RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 NUPL2O15504 423 aaKnown RBP13.82□□□□□ -0.2
NEDD1-208ENST00000555806 ST8SIA3O43173 380 aa13.82□□□□□ -0.2
NEDD1-208ENST00000555806 B3GALNT1O75752 331 aa13.82□□□□□ -0.2
NEDD1-208ENST00000555806 MT-CO2P00403 227 aa13.82□□□□□ -0.2
NEDD1-208ENST00000555806 OR5AC1P0C628 307 aa13.82□□□□□ -0.2
NEDD1-208ENST00000555806 P0C879 139 aa13.82□□□□□ -0.2
NEDD1-208ENST00000555806 SNCAP37840 140 aa13.82□□□□□ -0.2
NEDD1-208ENST00000555806 MFAP4P55083 255 aa13.82□□□□□ -0.2
NEDD1-208ENST00000555806 ANKRD55Q3KP44 614 aa13.82□□□□□ -0.2
NEDD1-208ENST00000555806 MCFD2Q8NI22 146 aa13.82□□□□□ -0.2
NEDD1-208ENST00000555806 CITED4Q96RK1 184 aa13.82□□□□□ -0.2
NEDD1-208ENST00000555806 RSL24D1Q9UHA3 163 aaKnown RBP13.82□□□□□ -0.2
NEDD1-208ENST00000555806 KMT2CQ8NEZ4 4911 aaKnown RBP13.82□□□□□ -0.2
NEDD1-208ENST00000555806 ZNF207O43670 478 aaKnown RBP13.81□□□□□ -0.2
NEDD1-208ENST00000555806 IGHV3-48P01763 117 aa13.81□□□□□ -0.2
NEDD1-208ENST00000555806 HOXA1P49639 335 aaPredicted RBP13.81□□□□□ -0.2
NEDD1-208ENST00000555806 RELQ04864 619 aaPredicted RBP13.81□□□□□ -0.2
NEDD1-208ENST00000555806 SURF2Q15527 256 aaPredicted RBP13.81□□□□□ -0.2
NEDD1-208ENST00000555806 PRRT1Q99946 306 aa13.81□□□□□ -0.2
NEDD1-208ENST00000555806 RTBDNQ9BSG5 229 aaPredicted RBP13.81□□□□□ -0.2
NEDD1-208ENST00000555806 C5orf66Q9H5L9 145 aa13.81□□□□□ -0.2
NEDD1-208ENST00000555806 NAA60Q9H7X0 242 aa13.81□□□□□ -0.2
NEDD1-208ENST00000555806 ENY2Q9NPA8 101 aa13.81□□□□□ -0.2
NEDD1-208ENST00000555806 A0A0G2JRQ6 117 aa13.8□□□□□ -0.2
NEDD1-208ENST00000555806 RBMY1BA6NDE4 496 aaKnown RBP13.8□□□□□ -0.2
NEDD1-208ENST00000555806 RBMY1EA6NEQ0 496 aaKnown RBP13.8□□□□□ -0.2
NEDD1-208ENST00000555806 FABP12A6NFH5 140 aa13.8□□□□□ -0.2
NEDD1-208ENST00000555806 CCDC160A6NGH7 325 aa13.8□□□□□ -0.2
NEDD1-208ENST00000555806 GSTZ1O43708 216 aaPredicted RBP13.8□□□□□ -0.2
NEDD1-208ENST00000555806 YIF1AO95070 293 aa13.8□□□□□ -0.2
NEDD1-208ENST00000555806 CTSGP08311 255 aa13.8□□□□□ -0.2
NEDD1-208ENST00000555806 RBMY1DP0C7P1 496 aaKnown RBP13.8□□□□□ -0.2
NEDD1-208ENST00000555806 TNFSF8P32971 234 aa13.8□□□□□ -0.2
NEDD1-208ENST00000555806 ETV6P41212 452 aa13.8□□□□□ -0.2
NEDD1-208ENST00000555806 LINC00322Q6ZN03 302 aaPredicted RBP13.8□□□□□ -0.2
NEDD1-208ENST00000555806 OR51S1Q8NGJ8 323 aa13.8□□□□□ -0.2
NEDD1-208ENST00000555806 TXN2Q99757 166 aa13.8□□□□□ -0.2
NEDD1-208ENST00000555806 TMEM222Q9H0R3 208 aa13.8□□□□□ -0.2
NEDD1-208ENST00000555806 RETNQ9HD89 108 aa13.8□□□□□ -0.2
NEDD1-208ENST00000555806 ANKRD20A5PA0PJZ0 165 aa13.79□□□□□ -0.2
NEDD1-208ENST00000555806 GNG7O60262 68 aa13.79□□□□□ -0.2
NEDD1-208ENST00000555806 FCGR2BP31994 310 aaPredicted RBP13.79□□□□□ -0.2
NEDD1-208ENST00000555806 LAMTOR1Q6IAA8 161 aa13.79□□□□□ -0.2
NEDD1-208ENST00000555806 MCUBQ9NWR8 336 aa13.79□□□□□ -0.2
NEDD1-208ENST00000555806 SCP2D1Q9UJQ7 156 aa13.79□□□□□ -0.2
NEDD1-208ENST00000555806 GPR132Q9UNW8 380 aa13.79□□□□□ -0.2
NEDD1-208ENST00000555806 C15orf62A8K5M9 175 aa13.78□□□□□ -0.2
NEDD1-208ENST00000555806 K7EMT4 169 aa13.78□□□□□ -0.2
NEDD1-208ENST00000555806 CDS2O95674 445 aa13.78□□□□□ -0.2
NEDD1-208ENST00000555806 LYL1P12980 280 aa13.78□□□□□ -0.2
NEDD1-208ENST00000555806 SUB1P53999 127 aaKnown RBP eCLIP13.78□□□□□ -0.2
NEDD1-208ENST00000555806 DHODHQ02127 395 aa13.78□□□□□ -0.2
NEDD1-208ENST00000555806 FAM219AQ8IW50 185 aa13.78□□□□□ -0.2
NEDD1-208ENST00000555806 LHFPL5Q8TAF8 219 aa13.78□□□□□ -0.2
NEDD1-208ENST00000555806 GLYATL2Q8WU03 294 aa13.78□□□□□ -0.2
NEDD1-208ENST00000555806 RBPMSQ93062 196 aaKnown RBP13.78□□□□□ -0.2
NEDD1-208ENST00000555806 SPAG8Q99932 426 aaPredicted RBP13.78□□□□□ -0.2
NEDD1-208ENST00000555806 NXF2Q9GZY0 626 aaKnown RBP13.78□□□□□ -0.2
NEDD1-208ENST00000555806 HIPK2Q9H2X6 1198 aa13.78□□□□□ -0.2
NEDD1-208ENST00000555806 NBEAL2Q6ZNJ1 2754 aa13.78□□□□□ -0.2
NEDD1-208ENST00000555806 DNAH7Q8WXX0 4024 aa13.78□□□□□ -0.2
NEDD1-208ENST00000555806 CRYM-AS1A6NIL9 109 aa13.77□□□□□ -0.21
NEDD1-208ENST00000555806 INS-IGF2F8WCM5 200 aa13.77□□□□□ -0.21
NEDD1-208ENST00000555806 NPBWR1P48145 328 aa13.77□□□□□ -0.21
NEDD1-208ENST00000555806 CASC10Q5T4H9 136 aa13.77□□□□□ -0.21
NEDD1-208ENST00000555806 TMEM268Q5VZI3 342 aa13.77□□□□□ -0.21
NEDD1-208ENST00000555806 SELENOHQ8IZQ5 122 aaKnown RBP13.77□□□□□ -0.21
NEDD1-208ENST00000555806 DUSP18Q8NEJ0 188 aa13.77□□□□□ -0.21
NEDD1-208ENST00000555806 FAM110AQ9BQ89 295 aa13.77□□□□□ -0.21
NEDD1-208ENST00000555806 EDA2RQ9HAV5 297 aa13.77□□□□□ -0.21
NEDD1-208ENST00000555806 CORTO00230 105 aa13.76□□□□□ -0.21
NEDD1-208ENST00000555806 TSPAN4O14817 238 aa13.76□□□□□ -0.21
NEDD1-208ENST00000555806 RNASE2P10153 161 aaKnown RBP13.76□□□□□ -0.21
NEDD1-208ENST00000555806 Q6ZRM9 215 aa13.76□□□□□ -0.21
NEDD1-208ENST00000555806 SCGB3A2Q96PL1 93 aa13.76□□□□□ -0.21
NEDD1-208ENST00000555806 SOSTQ9BQB4 213 aa13.76□□□□□ -0.21
NEDD1-208ENST00000555806 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.76□□□□□ -0.21
NEDD1-208ENST00000555806 CACNG5Q9UF02 275 aa13.76□□□□□ -0.21
NEDD1-208ENST00000555806 IGHV3-49A0A0A0MS15 119 aa13.75□□□□□ -0.21
NEDD1-208ENST00000555806 IGHV7-4-1A0A0J9YVY3 117 aa13.75□□□□□ -0.21
NEDD1-208ENST00000555806 SPCS3P61009 180 aa13.75□□□□□ -0.21
NEDD1-208ENST00000555806 PYDC2Q56P42 97 aa13.75□□□□□ -0.21
NEDD1-208ENST00000555806 ZFAND6Q6FIF0 208 aa13.75□□□□□ -0.21
NEDD1-208ENST00000555806 TMEM116Q8NCL8 245 aa13.75□□□□□ -0.21
NEDD1-208ENST00000555806 ZNF414Q96IQ9 312 aa13.75□□□□□ -0.21
NEDD1-208ENST00000555806 GGTLC1Q9BX51 225 aa13.75□□□□□ -0.21
NEDD1-208ENST00000555806 UBQLN2Q9UHD9 624 aa13.75□□□□□ -0.21
NEDD1-208ENST00000555806 SMPXQ9UHP9 88 aa13.75□□□□□ -0.21
NEDD1-208ENST00000555806 KCNIP3Q9Y2W7 256 aa13.75□□□□□ -0.21
NEDD1-208ENST00000555806 LOC102724200A0A096LPH7 203 aaPredicted RBP13.74□□□□□ -0.21
NEDD1-208ENST00000555806 OR4C46A6NHA9 309 aa13.74□□□□□ -0.21
NEDD1-208ENST00000555806 FAUP35544 74 aaKnown RBP13.74□□□□□ -0.21
NEDD1-208ENST00000555806 OPRK1P41145 380 aa13.74□□□□□ -0.21
NEDD1-208ENST00000555806 GPR146Q96CH1 333 aa13.74□□□□□ -0.21
NEDD1-208ENST00000555806 OR10C1Q96KK4 312 aa13.74□□□□□ -0.21
NEDD1-208ENST00000555806 GINS3Q9BRX5 216 aa13.74□□□□□ -0.21
NEDD1-208ENST00000555806 RHPN1-AS1Q9BWJ2 59 aa13.74□□□□□ -0.21
NEDD1-208ENST00000555806 TRAV14DV4A0A0A6YYC5 116 aa13.73□□□□□ -0.21
NEDD1-208ENST00000555806 CEBPZOSA8MTT3 80 aa13.73□□□□□ -0.21
NEDD1-208ENST00000555806 AKR1C4P17516 323 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms