TAF8 219 aa14.27□□□□□ -0.13
PTPN21-208ENST00000556564 TXNDC17Q9BRA2 123 aa14.27□□□□□ -0.13
PTPN21-208ENST00000556564 DANCRP0C864 163 aa14.27□□□□□ -0.13
PTPN21-208ENST00000556564 TMEM42Q69YG0 159 aa14.27□□□□□ -0.13
PTPN21-208ENST00000556564 KIR3DL3Q8N743 410 aa14.27□□□□□ -0.13
PTPN21-208ENST00000556564 COQ2Q96H96 371 aa14.27□□□□□ -0.13
PTPN21-208ENST00000556564 C19orf54Q5BKX5 351 aa14.27□□□□□ -0.13
PTPN21-208ENST00000556564 ACACAQ13085 2346 aa14.26□□□□□ -0.13
PTPN21-208ENST00000556564 C19orf35Q6ZS72 473 aa14.26□□□□□ -0.13
PTPN21-208ENST00000556564 RPL29P47914 159 aaKnown RBP14.26□□□□□ -0.13
PTPN21-208ENST00000556564 PRCDQ00LT1 54 aa14.26□□□□□ -0.13
PTPN21-208ENST00000556564 RPRMQ9NS64 109 aa14.26□□□□□ -0.13
PTPN21-208ENST00000556564 GPX4P36969 197 aaPredicted RBP14.26□□□□□ -0.13
PTPN21-208ENST00000556564 IL17RELQ6ZVW7 336 aa14.26□□□□□ -0.13
PTPN21-208ENST00000556564 CD8AP01732 235 aa14.26□□□□□ -0.13
PTPN21-208ENST00000556564 PSMG3Q9BT73 122 aaPredicted RBP14.26□□□□□ -0.13
PTPN21-208ENST00000556564 GVINP1Q7Z2Y8 2422 aa14.26□□□□□ -0.13
PTPN21-208ENST00000556564 RBFOX2O43251 390 aaKnown RBP eCLIP14.26□□□□□ -0.13
PTPN21-208ENST00000556564 C3orf56Q8N813 242 aa14.26□□□□□ -0.13
PTPN21-208ENST00000556564 TMEM167AQ8TBQ9 72 aa14.26□□□□□ -0.13
PTPN21-208ENST00000556564 BEX4Q9NWD9 120 aaPredicted RBP14.26□□□□□ -0.13
PTPN21-208ENST00000556564 CD33P20138 364 aa14.25□□□□□ -0.13
PTPN21-208ENST00000556564 HNRNPA3P51991 378 aaKnown RBP14.25□□□□□ -0.13
PTPN21-208ENST00000556564 CENPWQ5EE01 88 aa14.25□□□□□ -0.13
PTPN21-208ENST00000556564 RNF125Q96EQ8 232 aa14.25□□□□□ -0.13
PTPN21-208ENST00000556564 DENND4CQ5VZ89 1909 aa14.25□□□□□ -0.13
PTPN21-208ENST00000556564 NHLRC3Q5JS37 347 aa14.25□□□□□ -0.13
PTPN21-208ENST00000556564 BET1LQ9NYM9 111 aa14.25□□□□□ -0.13
PTPN21-208ENST00000556564 RIF1Q5UIP0 2472 aaKnown RBP14.25□□□□□ -0.13
PTPN21-208ENST00000556564 HERPUD1Q15011 391 aa14.25□□□□□ -0.13
PTPN21-208ENST00000556564 DEFB121Q5J5C9 76 aa14.25□□□□□ -0.13
PTPN21-208ENST00000556564 IQCJQ1A5X6 159 aa14.25□□□□□ -0.13
PTPN21-208ENST00000556564 C15orf32Q32M92 178 aa14.25□□□□□ -0.13
PTPN21-208ENST00000556564 DPH3Q96FX2 82 aa14.25□□□□□ -0.13
PTPN21-208ENST00000556564 Q9H3A6 140 aa14.25□□□□□ -0.13
PTPN21-208ENST00000556564 TBL2Q9Y4P3 447 aaKnown RBP14.25□□□□□ -0.13
PTPN21-208ENST00000556564 MUC21A0A0G2JKD1 596 aa14.24□□□□□ -0.13
PTPN21-208ENST00000556564 MUC21A0A140T8X8 626 aa14.24□□□□□ -0.13
PTPN21-208ENST00000556564 C2orf83Q53S99 150 aa14.24□□□□□ -0.13
PTPN21-208ENST00000556564 MUC21Q5SSG8 566 aa14.24□□□□□ -0.13
PTPN21-208ENST00000556564 HSPB8Q9UJY1 196 aa14.24□□□□□ -0.13
PTPN21-208ENST00000556564 A0A1W2PNU3 283 aaPredicted RBP14.24□□□□□ -0.13
PTPN21-208ENST00000556564 H0YJW9 148 aa14.24□□□□□ -0.13
PTPN21-208ENST00000556564 SAPCD1Q5SSQ6 148 aa14.24□□□□□ -0.13
PTPN21-208ENST00000556564 IGF2-ASQ6U949 168 aa14.24□□□□□ -0.13
PTPN21-208ENST00000556564 ZNRD1Q9P1U0 126 aa14.24□□□□□ -0.13
PTPN21-208ENST00000556564 ZNF257Q9Y2Q1 563 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms