RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 PET100P0DJ07 73 aa5.94□□□□□ -1.46
TDP1-214ENST00000556063 RNASE2P10153 161 aaKnown RBP5.94□□□□□ -1.46
TDP1-214ENST00000556063 TAS2R30P59541 319 aa5.94□□□□□ -1.46
TDP1-214ENST00000556063 SRSF4Q08170 494 aaKnown RBP5.94□□□□□ -1.46
TDP1-214ENST00000556063 C15orf32Q32M92 178 aa5.94□□□□□ -1.46
TDP1-214ENST00000556063 C2orf83Q53S99 150 aa5.94□□□□□ -1.46
TDP1-214ENST00000556063 ETFRF1Q6IPR1 90 aa5.94□□□□□ -1.46
TDP1-214ENST00000556063 LCNL1Q6ZST4 164 aa5.94□□□□□ -1.46
TDP1-214ENST00000556063 RNASEH2CQ8TDP1 164 aaKnown RBP5.94□□□□□ -1.46
TDP1-214ENST00000556063 VN1R17PQ8TDU5 208 aa5.94□□□□□ -1.46
TDP1-214ENST00000556063 ASB13Q8WXK3 278 aa5.94□□□□□ -1.46
TDP1-214ENST00000556063 DPF1Q92782 380 aa5.94□□□□□ -1.46
TDP1-214ENST00000556063 MISP3Q96FF7 219 aa5.94□□□□□ -1.46
TDP1-214ENST00000556063 FANCD2OSQ96PS1 177 aa5.94□□□□□ -1.46
TDP1-214ENST00000556063 NMES1Q9C002 83 aa5.94□□□□□ -1.46
TDP1-214ENST00000556063 MAGT1Q9H0U3 335 aa5.94□□□□□ -1.46
TDP1-214ENST00000556063 RANGRFQ9HD47 186 aaPredicted RBP5.94□□□□□ -1.46
TDP1-214ENST00000556063 STRAPQ9Y3F4 350 aaKnown RBP5.94□□□□□ -1.46
TDP1-214ENST00000556063 NOTCH3Q9UM47 2321 aa5.94□□□□□ -1.46
TDP1-214ENST00000556063 SSSCA1O60232 199 aa5.93□□□□□ -1.46
TDP1-214ENST00000556063 NDUFB8O95169 186 aa5.93□□□□□ -1.46
TDP1-214ENST00000556063 IGHV3-11P01762 117 aa5.93□□□□□ -1.46
TDP1-214ENST00000556063 MBPP02686 304 aaPredicted RBP5.93□□□□□ -1.46
TDP1-214ENST00000556063 PF4P02776 101 aa5.93□□□□□ -1.46
TDP1-214ENST00000556063 OR8U8P0C7N1 319 aa5.93□□□□□ -1.46
TDP1-214ENST00000556063 IAPPP10997 89 aa5.93□□□□□ -1.46
TDP1-214ENST00000556063 ZP3P21754 424 aa5.93□□□□□ -1.46
TDP1-214ENST00000556063 MYCNOSP40205 109 aa5.93□□□□□ -1.46
TDP1-214ENST00000556063 OPRK1P41145 380 aa5.93□□□□□ -1.46
TDP1-214ENST00000556063 NPBWR1P48145 328 aa5.93□□□□□ -1.46
TDP1-214ENST00000556063 S100A10P60903 97 aa5.93□□□□□ -1.46
TDP1-214ENST00000556063 RRAS2P62070 204 aaPredicted RBP5.93□□□□□ -1.46
TDP1-214ENST00000556063 POLR2GP62487 172 aaKnown RBP eCLIP5.93□□□□□ -1.46
TDP1-214ENST00000556063 RUNX1Q01196 453 aa5.93□□□□□ -1.46
TDP1-214ENST00000556063 KIAA0141Q14154 515 aaPredicted RBP5.93□□□□□ -1.46
TDP1-214ENST00000556063 BSXQ3C1V8 233 aa5.93□□□□□ -1.46
TDP1-214ENST00000556063 ZNF343Q6P1L6 599 aa5.93□□□□□ -1.46
TDP1-214ENST00000556063 PINX1Q96BK5 328 aaKnown RBP5.93□□□□□ -1.46
TDP1-214ENST00000556063 SMIM8Q96KF7 97 aa5.93□□□□□ -1.46
TDP1-214ENST00000556063 ATP6V0BQ99437 205 aa5.93□□□□□ -1.46
TDP1-214ENST00000556063 C21orf62Q9NYP8 219 aa5.93□□□□□ -1.46
TDP1-214ENST00000556063 PSENENQ9NZ42 101 aa5.93□□□□□ -1.46
TDP1-214ENST00000556063 PEF1Q9UBV8 284 aaKnown RBP5.93□□□□□ -1.46
TDP1-214ENST00000556063 PAIP2BQ9ULR5 123 aaKnown RBP5.93□□□□□ -1.46
TDP1-214ENST00000556063 LSM5Q9Y4Y9 91 aaKnown RBP5.93□□□□□ -1.46
TDP1-214ENST00000556063 K7EPK0 472 aa5.92□□□□□ -1.46
TDP1-214ENST00000556063 CCL24O00175 119 aa5.92□□□□□ -1.46
TDP1-214ENST00000556063 TSC22D2O75157 780 aa5.92□□□□□ -1.46
TDP1-214ENST00000556063 SIX6O95475 246 aa5.92□□□□□ -1.46
TDP1-214ENST00000556063 MT-CO2P00403 227 aa5.92□□□□□ -1.46
TDP1-214ENST00000556063 HSPB1P04792 205 aaKnown RBP5.92□□□□□ -1.46
TDP1-214ENST00000556063 SLC25A4P12235 298 aa5.92□□□□□ -1.46
TDP1-214ENST00000556063 BCAP31P51572 246 aa5.92□□□□□ -1.46
TDP1-214ENST00000556063 MFAP4P55083 255 aa5.92□□□□□ -1.46
TDP1-214ENST00000556063 ZNF616Q08AN1 781 aa5.92□□□□□ -1.46
TDP1-214ENST00000556063 IL15RAQ13261 267 aa5.92□□□□□ -1.46
TDP1-214ENST00000556063 RAB32Q13637 225 aa5.92□□□□□ -1.46
TDP1-214ENST00000556063 FCN2Q15485 313 aa5.92□□□□□ -1.46
TDP1-214ENST00000556063 Q56UQ5 140 aa5.92□□□□□ -1.46
TDP1-214ENST00000556063 SPANXN5Q5MJ07 72 aa5.92□□□□□ -1.46
TDP1-214ENST00000556063 PVRIGQ6DKI7 326 aa5.92□□□□□ -1.46
TDP1-214ENST00000556063 ETV3LQ6ZN32 361 aa5.92□□□□□ -1.46
TDP1-214ENST00000556063 C19orf35Q6ZS72 473 aa5.92□□□□□ -1.46
TDP1-214ENST00000556063 C8orf86Q6ZUL3 223 aa5.92□□□□□ -1.46
TDP1-214ENST00000556063 OR1N2Q8NGR9 330 aa5.92□□□□□ -1.46
TDP1-214ENST00000556063 SCARB1Q8WTV0 552 aa5.92□□□□□ -1.46
TDP1-214ENST00000556063 CACNG8Q8WXS5 425 aa5.92□□□□□ -1.46
TDP1-214ENST00000556063 DCUN1D4Q92564 292 aa5.92□□□□□ -1.46
TDP1-214ENST00000556063 OR5B12Q96R08 314 aa5.92□□□□□ -1.46
TDP1-214ENST00000556063 TXN2Q99757 166 aa5.92□□□□□ -1.46
TDP1-214ENST00000556063 GNB4Q9HAV0 340 aa5.92□□□□□ -1.46
TDP1-214ENST00000556063 RCL1Q9Y2P8 373 aaKnown RBP5.92□□□□□ -1.46
TDP1-214ENST00000556063 TRAV30A0A087WSZ9 112 aa5.91□□□□□ -1.46
TDP1-214ENST00000556063 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.91□□□□□ -1.46
TDP1-214ENST00000556063 ANKRD34BA5PLL1 514 aa5.91□□□□□ -1.46
TDP1-214ENST00000556063 MFSD2BA6NFX1 497 aa5.91□□□□□ -1.46
TDP1-214ENST00000556063 C15orf62A8K5M9 175 aa5.91□□□□□ -1.46
TDP1-214ENST00000556063 ADARB2-AS1A8MUL3 147 aa5.91□□□□□ -1.46
TDP1-214ENST00000556063 E5RGE8 158 aa5.91□□□□□ -1.46
TDP1-214ENST00000556063 LINC01619G3V211 115 aa5.91□□□□□ -1.46
TDP1-214ENST00000556063 I3L2K1 104 aa5.91□□□□□ -1.46
TDP1-214ENST00000556063 I3L521 148 aa5.91□□□□□ -1.46
TDP1-214ENST00000556063 K7EIM0 57 aa5.91□□□□□ -1.46
TDP1-214ENST00000556063 NUPL2O15504 423 aaKnown RBP5.91□□□□□ -1.46
TDP1-214ENST00000556063 GNG7O60262 68 aa5.91□□□□□ -1.46
TDP1-214ENST00000556063 GGCTO75223 188 aaKnown RBP5.91□□□□□ -1.46
TDP1-214ENST00000556063 GIPP09681 153 aaPredicted RBP5.91□□□□□ -1.46
TDP1-214ENST00000556063 FCGR2BP31994 310 aaPredicted RBP5.91□□□□□ -1.46
TDP1-214ENST00000556063 GPX4P36969 197 aaPredicted RBP5.91□□□□□ -1.46
TDP1-214ENST00000556063 CAV2P51636 162 aa5.91□□□□□ -1.46
TDP1-214ENST00000556063 MFAP2P55001 183 aa5.91□□□□□ -1.46
TDP1-214ENST00000556063 H2BFSP57053 126 aa5.91□□□□□ -1.46
TDP1-214ENST00000556063 RAP2BP61225 183 aa5.91□□□□□ -1.46
TDP1-214ENST00000556063 FGL1Q08830 312 aa5.91□□□□□ -1.46
TDP1-214ENST00000556063 LRRC37A5PQ49AS3 106 aa5.91□□□□□ -1.46
TDP1-214ENST00000556063 ACSM6Q6P461 480 aa5.91□□□□□ -1.46
TDP1-214ENST00000556063 SPSB3Q6PJ21 355 aa5.91□□□□□ -1.46
TDP1-214ENST00000556063 CLEC19AQ6UXS0 136 aa5.91□□□□□ -1.46
TDP1-214ENST00000556063 OR11H1Q8NG94 326 aa5.91□□□□□ -1.46
TDP1-214ENST00000556063 THAP6Q8TBB0 222 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms