RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 C11orf71Q6IPW1 123 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 LINC00299Q6ZSB3 139 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 GOLT1AQ6ZVE7 132 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 TMEM150AQ86TG1 271 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 NAA40Q86UY6 237 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 OOSP2Q86WS3 158 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 SNX29P2Q8IUI4 249 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 H1FOOQ8IZA3 346 aaPredicted RBP2.26□□□□□ -2.05
SRP54-209ENST00000555746 C1orf158Q8N1D5 194 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 PACRGLQ8N7B6 248 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 TCTEX1D1Q8N7M0 179 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 OR52L1Q8NGH7 329 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 OR5A2Q8NGI9 324 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 OR5AR1Q8NGP9 310 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 OR2G3Q8NGZ4 309 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 OR5W2Q8NH69 310 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 OR5K1Q8NHB7 308 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 RXFP2Q8WXD0 754 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 OR5P3Q8WZ94 311 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 ARPC1AQ92747 370 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 HIST1H2BAQ96A08 127 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 UBE2E2Q96LR5 201 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 SNHG12Q9BXW3 62 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 SMIM3Q9BZL3 60 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 SELENOIQ9C0D9 397 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 LPAR5Q9H1C0 372 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 POPDC3Q9HBV1 291 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 LHX9Q9NQ69 397 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 ACER3Q9NUN7 267 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 UQCC1Q9NVA1 299 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 MED9Q9NWA0 146 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 NAT8BQ9UHF3 227 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 PRNDQ9UKY0 176 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 MCTS1Q9ULC4 181 aaKnown RBP2.26□□□□□ -2.05
SRP54-209ENST00000555746 LAMTOR2Q9Y2Q5 125 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 UBIAD1Q9Y5Z9 338 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 NACAE9PAV3 2078 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 PLCE1Q9P212 2302 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 DNAJC13O75165 2243 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 IGKV6D-21A0A0A0MT36 114 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 TRAV38-1A0A0B4J264 116 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 IGHV2OR16-5A0A0B4J2B6 119 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 A0A0J9YXY3 114 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 PNMA8CA0A1B0GUJ8 204 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 IFITM5A6NNB3 132 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 EEF1E1-BLOC1S5C9J1V9 151 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 H7C1C5 153 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 PANO1I0J062 215 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 UPK1AO00322 258 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 CCL25O15444 150 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 RBFOX2O43251 390 aaKnown RBP eCLIP2.25□□□□□ -2.05
SRP54-209ENST00000555746 EEF1E1O43324 174 aaKnown RBP2.25□□□□□ -2.05
SRP54-209ENST00000555746 YIF1AO95070 293 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 HPRT1P00492 218 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 MOSP00540 346 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 IFNA7P01567 189 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 FABP3P05413 133 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 ORM2P19652 201 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 CRHBPP24387 322 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 KDELR1P24390 212 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 DRD3P35462 400 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 FABP6P51161 128 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 SUB1P53999 127 aaKnown RBP eCLIP2.25□□□□□ -2.05
SRP54-209ENST00000555746 LCN6P62502 163 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 GNGT1P63211 74 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 GNG5P63218 68 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 SLC35A1P78382 337 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 PSG7Q13046 419 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 RGNQ15493 299 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 BATFQ16520 125 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 CEACAM16Q2WEN9 425 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 MORN2Q502X0 79 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 CLLU1Q5K131 121 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 ZNF684Q5T5D7 378 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 OR8I2Q8N0Y5 310 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 NKAPP1Q8N9T2 125 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 LINC01555Q8NAE3 123 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 OR1S1Q8NH92 325 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 ZFAND1Q8TCF1 268 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 ZNF418Q8TF45 676 aaPredicted RBP2.25□□□□□ -2.05
SRP54-209ENST00000555746 THEM6Q8WUY1 208 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 TMEM101Q96IK0 257 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 SEC22AQ96IW7 307 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 SMIM8Q96KF7 97 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 BMFQ96LC9 184 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 LINC00477Q96M19 166 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 PITX2Q99697 317 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 KCTD14Q9BQ13 255 aaPredicted RBP2.25□□□□□ -2.05
SRP54-209ENST00000555746 NDFIP1Q9BT67 221 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 EMC6Q9BV81 110 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 ZNF471Q9BX82 626 aaPredicted RBP2.25□□□□□ -2.05
SRP54-209ENST00000555746 OR2D2Q9H210 308 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 OR51I2Q9H344 312 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 CDC42EP4Q9H3Q1 356 aaKnown RBP2.25□□□□□ -2.05
SRP54-209ENST00000555746 UBQLN4Q9NRR5 601 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 RBM22Q9NW64 420 aaKnown RBP eCLIP2.25□□□□□ -2.05
SRP54-209ENST00000555746 RBFOX1Q9NWB1 397 aaKnown RBP2.25□□□□□ -2.05
SRP54-209ENST00000555746 TAS2R5Q9NYW4 299 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 DNAJC27Q9NZQ0 273 aa2.25□□□□□ -2.05
SRP54-209ENST00000555746 RPS6KB2Q9UBS0 482 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms