RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 IGHV4-34P06331 123 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 HIST1H2BJP06899 126 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 SPINK8P0C7L1 97 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 IFITM1P13164 125 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 CPMP14384 443 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 GABRG2P18507 467 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 CXCL3P19876 107 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 HIST1H2BOP23527 126 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 PSMB8P28062 276 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 HIST1H2BBP33778 126 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 PRSS3P35030 304 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 PPP1CCP36873 323 aaKnown RBP2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 FOXA1P55317 472 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 HIST1H2BDP58876 126 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 HIST1H2BCP62807 126 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 RPS24P62847 133 aaKnown RBP2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 GNB2P62879 340 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 PLGLB1Q02325 96 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 Q0VG73 95 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 HIST2H2BEQ16778 126 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 TMEM255AQ5JRV8 349 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 AADACL3Q5VUY0 350 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 Q5XG85 94 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 DNAJC24Q6P3W2 148 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 LCN15Q6UWW0 184 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 SSX8Q7RTT4 187 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 SGPP2Q8IWX5 399 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 NPWQ8N729 165 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 OR51G1Q8NGK1 321 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 OR2T27Q8NH04 317 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 OR10AC1Q8NH08 325 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 SRSF12Q8WXF0 261 aaKnown RBP2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 HIST1H2BHQ93079 126 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 DYNLL2Q96FJ2 89 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 YPEL4Q96NS1 127 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 LINC01587Q99440 93 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 HIST1H2BNQ99877 126 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 HIST1H2BMQ99879 126 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 ADAT1Q9BUB4 502 aaKnown RBP2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 TMEM147Q9BVK8 224 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 MRPL20Q9BYC9 149 aaKnown RBP2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 PARP12Q9H0J9 701 aaKnown RBP2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 PARP11Q9NR21 331 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 KCNIP2Q9NS61 270 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 FKBP11Q9NYL4 201 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 DEC1Q9P2X7 70 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 WASHC3Q9Y3C0 194 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 ENPP4Q9Y6X5 453 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 KIF25-AS1Q9Y6Z4 181 aa2.09□□□□□ -2.07
MTHFD1-212ENST00000555858 SIPA1L1O43166 1804 aa2.09□□□□□ -2.08
MTHFD1-212ENST00000555858 DENND4AQ7Z401 1863 aa2.09□□□□□ -2.08
MTHFD1-212ENST00000555858 CRB1P82279 1406 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 POLR1AO95602 1720 aaPredicted RBP2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 SUPT6HQ7KZ85 1726 aaKnown RBP2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 ADGRL1O94910 1474 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 ABCC1P33527 1531 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 ATP7AQ04656 1500 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 LOC102724200A0A096LPH7 203 aaPredicted RBP2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 TRAV8-4A0A0B4J246 113 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 TRAV4A0A0B4J268 109 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 ZNF850A8MQ14 1090 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 ZNF705GA8MUZ8 300 aaPredicted RBP2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 TMEM262E9PQX1 116 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 LINC01619G3V211 115 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 H3BQ15 152 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 J3QQQ9 107 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 P01737 135 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 HLA-DRB1P01911 266 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 EIF4EP06730 217 aaKnown RBP2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 MMP7P09237 267 aaPredicted RBP2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 IGLC6P0CF74 106 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 LINC00694P0DN24 101 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 CXCL2P19875 107 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 CRYGSP22914 178 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 NMUP48645 174 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 ZNF138P52744 262 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 RBM11P57052 281 aaKnown RBP2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 MTPNP58546 118 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 YPEL3P61236 119 aaPredicted RBP2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 HERVK_113P61574 105 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 DAD1P61803 113 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 SEC11AP67812 179 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 HBG1P69891 147 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 HBG2P69892 147 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 PRR3P79522 188 aaKnown RBP2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 AKR1C1Q04828 323 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 PRDX1Q06830 199 aaKnown RBP2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 SLC38A11Q08AI6 406 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 CATR1Q13166 79 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 EIF3IQ13347 325 aaKnown RBP2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 ZNF345Q14585 488 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 MSMO1Q15800 293 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 KRTAP27-1Q3LI81 207 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 MEIG1Q5JSS6 88 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 Q6AWC8 147 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 XAF1Q6GPH4 301 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 UNQ5815/PRO19632Q6UWF5 114 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 IGFL2Q6UWQ7 119 aa2.08□□□□□ -2.08
MTHFD1-212ENST00000555858 LYPD2Q6UXB3 125 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms