RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 EPDR1Q9UM22 224 aa8.96□□□□□ -0.98
ACTN1-216ENST00000556083 TRGV2A0A075B6R0 118 aa8.95□□□□□ -0.98
ACTN1-216ENST00000556083 PLAURQ03405 335 aa8.95□□□□□ -0.98
ACTN1-216ENST00000556083 TMEM155Q4W5P6 130 aa8.95□□□□□ -0.98
ACTN1-216ENST00000556083 SAA2-SAA4A0A096LPE2 208 aa8.95□□□□□ -0.98
ACTN1-216ENST00000556083 CGB1A6NKQ9 187 aa8.95□□□□□ -0.98
ACTN1-216ENST00000556083 A8MXK9 166 aa8.95□□□□□ -0.98
ACTN1-216ENST00000556083 SAA2P0DJI9 122 aaPredicted RBP8.95□□□□□ -0.98
ACTN1-216ENST00000556083 DUTP33316 252 aaKnown RBP8.95□□□□□ -0.98
ACTN1-216ENST00000556083 MORN3Q6PF18 240 aaPredicted RBP8.95□□□□□ -0.98
ACTN1-216ENST00000556083 FLVCR1-AS1Q8TAF5 88 aa8.95□□□□□ -0.98
ACTN1-216ENST00000556083 ITLN2Q8WWU7 325 aaPredicted RBP8.95□□□□□ -0.98
ACTN1-216ENST00000556083 TRBV7-1A0A0A6YYK4 115 aa8.95□□□□□ -0.98
ACTN1-216ENST00000556083 F8VVB4 439 aa8.95□□□□□ -0.98
ACTN1-216ENST00000556083 F8VWA3 439 aa8.95□□□□□ -0.98
ACTN1-216ENST00000556083 REG1AP05451 166 aa8.95□□□□□ -0.98
ACTN1-216ENST00000556083 SPINK2P20155 84 aa8.95□□□□□ -0.98
ACTN1-216ENST00000556083 OR10J3Q5JRS4 329 aa8.95□□□□□ -0.98
ACTN1-216ENST00000556083 ATP1A1-AS1Q5TC04 95 aa8.95□□□□□ -0.98
ACTN1-216ENST00000556083 LAIR2Q6ISS4 152 aa8.95□□□□□ -0.98
ACTN1-216ENST00000556083 TMEM86BQ8N661 226 aa8.95□□□□□ -0.98
ACTN1-216ENST00000556083 TMEM105Q8N8V8 129 aa8.95□□□□□ -0.98
ACTN1-216ENST00000556083 ST6GALNAC3Q8NDV1 305 aa8.95□□□□□ -0.98
ACTN1-216ENST00000556083 OR13C6PQ8NH95 151 aa8.95□□□□□ -0.98
ACTN1-216ENST00000556083 F12P00748 615 aaPredicted RBP8.94□□□□□ -0.98
ACTN1-216ENST00000556083 CGAP01215 116 aa8.94□□□□□ -0.98
ACTN1-216ENST00000556083 PLNP26678 52 aa8.94□□□□□ -0.98
ACTN1-216ENST00000556083 SLC25A48Q6ZT89 311 aaKnown RBP8.94□□□□□ -0.98
ACTN1-216ENST00000556083 RP1P56715 2156 aa8.94□□□□□ -0.98
ACTN1-216ENST00000556083 RALGAPA2Q2PPJ7 1873 aa8.94□□□□□ -0.98
ACTN1-216ENST00000556083 TGIF2-C20orf24A0A0A6YYL0 155 aa8.94□□□□□ -0.98
ACTN1-216ENST00000556083 MBD3L4A6NDZ8 208 aaPredicted RBP8.94□□□□□ -0.98
ACTN1-216ENST00000556083 MBD3L3A6NE82 208 aaPredicted RBP8.94□□□□□ -0.98
ACTN1-216ENST00000556083 MBD3L5A6NJ08 208 aaPredicted RBP8.94□□□□□ -0.98
ACTN1-216ENST00000556083 CD59P13987 128 aa8.94□□□□□ -0.98
ACTN1-216ENST00000556083 CLEC19AQ6UXS0 136 aa8.94□□□□□ -0.98
ACTN1-216ENST00000556083 SPACA3Q8IXA5 215 aa8.94□□□□□ -0.98
ACTN1-216ENST00000556083 MBD3L2Q8NHZ7 208 aaPredicted RBP8.94□□□□□ -0.98
ACTN1-216ENST00000556083 OVOL2Q9BRP0 275 aa8.94□□□□□ -0.98
ACTN1-216ENST00000556083 GNB1LQ9BYB4 327 aa8.94□□□□□ -0.98
ACTN1-216ENST00000556083 TAF1LQ8IZX4 1826 aa8.94□□□□□ -0.98
ACTN1-216ENST00000556083 M0R381 172 aa8.94□□□□□ -0.98
ACTN1-216ENST00000556083 HBDP02042 147 aa8.94□□□□□ -0.98
ACTN1-216ENST00000556083 APOHP02749 345 aaPredicted RBP8.94□□□□□ -0.98
ACTN1-216ENST00000556083 CELA3AP09093 270 aa8.94□□□□□ -0.98
ACTN1-216ENST00000556083 RNF224P0DH78 156 aa8.94□□□□□ -0.98
ACTN1-216ENST00000556083 PAX8Q06710 450 aa8.94□□□□□ -0.98
ACTN1-216ENST00000556083 ZNF362Q5T0B9 420 aaPredicted RBP8.94□□□□□ -0.98
ACTN1-216ENST00000556083 LEAP2Q969E1 77 aa8.94□□□□□ -0.98
ACTN1-216ENST00000556083 EAF1Q96JC9 268 aaPredicted RBP8.94□□□□□ -0.98
ACTN1-216ENST00000556083 TRGV9Q99603 122 aa8.94□□□□□ -0.98
ACTN1-216ENST00000556083 PARD6GQ9BYG4 376 aaPredicted RBP8.94□□□□□ -0.98
ACTN1-216ENST00000556083 IGHG3P01860 377 aa8.93□□□□□ -0.98
ACTN1-216ENST00000556083 ERVK11-1P61568 191 aa8.93□□□□□ -0.98
ACTN1-216ENST00000556083 GREB1LQ9C091 1923 aaPredicted RBP8.93□□□□□ -0.98
ACTN1-216ENST00000556083 C9JCJ5 164 aa8.93□□□□□ -0.98
ACTN1-216ENST00000556083 TGFBR3LH3BV60 316 aa8.93□□□□□ -0.98
ACTN1-216ENST00000556083 RAMP1O60894 148 aa8.93□□□□□ -0.98
ACTN1-216ENST00000556083 PEAR1Q5VY43 1037 aaPredicted RBP8.93□□□□□ -0.98
ACTN1-216ENST00000556083 C1QL2Q7Z5L3 287 aa8.93□□□□□ -0.98
ACTN1-216ENST00000556083 PRADC1Q9BSG0 188 aa8.93□□□□□ -0.98
ACTN1-216ENST00000556083 FAM223BA6NKX1 122 aa8.93□□□□□ -0.98
ACTN1-216ENST00000556083 EIF3GO75821 320 aaKnown RBP eCLIP8.93□□□□□ -0.98
ACTN1-216ENST00000556083 IGKV3-15P01624 115 aa8.93□□□□□ -0.98
ACTN1-216ENST00000556083 ZP1P60852 638 aa8.93□□□□□ -0.98
ACTN1-216ENST00000556083 RHOGP84095 191 aa8.93□□□□□ -0.98
ACTN1-216ENST00000556083 ZNF324BQ6AW86 544 aaPredicted RBP8.93□□□□□ -0.98
ACTN1-216ENST00000556083 FAM223AQ8IWN6 122 aa8.93□□□□□ -0.98
ACTN1-216ENST00000556083 RNF166Q96A37 237 aaPredicted RBP8.93□□□□□ -0.98
ACTN1-216ENST00000556083 C5orf30Q96GV9 206 aa8.93□□□□□ -0.98
ACTN1-216ENST00000556083 NEUROG3Q9Y4Z2 214 aa8.93□□□□□ -0.98
ACTN1-216ENST00000556083 IGHV1-18A0A0C4DH31 117 aa8.93□□□□□ -0.98
ACTN1-216ENST00000556083 LILRA1O75019 489 aa8.93□□□□□ -0.98
ACTN1-216ENST00000556083 CD300CQ08708 224 aa8.93□□□□□ -0.98
ACTN1-216ENST00000556083 VKORC1L1Q8N0U8 176 aa8.93□□□□□ -0.98
ACTN1-216ENST00000556083 RNF182Q8N6D2 247 aa8.93□□□□□ -0.98
ACTN1-216ENST00000556083 LINC00477Q96M19 166 aa8.93□□□□□ -0.98
ACTN1-216ENST00000556083 LAMTOR2Q9Y2Q5 125 aa8.93□□□□□ -0.98
ACTN1-216ENST00000556083 RNF114Q9Y508 228 aa8.93□□□□□ -0.98
ACTN1-216ENST00000556083 POLR2AP24928 1970 aaKnown RBP8.92□□□□□ -0.98
ACTN1-216ENST00000556083 TRAV41A0A0B4J266 112 aa8.92□□□□□ -0.98
ACTN1-216ENST00000556083 ZNF688P0C7X2 276 aa8.92□□□□□ -0.98
ACTN1-216ENST00000556083 FOXL2P58012 376 aa8.92□□□□□ -0.98
ACTN1-216ENST00000556083 TMEM42Q69YG0 159 aa8.92□□□□□ -0.98
ACTN1-216ENST00000556083 PLPPR1Q8TBJ4 325 aa8.92□□□□□ -0.98
ACTN1-216ENST00000556083 TMEM170AQ8WVE7 144 aa8.92□□□□□ -0.98
ACTN1-216ENST00000556083 SLC25A28Q96A46 364 aa8.92□□□□□ -0.98
ACTN1-216ENST00000556083 PSG8Q9UQ74 426 aa8.92□□□□□ -0.98
ACTN1-216ENST00000556083 LOC285556D6RIA3 1793 aa8.92□□□□□ -0.98
ACTN1-216ENST00000556083 LYPD3O95274 346 aa8.92□□□□□ -0.98
ACTN1-216ENST00000556083 TMEM50AO95807 157 aa8.92□□□□□ -0.98
ACTN1-216ENST00000556083 BIVMQ86UB2 503 aa8.92□□□□□ -0.98
ACTN1-216ENST00000556083 MS4A6AQ9H2W1 248 aa8.92□□□□□ -0.98
ACTN1-216ENST00000556083 FAM186AA6NE01 2351 aa8.92□□□□□ -0.98
ACTN1-216ENST00000556083 ADAMTSL1Q8N6G6 1762 aa8.92□□□□□ -0.98
ACTN1-216ENST00000556083 J3QRE1 110 aa8.92□□□□□ -0.98
ACTN1-216ENST00000556083 IGHV1-46P01743 117 aa8.92□□□□□ -0.98
ACTN1-216ENST00000556083 NR2C2APQ86WQ0 139 aa8.92□□□□□ -0.98
ACTN1-216ENST00000556083 TSKUQ8WUA8 353 aa8.92□□□□□ -0.98
ACTN1-216ENST00000556083 MRPL16Q9NX20 251 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms