RNA–Protein interactions for RNA: ENST00000556071.5

LINC00871-202, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-202ENST00000556071 SPANXN3Q5MJ09 141 aa0.74□□□□□ -2.29
LINC00871-202ENST00000556071 ALKAL1Q6UXT8 129 aa0.74□□□□□ -2.29
LINC00871-202ENST00000556071 GINS4Q9BRT9 223 aa0.74□□□□□ -2.29
LINC00871-202ENST00000556071 CMTM6Q9NX76 183 aa0.74□□□□□ -2.29
LINC00871-202ENST00000556071 DOCK5Q9H7D0 1870 aa0.73□□□□□ -2.29
LINC00871-202ENST00000556071 HYPMO75409 117 aa0.73□□□□□ -2.29
LINC00871-202ENST00000556071 CD200R1LQ6Q8B3 271 aa0.73□□□□□ -2.29
LINC00871-202ENST00000556071 OOSP2Q86WS3 158 aa0.73□□□□□ -2.29
LINC00871-202ENST00000556071 PHF13Q86YI8 300 aaPredicted RBP0.73□□□□□ -2.29
LINC00871-202ENST00000556071 CLVS1Q8IUQ0 354 aaPredicted RBP0.73□□□□□ -2.29
LINC00871-202ENST00000556071 USE1Q9NZ43 259 aa0.73□□□□□ -2.29
LINC00871-202ENST00000556071 PIK3R4Q99570 1358 aa0.72□□□□□ -2.29
LINC00871-202ENST00000556071 OR1I1O60431 355 aa0.72□□□□□ -2.29
LINC00871-202ENST00000556071 HBA1P69905 142 aa0.72□□□□□ -2.29
LINC00871-202ENST00000556071 PDE6HQ13956 83 aa0.72□□□□□ -2.29
LINC00871-202ENST00000556071 KCNJ8Q15842 424 aa0.72□□□□□ -2.29
LINC00871-202ENST00000556071 LPCAT4Q643R3 524 aa0.72□□□□□ -2.29
LINC00871-202ENST00000556071 Q8N814 137 aa0.72□□□□□ -2.29
LINC00871-202ENST00000556071 ZNF418Q8TF45 676 aaPredicted RBP0.72□□□□□ -2.29
LINC00871-202ENST00000556071 LLPHQ9BRT6 129 aaKnown RBP0.72□□□□□ -2.29
LINC00871-202ENST00000556071 CNTRLQ7Z7A1 2325 aa0.72□□□□□ -2.29
LINC00871-202ENST00000556071 TRAV1-1A0A0B4J248 108 aa0.71□□□□□ -2.3
LINC00871-202ENST00000556071 EEF1E1-BLOC1S5C9J1V9 151 aa0.71□□□□□ -2.3
LINC00871-202ENST00000556071 OR2T1O43869 369 aa0.71□□□□□ -2.3
LINC00871-202ENST00000556071 ISG15P05161 165 aa0.71□□□□□ -2.3
LINC00871-202ENST00000556071 RAB4BP61018 213 aa0.71□□□□□ -2.3
LINC00871-202ENST00000556071 DPPA3Q6W0C5 159 aa0.71□□□□□ -2.3
LINC00871-202ENST00000556071 OR4E2Q8NGC2 313 aa0.71□□□□□ -2.3
LINC00871-202ENST00000556071 ATP6V1DQ9Y5K8 247 aa0.71□□□□□ -2.3
LINC00871-202ENST00000556071 TOPBP1Q92547 1522 aa0.7□□□□□ -2.3
LINC00871-202ENST00000556071 A0A0D9SG52 128 aa0.7□□□□□ -2.3
LINC00871-202ENST00000556071 AP2S1P53680 142 aaPredicted RBP0.7□□□□□ -2.3
LINC00871-202ENST00000556071 SPANXN5Q5MJ07 72 aa0.7□□□□□ -2.3
LINC00871-202ENST00000556071 MIR17HGQ75NE6 70 aa0.7□□□□□ -2.3
LINC00871-202ENST00000556071 OR5A1Q8NGJ0 315 aa0.7□□□□□ -2.3
LINC00871-202ENST00000556071 TERB2Q8NHR7 220 aa0.7□□□□□ -2.3
LINC00871-202ENST00000556071 LSM5Q9Y4Y9 91 aaKnown RBP0.7□□□□□ -2.3
LINC00871-202ENST00000556071 DENND4CQ5VZ89 1909 aa0.7□□□□□ -2.3
LINC00871-202ENST00000556071 USP24Q9UPU5 2620 aa0.69□□□□□ -2.3
LINC00871-202ENST00000556071 GOLGA6L19H0YKK7 550 aa0.69□□□□□ -2.3
LINC00871-202ENST00000556071 OR5G3P0C626 314 aa0.69□□□□□ -2.3
LINC00871-202ENST00000556071 MIFP14174 115 aa0.69□□□□□ -2.3
LINC00871-202ENST00000556071 LRRC25Q8N386 305 aaPredicted RBP0.69□□□□□ -2.3
LINC00871-202ENST00000556071 OR13C4Q8NGS5 318 aa0.69□□□□□ -2.3
LINC00871-202ENST00000556071 DNAJC9Q8WXX5 260 aa0.69□□□□□ -2.3
LINC00871-202ENST00000556071 SLC35B4Q969S0 331 aa0.69□□□□□ -2.3
LINC00871-202ENST00000556071 OPTNQ96CV9 577 aa0.69□□□□□ -2.3
LINC00871-202ENST00000556071 IMP4Q96G21 291 aaKnown RBP0.69□□□□□ -2.3
LINC00871-202ENST00000556071 TMEM147Q9BVK8 224 aa0.69□□□□□ -2.3
LINC00871-202ENST00000556071 ULBP3Q9BZM4 244 aa0.69□□□□□ -2.3
LINC00871-202ENST00000556071 FBXL12Q9NXK8 326 aa0.69□□□□□ -2.3
LINC00871-202ENST00000556071 MCM3APO60318 1980 aa0.68□□□□□ -2.3
LINC00871-202ENST00000556071 KHDC3LQ587J8 217 aa0.68□□□□□ -2.3
LINC00871-202ENST00000556071 HIST2H3PS2Q5TEC6 136 aa0.68□□□□□ -2.3
LINC00871-202ENST00000556071 C9orf84Q5VXU9 1444 aa0.68□□□□□ -2.3
LINC00871-202ENST00000556071 M0R2N4 97 aa0.67□□□□□ -2.3
LINC00871-202ENST00000556071 DCTN3O75935 186 aa0.67□□□□□ -2.3
LINC00871-202ENST00000556071 TPM3P06753 285 aa0.67□□□□□ -2.3
LINC00871-202ENST00000556071 CASQ1P31415 396 aa0.67□□□□□ -2.3
LINC00871-202ENST00000556071 SSR2P43308 183 aa0.67□□□□□ -2.3
LINC00871-202ENST00000556071 CNBPP62633 177 aaKnown RBP0.67□□□□□ -2.3
LINC00871-202ENST00000556071 RHEBQ15382 184 aa0.67□□□□□ -2.3
LINC00871-202ENST00000556071 TMEM86BQ8N661 226 aa0.67□□□□□ -2.3
LINC00871-202ENST00000556071 C11orf68Q9H3H3 251 aaKnown RBP0.67□□□□□ -2.3
LINC00871-202ENST00000556071 ACER3Q9NUN7 267 aa0.67□□□□□ -2.3
LINC00871-202ENST00000556071 DOCK3Q8IZD9 2030 aa0.67□□□□□ -2.3
LINC00871-202ENST00000556071 RIC1Q4ADV7 1423 aa0.66□□□□□ -2.3
LINC00871-202ENST00000556071 TRBV6-8A0A0A6YYG3 113 aa0.66□□□□□ -2.3
LINC00871-202ENST00000556071 TGOLN2O43493 480 aa0.66□□□□□ -2.3
LINC00871-202ENST00000556071 HLA-DRB1P01911 266 aa0.66□□□□□ -2.3
LINC00871-202ENST00000556071 COX6A1P12074 109 aa0.66□□□□□ -2.3
LINC00871-202ENST00000556071 RNASE10Q5GAN6 216 aaKnown RBP0.66□□□□□ -2.3
LINC00871-202ENST00000556071 GDF5OSQ5U4N7 250 aa0.66□□□□□ -2.3
LINC00871-202ENST00000556071 SBSPONQ8IVN8 264 aa0.66□□□□□ -2.3
LINC00871-202ENST00000556071 Q8N6K4 173 aa0.66□□□□□ -2.3
LINC00871-202ENST00000556071 PTH2Q96A98 100 aa0.66□□□□□ -2.3
LINC00871-202ENST00000556071 UBL3O95164 117 aa0.65□□□□□ -2.31
LINC00871-202ENST00000556071 H1FXQ92522 213 aaKnown RBP0.65□□□□□ -2.31
LINC00871-202ENST00000556071 NIPSNAP1Q9BPW8 284 aa0.65□□□□□ -2.31
LINC00871-202ENST00000556071 MIXL1Q9H2W2 232 aa0.65□□□□□ -2.31
LINC00871-202ENST00000556071 NKIRAS1Q9NYS0 192 aa0.65□□□□□ -2.31
LINC00871-202ENST00000556071 ASCC3Q8N3C0 2202 aaKnown RBP0.64□□□□□ -2.31
LINC00871-202ENST00000556071 TGIF2-C20orf24A0A0A6YYL0 155 aa0.64□□□□□ -2.31
LINC00871-202ENST00000556071 PQLC2LA1A4F0 135 aa0.64□□□□□ -2.31
LINC00871-202ENST00000556071 DPRXA6NFQ7 191 aa0.64□□□□□ -2.31
LINC00871-202ENST00000556071 BAALC-AS2P0C853 105 aa0.64□□□□□ -2.31
LINC00871-202ENST00000556071 TPM4P67936 248 aa0.64□□□□□ -2.31
LINC00871-202ENST00000556071 RHOGP84095 191 aa0.64□□□□□ -2.31
LINC00871-202ENST00000556071 KRTAP21-1Q3LI58 79 aa0.64□□□□□ -2.31
LINC00871-202ENST00000556071 SIGLECL1Q8N7X8 197 aa0.64□□□□□ -2.31
LINC00871-202ENST00000556071 SFT2D1Q8WV19 159 aa0.64□□□□□ -2.31
LINC00871-202ENST00000556071 PRTFDC1Q9NRG1 225 aa0.64□□□□□ -2.31
LINC00871-202ENST00000556071 TAS2R4Q9NYW5 299 aa0.64□□□□□ -2.31
LINC00871-202ENST00000556071 CASP8AP2Q9UKL3 1982 aa0.63□□□□□ -2.31
LINC00871-202ENST00000556071 BUB1B-PAK6H3BSN5 160 aa0.63□□□□□ -2.31
LINC00871-202ENST00000556071 FAAHO00519 579 aa0.63□□□□□ -2.31
LINC00871-202ENST00000556071 LYZL6O75951 148 aa0.63□□□□□ -2.31
LINC00871-202ENST00000556071 CALB1P05937 261 aa0.63□□□□□ -2.31
LINC00871-202ENST00000556071 MGST1P10620 155 aaKnown RBP0.63□□□□□ -2.31
LINC00871-202ENST00000556071 SNRPD2P62316 118 aaKnown RBP0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms