RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 PAFAH1B2P68402 229 aa7.78□□□□□ -1.16
SYNE2-221ENST00000556342 TCF24Q7RTU0 167 aa7.78□□□□□ -1.16
SYNE2-221ENST00000556342 OR1P1Q8NH06 330 aa7.78□□□□□ -1.16
SYNE2-221ENST00000556342 DGCR14Q96DF8 476 aaKnown RBP7.78□□□□□ -1.16
SYNE2-221ENST00000556342 RHBDL2Q9NX52 303 aa7.78□□□□□ -1.16
SYNE2-221ENST00000556342 NSG2Q9Y328 171 aa7.78□□□□□ -1.16
SYNE2-221ENST00000556342 OR51B2Q9Y5P1 312 aa7.78□□□□□ -1.16
SYNE2-221ENST00000556342 X6R8D5 127 aa7.78□□□□□ -1.16
SYNE2-221ENST00000556342 DNAH11Q96DT5 4516 aa7.78□□□□□ -1.16
SYNE2-221ENST00000556342 IGHV4-4A0A075B6R2 117 aa7.77□□□□□ -1.17
SYNE2-221ENST00000556342 TRAV18A0A075B6X5 111 aa7.77□□□□□ -1.17
SYNE2-221ENST00000556342 IGHV4-28A0A0C4DH34 117 aa7.77□□□□□ -1.17
SYNE2-221ENST00000556342 SNAPC5O75971 98 aa7.77□□□□□ -1.17
SYNE2-221ENST00000556342 DFFBO76075 338 aa7.77□□□□□ -1.17
SYNE2-221ENST00000556342 FCER2P06734 321 aa7.77□□□□□ -1.17
SYNE2-221ENST00000556342 RBMY1A1P0DJD3 496 aaKnown RBP7.77□□□□□ -1.17
SYNE2-221ENST00000556342 RBMY1CP0DJD4 496 aa7.77□□□□□ -1.17
SYNE2-221ENST00000556342 HLA-DMBP28068 263 aa7.77□□□□□ -1.17
SYNE2-221ENST00000556342 GNRHRP30968 328 aa7.77□□□□□ -1.17
SYNE2-221ENST00000556342 MFAP4P55083 255 aa7.77□□□□□ -1.17
SYNE2-221ENST00000556342 DEFB131AP59861 70 aa7.77□□□□□ -1.17
SYNE2-221ENST00000556342 RBMY1FQ15415 496 aaKnown RBP7.77□□□□□ -1.17
SYNE2-221ENST00000556342 LEMD1Q68G75 181 aa7.77□□□□□ -1.17
SYNE2-221ENST00000556342 Q6ZTC4 211 aa7.77□□□□□ -1.17
SYNE2-221ENST00000556342 CADM3Q8N126 398 aa7.77□□□□□ -1.17
SYNE2-221ENST00000556342 GIMAP1Q8WWP7 306 aa7.77□□□□□ -1.17
SYNE2-221ENST00000556342 SLC25A46Q96AG3 418 aa7.77□□□□□ -1.17
SYNE2-221ENST00000556342 TMEM56Q96MV1 263 aa7.77□□□□□ -1.17
SYNE2-221ENST00000556342 NXF2Q9GZY0 626 aaKnown RBP7.77□□□□□ -1.17
SYNE2-221ENST00000556342 RRP15Q9Y3B9 282 aaKnown RBP7.77□□□□□ -1.17
SYNE2-221ENST00000556342 TRAV2A0A0B4J234 112 aa7.76□□□□□ -1.17
SYNE2-221ENST00000556342 TRAV10A0A0B4J240 114 aa7.76□□□□□ -1.17
SYNE2-221ENST00000556342 I3L2K1 104 aa7.76□□□□□ -1.17
SYNE2-221ENST00000556342 PGLYRP1O75594 196 aaPredicted RBP7.76□□□□□ -1.17
SYNE2-221ENST00000556342 KRASP01116 189 aa7.76□□□□□ -1.17
SYNE2-221ENST00000556342 RLN1P04808 185 aa7.76□□□□□ -1.17
SYNE2-221ENST00000556342 CD5P06127 495 aa7.76□□□□□ -1.17
SYNE2-221ENST00000556342 EIF4EP06730 217 aaKnown RBP7.76□□□□□ -1.17
SYNE2-221ENST00000556342 GIG44P09565 113 aaPredicted RBP7.76□□□□□ -1.17
SYNE2-221ENST00000556342 F2RP25116 425 aa7.76□□□□□ -1.17
SYNE2-221ENST00000556342 FGF9P31371 208 aaPredicted RBP7.76□□□□□ -1.17
SYNE2-221ENST00000556342 G6PCP35575 357 aa7.76□□□□□ -1.17
SYNE2-221ENST00000556342 LPAR6P43657 344 aa7.76□□□□□ -1.17
SYNE2-221ENST00000556342 HERV-K104P61576 105 aa7.76□□□□□ -1.17
SYNE2-221ENST00000556342 SFXN4Q6P4A7 337 aa7.76□□□□□ -1.17
SYNE2-221ENST00000556342 TPRA1Q86W33 373 aa7.76□□□□□ -1.17
SYNE2-221ENST00000556342 LILRB2Q8N423 598 aa7.76□□□□□ -1.17
SYNE2-221ENST00000556342 FAM24BQ8N5W8 94 aa7.76□□□□□ -1.17
SYNE2-221ENST00000556342 OR5AP2Q8NGF4 316 aa7.76□□□□□ -1.17
SYNE2-221ENST00000556342 NRG4Q8WWG1 115 aa7.76□□□□□ -1.17
SYNE2-221ENST00000556342 FCAMRQ8WWV6 532 aa7.76□□□□□ -1.17
SYNE2-221ENST00000556342 ST8SIA2Q92186 375 aa7.76□□□□□ -1.17
SYNE2-221ENST00000556342 BORCS5Q969J3 196 aa7.76□□□□□ -1.17
SYNE2-221ENST00000556342 SLC25A38Q96DW6 304 aa7.76□□□□□ -1.17
SYNE2-221ENST00000556342 TXN2Q99757 166 aa7.76□□□□□ -1.17
SYNE2-221ENST00000556342 MS4A6AQ9H2W1 248 aa7.76□□□□□ -1.17
SYNE2-221ENST00000556342 VSIRQ9H7M9 311 aa7.76□□□□□ -1.17
SYNE2-221ENST00000556342 TXNL4BQ9NX01 149 aaKnown RBP7.76□□□□□ -1.17
SYNE2-221ENST00000556342 FKBP11Q9NYL4 201 aa7.76□□□□□ -1.17
SYNE2-221ENST00000556342 PRNDQ9UKY0 176 aa7.76□□□□□ -1.17
SYNE2-221ENST00000556342 DNASE2O00115 360 aaPredicted RBP7.75□□□□□ -1.17
SYNE2-221ENST00000556342 ST8SIA3O43173 380 aa7.75□□□□□ -1.17
SYNE2-221ENST00000556342 MT-CO2P00403 227 aa7.75□□□□□ -1.17
SYNE2-221ENST00000556342 IGHV3-48P01763 117 aa7.75□□□□□ -1.17
SYNE2-221ENST00000556342 APOHP02749 345 aaPredicted RBP7.75□□□□□ -1.17
SYNE2-221ENST00000556342 MIFP14174 115 aa7.75□□□□□ -1.17
SYNE2-221ENST00000556342 TOMM20LQ6UXN7 152 aa7.75□□□□□ -1.17
SYNE2-221ENST00000556342 STHQ8IWL8 128 aa7.75□□□□□ -1.17
SYNE2-221ENST00000556342 OR5H6Q8NGV6 325 aa7.75□□□□□ -1.17
SYNE2-221ENST00000556342 GINS3Q9BRX5 216 aa7.75□□□□□ -1.17
SYNE2-221ENST00000556342 RNF126Q9BV68 326 aa7.75□□□□□ -1.17
SYNE2-221ENST00000556342 KRTAP4-9Q9BYQ8 210 aa7.75□□□□□ -1.17
SYNE2-221ENST00000556342 AUNIPQ9H7T9 357 aa7.75□□□□□ -1.17
SYNE2-221ENST00000556342 TMEM14BQ9NUH8 114 aa7.75□□□□□ -1.17
SYNE2-221ENST00000556342 BLOC1S6Q9UL45 172 aa7.75□□□□□ -1.17
SYNE2-221ENST00000556342 A0A0A6YYH2 397 aa7.74□□□□□ -1.17
SYNE2-221ENST00000556342 IGHV3-66A0A0C4DH42 116 aa7.74□□□□□ -1.17
SYNE2-221ENST00000556342 PRSS29PA6NIE9 313 aa7.74□□□□□ -1.17
SYNE2-221ENST00000556342 A6NJ64 397 aa7.74□□□□□ -1.17
SYNE2-221ENST00000556342 ZNF705EA8MWA4 302 aaPredicted RBP7.74□□□□□ -1.17
SYNE2-221ENST00000556342 RTL8CO15255 209 aa7.74□□□□□ -1.17
SYNE2-221ENST00000556342 GNG7O60262 68 aa7.74□□□□□ -1.17
SYNE2-221ENST00000556342 CBX5P45973 191 aa7.74□□□□□ -1.17
SYNE2-221ENST00000556342 SCAND1P57086 179 aa7.74□□□□□ -1.17
SYNE2-221ENST00000556342 TMEM41BQ5BJD5 291 aa7.74□□□□□ -1.17
SYNE2-221ENST00000556342 PVRIGQ6DKI7 326 aa7.74□□□□□ -1.17
SYNE2-221ENST00000556342 TRPT1Q86TN4 253 aaKnown RBP7.74□□□□□ -1.17
SYNE2-221ENST00000556342 CENPSQ8N2Z9 138 aa7.74□□□□□ -1.17
SYNE2-221ENST00000556342 SYT8Q8NBV8 401 aa7.74□□□□□ -1.17
SYNE2-221ENST00000556342 TSPAN14Q8NG11 270 aa7.74□□□□□ -1.17
SYNE2-221ENST00000556342 MOB3AQ96BX8 217 aa7.74□□□□□ -1.17
SYNE2-221ENST00000556342 TSC22D3Q99576 134 aa7.74□□□□□ -1.17
SYNE2-221ENST00000556342 EHFQ9NZC4 300 aa7.74□□□□□ -1.17
SYNE2-221ENST00000556342 MUC4Q99102 2169 aa7.73□□□□□ -1.17
SYNE2-221ENST00000556342 MEIS3P1A6NDR6 274 aa7.73□□□□□ -1.17
SYNE2-221ENST00000556342 AMBPP02760 352 aa7.73□□□□□ -1.17
SYNE2-221ENST00000556342 SPP1P10451 314 aa7.73□□□□□ -1.17
SYNE2-221ENST00000556342 C4BPBP20851 252 aa7.73□□□□□ -1.17
SYNE2-221ENST00000556342 UBE2UQ5VVX9 321 aa7.73□□□□□ -1.17
SYNE2-221ENST00000556342 MORN3Q6PF18 240 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms