RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 SRD5A1P18405 259 aa8.05□□□□□ -1.12
SRP54-208ENST00000555557 ASPHD1Q5U4P2 390 aa8.05□□□□□ -1.12
SRP54-208ENST00000555557 ETV3LQ6ZN32 361 aa8.05□□□□□ -1.12
SRP54-208ENST00000555557 CLRN3Q8NCR9 226 aa8.05□□□□□ -1.12
SRP54-208ENST00000555557 SAV1Q9H4B6 383 aaPredicted RBP8.05□□□□□ -1.12
SRP54-208ENST00000555557 CYTL1Q9NRR1 136 aa8.05□□□□□ -1.12
SRP54-208ENST00000555557 INS-IGF2F8WCM5 200 aa8.05□□□□□ -1.12
SRP54-208ENST00000555557 BCL2L11O43521 198 aa8.05□□□□□ -1.12
SRP54-208ENST00000555557 PRH1P02810 166 aa8.05□□□□□ -1.12
SRP54-208ENST00000555557 MFAP2P55001 183 aa8.05□□□□□ -1.12
SRP54-208ENST00000555557 RPP30P78346 268 aaKnown RBP8.05□□□□□ -1.12
SRP54-208ENST00000555557 BAXQ07812 192 aa8.05□□□□□ -1.12
SRP54-208ENST00000555557 MLANAQ16655 118 aa8.05□□□□□ -1.12
SRP54-208ENST00000555557 BSXQ3C1V8 233 aa8.05□□□□□ -1.12
SRP54-208ENST00000555557 RPL7L1Q6DKI1 246 aaKnown RBP8.05□□□□□ -1.12
SRP54-208ENST00000555557 RBMS3Q6XE24 437 aaKnown RBP8.05□□□□□ -1.12
SRP54-208ENST00000555557 OR10P1Q8NGE3 313 aa8.05□□□□□ -1.12
SRP54-208ENST00000555557 PCNPQ8WW12 178 aaKnown RBP8.05□□□□□ -1.12
SRP54-208ENST00000555557 TAF15Q92804 592 aaKnown RBP eCLIP8.05□□□□□ -1.12
SRP54-208ENST00000555557 ZNF471Q9BX82 626 aaPredicted RBP8.05□□□□□ -1.12
SRP54-208ENST00000555557 G3V318 75 aa8.04□□□□□ -1.12
SRP54-208ENST00000555557 LY86O95711 162 aa8.04□□□□□ -1.12
SRP54-208ENST00000555557 RAB11AP62491 216 aa8.04□□□□□ -1.12
SRP54-208ENST00000555557 ECSCRQ19T08 205 aa8.04□□□□□ -1.12
SRP54-208ENST00000555557 C2orf83Q53S99 150 aa8.04□□□□□ -1.12
SRP54-208ENST00000555557 C16orf82Q7Z2V1 217 aa8.04□□□□□ -1.12
SRP54-208ENST00000555557 HSD17B13Q7Z5P4 300 aaPredicted RBP8.04□□□□□ -1.12
SRP54-208ENST00000555557 OR5T1Q8NG75 326 aa8.04□□□□□ -1.12
SRP54-208ENST00000555557 OR1S2Q8NGQ3 325 aa8.04□□□□□ -1.12
SRP54-208ENST00000555557 SGMS2Q8NHU3 365 aa8.04□□□□□ -1.12
SRP54-208ENST00000555557 WNT10AQ9GZT5 417 aa8.04□□□□□ -1.12
SRP54-208ENST00000555557 ESM1Q9NQ30 184 aa8.04□□□□□ -1.12
SRP54-208ENST00000555557 CDC42EP3Q9UKI2 254 aa8.04□□□□□ -1.12
SRP54-208ENST00000555557 DMRT1Q9Y5R6 373 aa8.04□□□□□ -1.12
SRP54-208ENST00000555557 IGHV3-21A0A0B4J1V1 117 aa8.03□□□□□ -1.12
SRP54-208ENST00000555557 PRSS46E5RG02 174 aa8.03□□□□□ -1.12
SRP54-208ENST00000555557 M0QZK8 103 aa8.03□□□□□ -1.12
SRP54-208ENST00000555557 IGHV3-48P01763 117 aa8.03□□□□□ -1.12
SRP54-208ENST00000555557 SLC38A11Q08AI6 406 aa8.03□□□□□ -1.12
SRP54-208ENST00000555557 UNQ5815/PRO19632Q6UWF5 114 aa8.03□□□□□ -1.12
SRP54-208ENST00000555557 LILRB2Q8N423 598 aa8.03□□□□□ -1.12
SRP54-208ENST00000555557 EIF4E3Q8N5X7 224 aaKnown RBP8.03□□□□□ -1.12
SRP54-208ENST00000555557 PINX1Q96BK5 328 aaKnown RBP8.03□□□□□ -1.12
SRP54-208ENST00000555557 NOL4LQ96MY1 436 aaPredicted RBP8.03□□□□□ -1.12
SRP54-208ENST00000555557 DNAJC9-AS1A6NH13 148 aa8.03□□□□□ -1.12
SRP54-208ENST00000555557 DEFA4P12838 97 aa8.03□□□□□ -1.12
SRP54-208ENST00000555557 HBG1P69891 147 aa8.03□□□□□ -1.12
SRP54-208ENST00000555557 HBG2P69892 147 aa8.03□□□□□ -1.12
SRP54-208ENST00000555557 TMEM95Q3KNT9 176 aa8.03□□□□□ -1.12
SRP54-208ENST00000555557 SLC25A24Q6NUK1 477 aa8.03□□□□□ -1.12
SRP54-208ENST00000555557 SLC35E3Q7Z769 313 aa8.03□□□□□ -1.12
SRP54-208ENST00000555557 MISP3Q96FF7 219 aa8.03□□□□□ -1.12
SRP54-208ENST00000555557 F11RQ9Y624 299 aaKnown RBP8.03□□□□□ -1.12
SRP54-208ENST00000555557 F8W036 122 aa8.02□□□□□ -1.13
SRP54-208ENST00000555557 DNASE2O00115 360 aaPredicted RBP8.02□□□□□ -1.13
SRP54-208ENST00000555557 TAAR5O14804 337 aa8.02□□□□□ -1.13
SRP54-208ENST00000555557 FBXO24O75426 580 aa8.02□□□□□ -1.13
SRP54-208ENST00000555557 IGHG2P01859 326 aa8.02□□□□□ -1.13
SRP54-208ENST00000555557 SUB1P53999 127 aaKnown RBP eCLIP8.02□□□□□ -1.13
SRP54-208ENST00000555557 DEFA5Q01523 94 aa8.02□□□□□ -1.13
SRP54-208ENST00000555557 MRPL41Q8IXM3 137 aaKnown RBP8.02□□□□□ -1.13
SRP54-208ENST00000555557 TTC9CQ8N5M4 171 aa8.02□□□□□ -1.13
SRP54-208ENST00000555557 SCARB1Q8WTV0 552 aa8.02□□□□□ -1.13
SRP54-208ENST00000555557 C12orf57Q99622 126 aa8.02□□□□□ -1.13
SRP54-208ENST00000555557 ATP5SQ99766 215 aa8.02□□□□□ -1.13
SRP54-208ENST00000555557 SRSF8Q9BRL6 282 aaKnown RBP8.02□□□□□ -1.13
SRP54-208ENST00000555557 FNDC4Q9H6D8 234 aaPredicted RBP8.02□□□□□ -1.13
SRP54-208ENST00000555557 RFNGQ9Y644 331 aa8.02□□□□□ -1.13
SRP54-208ENST00000555557 FN1P02751 2386 aaKnown RBP8.01□□□□□ -1.13
SRP54-208ENST00000555557 SMCO3A2RU48 225 aa8.01□□□□□ -1.13
SRP54-208ENST00000555557 NUPL2O15504 423 aaKnown RBP8.01□□□□□ -1.13
SRP54-208ENST00000555557 CRYGCP07315 174 aa8.01□□□□□ -1.13
SRP54-208ENST00000555557 OPRK1P41145 380 aa8.01□□□□□ -1.13
SRP54-208ENST00000555557 ARSJQ5FYB0 599 aaPredicted RBP8.01□□□□□ -1.13
SRP54-208ENST00000555557 STPG2Q8N412 459 aa8.01□□□□□ -1.13
SRP54-208ENST00000555557 ZNF114Q8NC26 417 aa8.01□□□□□ -1.13
SRP54-208ENST00000555557 OR1P1Q8NH06 330 aa8.01□□□□□ -1.13
SRP54-208ENST00000555557 OR2T6Q8NHC8 308 aa8.01□□□□□ -1.13
SRP54-208ENST00000555557 ST8SIA2Q92186 375 aa8.01□□□□□ -1.13
SRP54-208ENST00000555557 SETD2Q9BYW2 2564 aaPredicted RBP8.01□□□□□ -1.13
SRP54-208ENST00000555557 TRAV41A0A0B4J266 112 aa8.01□□□□□ -1.13
SRP54-208ENST00000555557 UBE2L5PA0A1B0GUS4 154 aa8.01□□□□□ -1.13
SRP54-208ENST00000555557 FAM181BA6NEQ2 426 aa8.01□□□□□ -1.13
SRP54-208ENST00000555557 NPIPB5A8MRT5 1133 aa8.01□□□□□ -1.13
SRP54-208ENST00000555557 SOX15O60248 233 aa8.01□□□□□ -1.13
SRP54-208ENST00000555557 NMBP08949 121 aa8.01□□□□□ -1.13
SRP54-208ENST00000555557 AKIRIN2Q53H80 203 aa8.01□□□□□ -1.13
SRP54-208ENST00000555557 TMEM86BQ8N661 226 aa8.01□□□□□ -1.13
SRP54-208ENST00000555557 HSD17B11Q8NBQ5 300 aa8.01□□□□□ -1.13
SRP54-208ENST00000555557 FANCD2OSQ96PS1 177 aa8.01□□□□□ -1.13
SRP54-208ENST00000555557 ZNF355PQ9NSJ1 428 aa8.01□□□□□ -1.13
SRP54-208ENST00000555557 UQCC1Q9NVA1 299 aa8.01□□□□□ -1.13
SRP54-208ENST00000555557 DFFBO76075 338 aa8□□□□□ -1.13
SRP54-208ENST00000555557 JTBO76095 146 aa8□□□□□ -1.13
SRP54-208ENST00000555557 IGF1P05019 195 aa8□□□□□ -1.13
SRP54-208ENST00000555557 RPL35P42766 123 aaKnown RBP8□□□□□ -1.13
SRP54-208ENST00000555557 AKR1D1P51857 326 aa8□□□□□ -1.13
SRP54-208ENST00000555557 ATP5IP56385 69 aaPredicted RBP8□□□□□ -1.13
SRP54-208ENST00000555557 RUNX1Q01196 453 aa8□□□□□ -1.13
SRP54-208ENST00000555557 CD69Q07108 199 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms