RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 ZNF708P17019 499 aa5.03□□□□□ -1.6
TDP1-215ENST00000556498 GATA2P23769 480 aaPredicted RBP5.03□□□□□ -1.6
TDP1-215ENST00000556498 EDNRAP25101 427 aa5.03□□□□□ -1.6
TDP1-215ENST00000556498 HOXD3P31249 432 aaPredicted RBP5.03□□□□□ -1.6
TDP1-215ENST00000556498 MPV17P39210 176 aa5.03□□□□□ -1.6
TDP1-215ENST00000556498 IL15RAQ13261 267 aa5.03□□□□□ -1.6
TDP1-215ENST00000556498 ZNF791Q3KP31 576 aaPredicted RBP5.03□□□□□ -1.6
TDP1-215ENST00000556498 ANXA2RQ3ZCQ2 193 aa5.03□□□□□ -1.6
TDP1-215ENST00000556498 SYT14P1Q58G82 188 aa5.03□□□□□ -1.6
TDP1-215ENST00000556498 FAM201AQ5SY85 155 aa5.03□□□□□ -1.6
TDP1-215ENST00000556498 ZNF324BQ6AW86 544 aaPredicted RBP5.03□□□□□ -1.6
TDP1-215ENST00000556498 TEN1Q86WV5 123 aa5.03□□□□□ -1.6
TDP1-215ENST00000556498 EXOC3-AS1Q8N2X6 119 aa5.03□□□□□ -1.6
TDP1-215ENST00000556498 Q8NA96 180 aa5.03□□□□□ -1.6
TDP1-215ENST00000556498 SMRP1Q8NCR6 262 aa5.03□□□□□ -1.6
TDP1-215ENST00000556498 OR10G8Q8NGN5 311 aa5.03□□□□□ -1.6
TDP1-215ENST00000556498 ZBTB45Q96K62 511 aaPredicted RBP5.03□□□□□ -1.6
TDP1-215ENST00000556498 CLEC7AQ9BXN2 247 aa5.03□□□□□ -1.6
TDP1-215ENST00000556498 R3HDMLQ9H3Y0 253 aa5.03□□□□□ -1.6
TDP1-215ENST00000556498 SLC39A9Q9NUM3 307 aa5.03□□□□□ -1.6
TDP1-215ENST00000556498 PRO0461Q9UI25 63 aa5.03□□□□□ -1.6
TDP1-215ENST00000556498 KLHDC2Q9Y2U9 406 aa5.03□□□□□ -1.6
TDP1-215ENST00000556498 ATG2AQ2TAZ0 1938 aa5.03□□□□□ -1.6
TDP1-215ENST00000556498 TRAV13-1A0A0B4J241 112 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 TRAV26-2A0A0B4J265 109 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 MYBPHLA2RUH7 354 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 A6NIN4 97 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 H0YIZ8 118 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 K7EQS6 105 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 M0QYG6 137 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 SPINT2O43291 252 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 OR1I1O60431 355 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 LMX1BO60663 402 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 FGF1P05230 155 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 ELANEP08246 267 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 PYYP10082 97 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 ZNF20P17024 532 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 MDKP21741 143 aaPredicted RBP5.02□□□□□ -1.61
TDP1-215ENST00000556498 CBLN1P23435 193 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 HLA-DMBP28068 263 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 PPP1CCP36873 323 aaKnown RBP5.02□□□□□ -1.61
TDP1-215ENST00000556498 LOXL3P58215 753 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 EFEMP1Q12805 493 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 TAF10Q12962 218 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 CDSNQ15517 529 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 VMA21Q3ZAQ7 101 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 MS4A13Q5J8X5 152 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 MRPL2Q5T653 305 aaKnown RBP5.02□□□□□ -1.61
TDP1-215ENST00000556498 Q71RC1 249 aaPredicted RBP5.02□□□□□ -1.61
TDP1-215ENST00000556498 MRGPREQ86SM8 312 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 ZNF441Q8N8Z8 693 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 LRTM2Q8N967 370 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 C15orf53Q8NAA6 179 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 CLEC4CQ8WTT0 213 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 DNAJA3Q96EY1 480 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 OR2A5Q96R48 311 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 SMIM7Q9BQ49 75 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 FAM103A1Q9BTL3 118 aaKnown RBP5.02□□□□□ -1.61
TDP1-215ENST00000556498 TMEM59Q9BXS4 323 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 HES7Q9BYE0 225 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 TP53TG3Q9ULZ0 132 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 NEUROG3Q9Y4Z2 214 aa5.02□□□□□ -1.61
TDP1-215ENST00000556498 DDX60LQ5H9U9 1706 aaKnown RBP5.02□□□□□ -1.61
TDP1-215ENST00000556498 TRAV27A0A087WT01 109 aa5.01□□□□□ -1.61
TDP1-215ENST00000556498 TRBV7-7A0A0K0K1E9 115 aa5.01□□□□□ -1.61
TDP1-215ENST00000556498 FAM236AA0A1B0GUQ0 79 aa5.01□□□□□ -1.61
TDP1-215ENST00000556498 FAM236BA0A1B0GV22 79 aa5.01□□□□□ -1.61
TDP1-215ENST00000556498 A1L4Q6 167 aa5.01□□□□□ -1.61
TDP1-215ENST00000556498 LY6LH3BQJ8 138 aa5.01□□□□□ -1.61
TDP1-215ENST00000556498 SSSCA1O60232 199 aa5.01□□□□□ -1.61
TDP1-215ENST00000556498 P01737 135 aa5.01□□□□□ -1.61
TDP1-215ENST00000556498 COX7CP15954 63 aa5.01□□□□□ -1.61
TDP1-215ENST00000556498 SFTPDP35247 375 aa5.01□□□□□ -1.61
TDP1-215ENST00000556498 RPL23P62829 140 aaKnown RBP5.01□□□□□ -1.61
TDP1-215ENST00000556498 POU3F1Q03052 451 aaPredicted RBP5.01□□□□□ -1.61
TDP1-215ENST00000556498 AAED1Q7RTV5 226 aa5.01□□□□□ -1.61
TDP1-215ENST00000556498 SH2D6Q7Z4S9 175 aa5.01□□□□□ -1.61
TDP1-215ENST00000556498 LMX1AQ8TE12 382 aa5.01□□□□□ -1.61
TDP1-215ENST00000556498 RNF128Q8TEB7 428 aa5.01□□□□□ -1.61
TDP1-215ENST00000556498 S1PR3Q99500 378 aa5.01□□□□□ -1.61
TDP1-215ENST00000556498 FOXC2Q99958 501 aa5.01□□□□□ -1.61
TDP1-215ENST00000556498 AGPAT4-IT1Q9H0P7 198 aa5.01□□□□□ -1.61
TDP1-215ENST00000556498 HIGD1BQ9P298 99 aa5.01□□□□□ -1.61
TDP1-215ENST00000556498 Q9UF83 564 aa5.01□□□□□ -1.61
TDP1-215ENST00000556498 ARL2-SNX15V9GYD0 113 aa5.01□□□□□ -1.61
TDP1-215ENST00000556498 BTAF1O14981 1849 aa5.01□□□□□ -1.61
TDP1-215ENST00000556498 PATJQ8NI35 1801 aa5.01□□□□□ -1.61
TDP1-215ENST00000556498 ARFGEF2Q9Y6D5 1785 aa5.01□□□□□ -1.61
TDP1-215ENST00000556498 TRAV12-2A0A075B6T6 113 aa5□□□□□ -1.61
TDP1-215ENST00000556498 A0A1B0GTH9 108 aa5□□□□□ -1.61
TDP1-215ENST00000556498 OXTP01178 125 aa5□□□□□ -1.61
TDP1-215ENST00000556498 KLF5Q13887 457 aaPredicted RBP5□□□□□ -1.61
TDP1-215ENST00000556498 EBI3Q14213 229 aa5□□□□□ -1.61
TDP1-215ENST00000556498 CDK5R1Q15078 307 aa5□□□□□ -1.61
TDP1-215ENST00000556498 FKBP1CQ5VVH2 108 aa5□□□□□ -1.61
TDP1-215ENST00000556498 NCBP2-AS2Q69YL0 99 aa5□□□□□ -1.61
TDP1-215ENST00000556498 PRSS41Q7RTY9 318 aa5□□□□□ -1.61
TDP1-215ENST00000556498 HOGA1Q86XE5 327 aa5□□□□□ -1.61
TDP1-215ENST00000556498 MYOZ3Q8TDC0 251 aa5□□□□□ -1.61
TDP1-215ENST00000556498 RTL8AQ9BWD3 113 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms