RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 C6orf62Q9GZU0 229 aaPredicted RBP9.41□□□□□ -0.9
HNRNPC-221ENST00000555883 KLK11Q9UBX7 282 aa9.41□□□□□ -0.9
HNRNPC-221ENST00000555883 MTFP1Q9UDX5 166 aa9.41□□□□□ -0.9
HNRNPC-221ENST00000555883 PLECQ15149 4684 aaKnown RBP9.4□□□□□ -0.9
HNRNPC-221ENST00000555883 TRAV14DV4A0A0A6YYC5 116 aa9.4□□□□□ -0.9
HNRNPC-221ENST00000555883 M0QYG6 137 aa9.4□□□□□ -0.9
HNRNPC-221ENST00000555883 CORTO00230 105 aa9.4□□□□□ -0.9
HNRNPC-221ENST00000555883 GNG7O60262 68 aa9.4□□□□□ -0.9
HNRNPC-221ENST00000555883 CD74P04233 296 aa9.4□□□□□ -0.9
HNRNPC-221ENST00000555883 CTSDP07339 412 aaPredicted RBP9.4□□□□□ -0.9
HNRNPC-221ENST00000555883 NPBWR1P48145 328 aa9.4□□□□□ -0.9
HNRNPC-221ENST00000555883 PIGPP57054 158 aa9.4□□□□□ -0.9
HNRNPC-221ENST00000555883 SSBP1Q04837 148 aaKnown RBP9.4□□□□□ -0.9
HNRNPC-221ENST00000555883 FAM90A2PQ658T7 463 aa9.4□□□□□ -0.9
HNRNPC-221ENST00000555883 RNF2Q99496 336 aa9.4□□□□□ -0.9
HNRNPC-221ENST00000555883 GINS3Q9BRX5 216 aa9.4□□□□□ -0.9
HNRNPC-221ENST00000555883 MAP6D1Q9H9H5 199 aa9.4□□□□□ -0.9
HNRNPC-221ENST00000555883 UBQLN2Q9UHD9 624 aa9.4□□□□□ -0.9
HNRNPC-221ENST00000555883 ALMS1Q8TCU4 4167 aa9.4□□□□□ -0.91
HNRNPC-221ENST00000555883 A0A0B4J293 547 aa9.39□□□□□ -0.91
HNRNPC-221ENST00000555883 C3orf85A0A1B0GTC6 90 aa9.39□□□□□ -0.91
HNRNPC-221ENST00000555883 NUPR2A6NF83 97 aa9.39□□□□□ -0.91
HNRNPC-221ENST00000555883 FAM25AB3EWG3 89 aa9.39□□□□□ -0.91
HNRNPC-221ENST00000555883 FAM25CB3EWG5 89 aa9.39□□□□□ -0.91
HNRNPC-221ENST00000555883 FAM25GB3EWG6 89 aa9.39□□□□□ -0.91
HNRNPC-221ENST00000555883 IGKV1-5P01602 117 aa9.39□□□□□ -0.91
HNRNPC-221ENST00000555883 CD3DP04234 171 aa9.39□□□□□ -0.91
HNRNPC-221ENST00000555883 PGAM2P15259 253 aa9.39□□□□□ -0.91
HNRNPC-221ENST00000555883 SNCAP37840 140 aa9.39□□□□□ -0.91
HNRNPC-221ENST00000555883 MRPS10P82664 201 aaKnown RBP9.39□□□□□ -0.91
HNRNPC-221ENST00000555883 AARDQ4LEZ3 155 aa9.39□□□□□ -0.91
HNRNPC-221ENST00000555883 LYG2Q86SG7 212 aa9.39□□□□□ -0.91
HNRNPC-221ENST00000555883 TMEM217Q8N7C4 229 aa9.39□□□□□ -0.91
HNRNPC-221ENST00000555883 CCDC71LQ8N9Z2 235 aa9.39□□□□□ -0.91
HNRNPC-221ENST00000555883 DUSP18Q8NEJ0 188 aa9.39□□□□□ -0.91
HNRNPC-221ENST00000555883 OR52I2Q8NH67 350 aa9.39□□□□□ -0.91
HNRNPC-221ENST00000555883 TERB2Q8NHR7 220 aa9.39□□□□□ -0.91
HNRNPC-221ENST00000555883 ZFAND1Q8TCF1 268 aa9.39□□□□□ -0.91
HNRNPC-221ENST00000555883 TP53RKQ96S44 253 aa9.39□□□□□ -0.91
HNRNPC-221ENST00000555883 VSIRQ9H7M9 311 aa9.39□□□□□ -0.91
HNRNPC-221ENST00000555883 BIRC6Q9NR09 4857 aa9.39□□□□□ -0.91
HNRNPC-221ENST00000555883 IGHV3OR16-8A0A075B7F1 116 aa9.38□□□□□ -0.91
HNRNPC-221ENST00000555883 TRAV2A0A0B4J234 112 aa9.38□□□□□ -0.91
HNRNPC-221ENST00000555883 A0A0J9YWU9 116 aa9.38□□□□□ -0.91
HNRNPC-221ENST00000555883 ZNF207O43670 478 aaKnown RBP9.38□□□□□ -0.91
HNRNPC-221ENST00000555883 YIF1AO95070 293 aa9.38□□□□□ -0.91
HNRNPC-221ENST00000555883 UCP1P25874 307 aa9.38□□□□□ -0.91
HNRNPC-221ENST00000555883 AKR1C2P52895 323 aa9.38□□□□□ -0.91
HNRNPC-221ENST00000555883 SUB1P53999 127 aaKnown RBP eCLIP9.38□□□□□ -0.912e-7■□□□□ 10.2
HNRNPC-221ENST00000555883 TAS2R19P59542 299 aa9.38□□□□□ -0.91
HNRNPC-221ENST00000555883 PAFAH1B2P68402 229 aa9.38□□□□□ -0.91
HNRNPC-221ENST00000555883 DEFB135Q30KP9 77 aa9.38□□□□□ -0.91
HNRNPC-221ENST00000555883 ZNF600Q6ZNG1 722 aa9.38□□□□□ -0.91
HNRNPC-221ENST00000555883 FAM219AQ8IW50 185 aa9.38□□□□□ -0.91
HNRNPC-221ENST00000555883 SLC35G3Q8N808 338 aa9.38□□□□□ -0.91
HNRNPC-221ENST00000555883 TMEM229BQ8NBD8 167 aa9.38□□□□□ -0.91
HNRNPC-221ENST00000555883 GATAD1Q8WUU5 269 aa9.38□□□□□ -0.91
HNRNPC-221ENST00000555883 ABHD1Q96SE0 405 aa9.38□□□□□ -0.91
HNRNPC-221ENST00000555883 PDCD10Q9BUL8 212 aa9.38□□□□□ -0.91
HNRNPC-221ENST00000555883 EXTL2Q9UBQ6 330 aa9.38□□□□□ -0.91
HNRNPC-221ENST00000555883 GABARAPH6UMI1 98 aa9.37□□□□□ -0.91
HNRNPC-221ENST00000555883 ST8SIA3O43173 380 aa9.37□□□□□ -0.91
HNRNPC-221ENST00000555883 DFFBO76075 338 aa9.37□□□□□ -0.91
HNRNPC-221ENST00000555883 SMIM18P0DKX4 95 aa9.37□□□□□ -0.91
HNRNPC-221ENST00000555883 RPL5P46777 297 aaKnown RBP9.37□□□□□ -0.91
HNRNPC-221ENST00000555883 SURF2Q15527 256 aaPredicted RBP9.37□□□□□ -0.91
HNRNPC-221ENST00000555883 BSXQ3C1V8 233 aa9.37□□□□□ -0.91
HNRNPC-221ENST00000555883 GPR107Q5VW38 600 aa9.37□□□□□ -0.91
HNRNPC-221ENST00000555883 TOMM20LQ6UXN7 152 aa9.37□□□□□ -0.91
HNRNPC-221ENST00000555883 LINC00476Q8WZB0 136 aa9.37□□□□□ -0.91
HNRNPC-221ENST00000555883 PINX1Q96BK5 328 aaKnown RBP9.37□□□□□ -0.91
HNRNPC-221ENST00000555883 ZFAND3Q9H8U3 227 aa9.37□□□□□ -0.91
HNRNPC-221ENST00000555883 COPZ2Q9P299 210 aa9.37□□□□□ -0.91
HNRNPC-221ENST00000555883 SCGB2A1O75556 95 aa9.36□□□□□ -0.91
HNRNPC-221ENST00000555883 TMEM50AO95807 157 aa9.36□□□□□ -0.91
HNRNPC-221ENST00000555883 IFNA17P01571 189 aa9.36□□□□□ -0.91
HNRNPC-221ENST00000555883 PI3P19957 117 aa9.36□□□□□ -0.91
HNRNPC-221ENST00000555883 MEF2DQ14814 521 aa9.36□□□□□ -0.91
HNRNPC-221ENST00000555883 IZUMO4Q1ZYL8 232 aa9.36□□□□□ -0.91
HNRNPC-221ENST00000555883 STEAP1BQ6NZ63 245 aa9.36□□□□□ -0.91
HNRNPC-221ENST00000555883 CEMP1Q6PRD7 247 aaPredicted RBP9.36□□□□□ -0.91
HNRNPC-221ENST00000555883 OR13C8Q8NGS7 320 aa9.36□□□□□ -0.91
HNRNPC-221ENST00000555883 OR52E5Q8NH55 327 aa9.36□□□□□ -0.91
HNRNPC-221ENST00000555883 RRNAD1Q96FB5 475 aaKnown RBP9.36□□□□□ -0.91
HNRNPC-221ENST00000555883 NAA50Q9GZZ1 169 aaKnown RBP9.36□□□□□ -0.91
HNRNPC-221ENST00000555883 CSTL1Q9H114 145 aa9.36□□□□□ -0.91
HNRNPC-221ENST00000555883 TMEM231Q9H6L2 316 aa9.36□□□□□ -0.91
HNRNPC-221ENST00000555883 RABL2AQ9UBK7 228 aaPredicted RBP9.36□□□□□ -0.91
HNRNPC-221ENST00000555883 CACFD1Q9UGQ2 172 aa9.36□□□□□ -0.91
HNRNPC-221ENST00000555883 RABL2BQ9UNT1 228 aa9.36□□□□□ -0.91
HNRNPC-221ENST00000555883 CXorf65A6NEN9 183 aa9.35□□□□□ -0.91
HNRNPC-221ENST00000555883 MPTX1A8MV57 137 aa9.35□□□□□ -0.91
HNRNPC-221ENST00000555883 CLN5O75503 358 aa9.35□□□□□ -0.91
HNRNPC-221ENST00000555883 CDS2O95674 445 aa9.35□□□□□ -0.91
HNRNPC-221ENST00000555883 RAB3DO95716 219 aa9.35□□□□□ -0.91
HNRNPC-221ENST00000555883 IGHV3-48P01763 117 aa9.35□□□□□ -0.91
HNRNPC-221ENST00000555883 RNASE2P10153 161 aaKnown RBP9.35□□□□□ -0.91
HNRNPC-221ENST00000555883 PPP5CP53041 499 aa9.35□□□□□ -0.91
HNRNPC-221ENST00000555883 TRIM16LQ309B1 348 aa9.35□□□□□ -0.91
HNRNPC-221ENST00000555883 TCF24Q7RTU0 167 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms