RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 TMBIM6P55061 237 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 UCP3P55916 312 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 RND3P61587 244 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 ZNF124Q15973 351 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 HAGHQ16775 308 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 H2BFWTQ7Z2G1 175 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 OR2C3Q8N628 320 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 UXS1Q8NBZ7 420 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 OR51S1Q8NGJ8 323 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 MCFD2Q8NI22 146 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 CD300LFQ8TDQ1 290 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 DYNLRB2Q8TF09 96 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 SCARB1Q8WTV0 552 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 RAB2BQ8WUD1 216 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 LSM10Q969L4 123 aaKnown RBP4.78□□□□□ -1.64
TMEM260-209ENST00000556079 PINX1Q96BK5 328 aaKnown RBP4.78□□□□□ -1.64
TMEM260-209ENST00000556079 SOSTQ9BQB4 213 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 NEURL2Q9BR09 285 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 KRTAP17-1Q9BYP8 105 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 C5orf66Q9H5L9 145 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 UBQLN2Q9UHD9 624 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 U3KQE9 123 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 V9GYH0 126 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 HECTD4Q9Y4D8 3996 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 VPS13DQ5THJ4 4388 aa4.77□□□□□ -1.65
TMEM260-209ENST00000556079 ANKRD20A5PA0PJZ0 165 aa4.77□□□□□ -1.65
TMEM260-209ENST00000556079 CCDC160A6NGH7 325 aa4.77□□□□□ -1.65
TMEM260-209ENST00000556079 MT-CO2P00403 227 aa4.77□□□□□ -1.65
TMEM260-209ENST00000556079 APOHP02749 345 aaPredicted RBP4.77□□□□□ -1.65
TMEM260-209ENST00000556079 CTSDP07339 412 aaPredicted RBP4.77□□□□□ -1.65
TMEM260-209ENST00000556079 LYL1P12980 280 aa4.77□□□□□ -1.65
TMEM260-209ENST00000556079 HIST1H1BP16401 226 aaKnown RBP4.77□□□□□ -1.65
TMEM260-209ENST00000556079 PTBP1P26599 531 aaKnown RBP eCLIP4.77□□□□□ -1.65
TMEM260-209ENST00000556079 AKR1C2P52895 323 aa4.77□□□□□ -1.65
TMEM260-209ENST00000556079 TAS2R19P59542 299 aa4.77□□□□□ -1.65
TMEM260-209ENST00000556079 PRCDQ00LT1 54 aa4.77□□□□□ -1.65
TMEM260-209ENST00000556079 ZNF79Q15937 498 aa4.77□□□□□ -1.65
TMEM260-209ENST00000556079 TRIM16LQ309B1 348 aa4.77□□□□□ -1.65
TMEM260-209ENST00000556079 Q56UQ5 140 aa4.77□□□□□ -1.65
TMEM260-209ENST00000556079 LCN12Q6JVE5 192 aa4.77□□□□□ -1.65
TMEM260-209ENST00000556079 PLET1Q6UQ28 207 aa4.77□□□□□ -1.65
TMEM260-209ENST00000556079 GPHB5Q86YW7 130 aa4.77□□□□□ -1.65
TMEM260-209ENST00000556079 SELENOHQ8IZQ5 122 aaKnown RBP4.77□□□□□ -1.65
TMEM260-209ENST00000556079 Q8N402 240 aa4.77□□□□□ -1.65
TMEM260-209ENST00000556079 ARRDC1Q8N5I2 433 aa4.77□□□□□ -1.65
TMEM260-209ENST00000556079 OR4A16Q8NH70 328 aa4.77□□□□□ -1.65
TMEM260-209ENST00000556079 TERB2Q8NHR7 220 aa4.77□□□□□ -1.65
TMEM260-209ENST00000556079 GLYATL2Q8WU03 294 aa4.77□□□□□ -1.65
TMEM260-209ENST00000556079 TMEM170AQ8WVE7 144 aa4.77□□□□□ -1.65
TMEM260-209ENST00000556079 TMEM190Q8WZ59 177 aa4.77□□□□□ -1.65
TMEM260-209ENST00000556079 TRIM63Q969Q1 353 aa4.77□□□□□ -1.65
TMEM260-209ENST00000556079 GPR146Q96CH1 333 aa4.77□□□□□ -1.65
TMEM260-209ENST00000556079 TM2D3Q9BRN9 247 aa4.77□□□□□ -1.65
TMEM260-209ENST00000556079 C20orf24Q9BUV8 137 aa4.77□□□□□ -1.65
TMEM260-209ENST00000556079 NXF2Q9GZY0 626 aaKnown RBP4.77□□□□□ -1.65
TMEM260-209ENST00000556079 FNDC4Q9H6D8 234 aaPredicted RBP4.77□□□□□ -1.65
TMEM260-209ENST00000556079 SRD5A3Q9H8P0 318 aa4.77□□□□□ -1.65
TMEM260-209ENST00000556079 C21orf62Q9NYP8 219 aa4.77□□□□□ -1.65
TMEM260-209ENST00000556079 PEMTQ9UBM1 199 aa4.77□□□□□ -1.65
TMEM260-209ENST00000556079 ZMAT5Q9UDW3 170 aaKnown RBP4.77□□□□□ -1.65
TMEM260-209ENST00000556079 PRNDQ9UKY0 176 aa4.77□□□□□ -1.65
TMEM260-209ENST00000556079 PCLOQ9Y6V0 5065 aa4.77□□□□□ -1.65
TMEM260-209ENST00000556079 IGKV3-7A0A075B6H7 116 aa4.76□□□□□ -1.65
TMEM260-209ENST00000556079 TRBV7-1A0A0A6YYK4 115 aa4.76□□□□□ -1.65
TMEM260-209ENST00000556079 A8MWP6 167 aa4.76□□□□□ -1.65
TMEM260-209ENST00000556079 LGALS9O00182 355 aa4.76□□□□□ -1.65
TMEM260-209ENST00000556079 CTSGP08311 255 aa4.76□□□□□ -1.65
TMEM260-209ENST00000556079 AKAIN1P0CW23 69 aa4.76□□□□□ -1.65
TMEM260-209ENST00000556079 RNASE2P10153 161 aaKnown RBP4.76□□□□□ -1.65
TMEM260-209ENST00000556079 UCP1P25874 307 aa4.76□□□□□ -1.65
TMEM260-209ENST00000556079 TFPI2P48307 235 aa4.76□□□□□ -1.65
TMEM260-209ENST00000556079 HOXA1P49639 335 aaPredicted RBP4.76□□□□□ -1.65
TMEM260-209ENST00000556079 HSPE1P61604 102 aaKnown RBP4.76□□□□□ -1.65
TMEM260-209ENST00000556079 SUPT4H1P63272 117 aaKnown RBP4.76□□□□□ -1.65
TMEM260-209ENST00000556079 KLF9Q13886 244 aaPredicted RBP4.76□□□□□ -1.65
TMEM260-209ENST00000556079 TATDN3Q17R31 274 aa4.76□□□□□ -1.65
TMEM260-209ENST00000556079 PYDC2Q56P42 97 aa4.76□□□□□ -1.65
TMEM260-209ENST00000556079 ZNF57Q68EA5 555 aaPredicted RBP4.76□□□□□ -1.65
TMEM260-209ENST00000556079 LINC00322Q6ZN03 302 aaPredicted RBP4.76□□□□□ -1.65
TMEM260-209ENST00000556079 SGPP2Q8IWX5 399 aa4.76□□□□□ -1.65
TMEM260-209ENST00000556079 SLC35G3Q8N808 338 aa4.76□□□□□ -1.65
TMEM260-209ENST00000556079 OR5B3Q8NH48 314 aa4.76□□□□□ -1.65
TMEM260-209ENST00000556079 VN1R17PQ8TDU5 208 aa4.76□□□□□ -1.65
TMEM260-209ENST00000556079 ZNF436Q9C0F3 470 aaPredicted RBP4.76□□□□□ -1.65
TMEM260-209ENST00000556079 NAA60Q9H7X0 242 aa4.76□□□□□ -1.65
TMEM260-209ENST00000556079 PALMDQ9NP74 551 aa4.76□□□□□ -1.65
TMEM260-209ENST00000556079 MCUBQ9NWR8 336 aa4.76□□□□□ -1.65
TMEM260-209ENST00000556079 SIGLEC8Q9NYZ4 499 aa4.76□□□□□ -1.65
TMEM260-209ENST00000556079 COPZ2Q9P299 210 aa4.76□□□□□ -1.65
TMEM260-209ENST00000556079 CACNG5Q9UF02 275 aa4.76□□□□□ -1.65
TMEM260-209ENST00000556079 GPR132Q9UNW8 380 aa4.76□□□□□ -1.65
TMEM260-209ENST00000556079 TEX13DA0A0J9YY54 714 aaPredicted RBP4.75□□□□□ -1.65
TMEM260-209ENST00000556079 A0A1B0GU03 582 aa4.75□□□□□ -1.65
TMEM260-209ENST00000556079 LINC00854A0A1B0GVQ3 168 aa4.75□□□□□ -1.65
TMEM260-209ENST00000556079 FABP12A6NFH5 140 aa4.75□□□□□ -1.65
TMEM260-209ENST00000556079 CRYM-AS1A6NIL9 109 aa4.75□□□□□ -1.65
TMEM260-209ENST00000556079 OR11H12B2RN74 326 aa4.75□□□□□ -1.65
TMEM260-209ENST00000556079 DISC1C4P0D8 188 aa4.75□□□□□ -1.65
TMEM260-209ENST00000556079 CTDSPLO15194 276 aa4.75□□□□□ -1.65
TMEM260-209ENST00000556079 GSTZ1O43708 216 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms