RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 RRAS2P62070 204 aaPredicted RBP9.81□□□□□ -0.84
SYNE2-219ENST00000555323 Q6ZNX1 250 aa9.81□□□□□ -0.84
SYNE2-219ENST00000555323 OR11H7Q8NGC8 314 aa9.81□□□□□ -0.84
SYNE2-219ENST00000555323 RNASEH2CQ8TDP1 164 aaKnown RBP9.81□□□□□ -0.84
SYNE2-219ENST00000555323 C11orf1Q9H5F2 150 aa9.81□□□□□ -0.84
SYNE2-219ENST00000555323 MGAT4CQ9UBM8 478 aa9.81□□□□□ -0.84
SYNE2-219ENST00000555323 RCL1Q9Y2P8 373 aaKnown RBP9.81□□□□□ -0.84
SYNE2-219ENST00000555323 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.8□□□□□ -0.84
SYNE2-219ENST00000555323 TRBV7-1A0A0A6YYK4 115 aa9.8□□□□□ -0.84
SYNE2-219ENST00000555323 K7EPK0 472 aa9.8□□□□□ -0.84
SYNE2-219ENST00000555323 WRBO00258 174 aa9.8□□□□□ -0.84
SYNE2-219ENST00000555323 TMEM50AO95807 157 aa9.8□□□□□ -0.84
SYNE2-219ENST00000555323 IFNA10P01566 189 aa9.8□□□□□ -0.84
SYNE2-219ENST00000555323 NPY1RP25929 384 aa9.8□□□□□ -0.84
SYNE2-219ENST00000555323 FCGR2BP31994 310 aaPredicted RBP9.8□□□□□ -0.84
SYNE2-219ENST00000555323 RPP30P78346 268 aaKnown RBP9.8□□□□□ -0.84
SYNE2-219ENST00000555323 RAB32Q13637 225 aa9.8□□□□□ -0.84
SYNE2-219ENST00000555323 EXOSC2Q13868 293 aaKnown RBP9.8□□□□□ -0.84
SYNE2-219ENST00000555323 FCN2Q15485 313 aa9.8□□□□□ -0.84
SYNE2-219ENST00000555323 KHDC1LQ5JSQ8 128 aa9.8□□□□□ -0.84
SYNE2-219ENST00000555323 C11orf87Q6NUJ2 197 aa9.8□□□□□ -0.84
SYNE2-219ENST00000555323 KLHL30-AS1Q8NEE0 82 aa9.8□□□□□ -0.84
SYNE2-219ENST00000555323 SCARB1Q8WTV0 552 aa9.8□□□□□ -0.84
SYNE2-219ENST00000555323 TENM1Q9UKZ4 2725 aa9.8□□□□□ -0.84
SYNE2-219ENST00000555323 C15orf62A8K5M9 175 aa9.79□□□□□ -0.84
SYNE2-219ENST00000555323 M0QZ24 198 aa9.79□□□□□ -0.84
SYNE2-219ENST00000555323 TSC22D2O75157 780 aa9.79□□□□□ -0.84
SYNE2-219ENST00000555323 SCGB1D2O95969 90 aa9.79□□□□□ -0.84
SYNE2-219ENST00000555323 MT-CO2P00403 227 aa9.79□□□□□ -0.84
SYNE2-219ENST00000555323 IGHV3-11P01762 117 aa9.79□□□□□ -0.84
SYNE2-219ENST00000555323 HSPB1P04792 205 aaKnown RBP9.79□□□□□ -0.84
SYNE2-219ENST00000555323 IAPPP10997 89 aa9.79□□□□□ -0.84
SYNE2-219ENST00000555323 MYCNOSP40205 109 aa9.79□□□□□ -0.84
SYNE2-219ENST00000555323 DEFA5Q01523 94 aa9.79□□□□□ -0.84
SYNE2-219ENST00000555323 FHL3Q13643 280 aa9.79□□□□□ -0.84
SYNE2-219ENST00000555323 NSUN5P1Q3KNT7 163 aa9.79□□□□□ -0.84
SYNE2-219ENST00000555323 C8orf86Q6ZUL3 223 aa9.79□□□□□ -0.84
SYNE2-219ENST00000555323 OR4F17Q8NGA8 305 aa9.79□□□□□ -0.84
SYNE2-219ENST00000555323 ZNF502Q8TBZ5 544 aa9.79□□□□□ -0.84
SYNE2-219ENST00000555323 ASB13Q8WXK3 278 aa9.79□□□□□ -0.84
SYNE2-219ENST00000555323 EEF1AKMT3Q96AZ1 226 aa9.79□□□□□ -0.84
SYNE2-219ENST00000555323 WDR89Q96FK6 387 aaPredicted RBP9.79□□□□□ -0.84
SYNE2-219ENST00000555323 OR4F4Q96R69 305 aa9.79□□□□□ -0.84
SYNE2-219ENST00000555323 TXN2Q99757 166 aa9.79□□□□□ -0.84
SYNE2-219ENST00000555323 FNDC4Q9H6D8 234 aaPredicted RBP9.79□□□□□ -0.84
SYNE2-219ENST00000555323 RANGRFQ9HD47 186 aaPredicted RBP9.79□□□□□ -0.84
SYNE2-219ENST00000555323 PSENENQ9NZ42 101 aa9.79□□□□□ -0.84
SYNE2-219ENST00000555323 PEF1Q9UBV8 284 aaKnown RBP9.79□□□□□ -0.84
SYNE2-219ENST00000555323 STAB1Q9NY15 2570 aa9.78□□□□□ -0.84
SYNE2-219ENST00000555323 A0A1W2PRX2 142 aa9.78□□□□□ -0.84
SYNE2-219ENST00000555323 MFSD2BA6NFX1 497 aa9.78□□□□□ -0.84
SYNE2-219ENST00000555323 PMS2P5A8MQ11 134 aa9.78□□□□□ -0.84
SYNE2-219ENST00000555323 NUDT19A8MXV4 375 aa9.78□□□□□ -0.84
SYNE2-219ENST00000555323 F8W735 103 aaPredicted RBP9.78□□□□□ -0.84
SYNE2-219ENST00000555323 CCL24O00175 119 aa9.78□□□□□ -0.84
SYNE2-219ENST00000555323 SSSCA1O60232 199 aa9.78□□□□□ -0.84
SYNE2-219ENST00000555323 DEDDO75618 318 aa9.78□□□□□ -0.84
SYNE2-219ENST00000555323 RAB11AP62491 216 aa9.78□□□□□ -0.84
SYNE2-219ENST00000555323 SPANXN5Q5MJ07 72 aa9.78□□□□□ -0.84
SYNE2-219ENST00000555323 TMEM14EPQ6UXP3 125 aa9.78□□□□□ -0.84
SYNE2-219ENST00000555323 OR11H1Q8NG94 326 aa9.78□□□□□ -0.84
SYNE2-219ENST00000555323 OR1N2Q8NGR9 330 aa9.78□□□□□ -0.84
SYNE2-219ENST00000555323 PPP1R1CQ8WVI7 109 aa9.78□□□□□ -0.84
SYNE2-219ENST00000555323 CACNG8Q8WXS5 425 aa9.78□□□□□ -0.84
SYNE2-219ENST00000555323 MISP3Q96FF7 219 aa9.78□□□□□ -0.84
SYNE2-219ENST00000555323 RAX2Q96IS3 184 aa9.78□□□□□ -0.84
SYNE2-219ENST00000555323 CCDC140Q96MF4 163 aa9.78□□□□□ -0.84
SYNE2-219ENST00000555323 C21orf62Q9NYP8 219 aa9.78□□□□□ -0.84
SYNE2-219ENST00000555323 STRAPQ9Y3F4 350 aaKnown RBP9.78□□□□□ -0.84
SYNE2-219ENST00000555323 PRSS46E5RG02 174 aa9.77□□□□□ -0.85
SYNE2-219ENST00000555323 MPC2O95563 127 aa9.77□□□□□ -0.85
SYNE2-219ENST00000555323 CLEC3BP05452 202 aa9.77□□□□□ -0.85
SYNE2-219ENST00000555323 PVALBP20472 110 aaPredicted RBP9.77□□□□□ -0.85
SYNE2-219ENST00000555323 GPX4P36969 197 aaPredicted RBP9.77□□□□□ -0.85
SYNE2-219ENST00000555323 CD69Q07108 199 aa9.77□□□□□ -0.85
SYNE2-219ENST00000555323 MLANAQ16655 118 aa9.77□□□□□ -0.85
SYNE2-219ENST00000555323 ETFRF1Q6IPR1 90 aa9.77□□□□□ -0.85
SYNE2-219ENST00000555323 ETV3LQ6ZN32 361 aa9.77□□□□□ -0.85
SYNE2-219ENST00000555323 OR5B12Q96R08 314 aa9.77□□□□□ -0.85
SYNE2-219ENST00000555323 OR4C12Q96R67 309 aa9.77□□□□□ -0.85
SYNE2-219ENST00000555323 RNF126Q9BV68 326 aa9.77□□□□□ -0.85
SYNE2-219ENST00000555323 ZNF436Q9C0F3 470 aaPredicted RBP9.77□□□□□ -0.85
SYNE2-219ENST00000555323 GAR1Q9NY12 217 aaKnown RBP9.77□□□□□ -0.85
SYNE2-219ENST00000555323 LSM5Q9Y4Y9 91 aaKnown RBP9.77□□□□□ -0.85
SYNE2-219ENST00000555323 IGHV4OR15-8A0A075B7B6 117 aa9.76□□□□□ -0.85
SYNE2-219ENST00000555323 A0A087WW49 117 aa9.76□□□□□ -0.85
SYNE2-219ENST00000555323 RPS10-NUDT3A0A1W2PQS6 291 aa9.76□□□□□ -0.85
SYNE2-219ENST00000555323 LINC01619G3V211 115 aa9.76□□□□□ -0.85
SYNE2-219ENST00000555323 H0YIZ8 118 aa9.76□□□□□ -0.85
SYNE2-219ENST00000555323 L7N2F9 121 aa9.76□□□□□ -0.85
SYNE2-219ENST00000555323 TRBV12-3P01733 135 aa9.76□□□□□ -0.85
SYNE2-219ENST00000555323 RLN2P04090 185 aa9.76□□□□□ -0.85
SYNE2-219ENST00000555323 IFNA4P05014 189 aa9.76□□□□□ -0.85
SYNE2-219ENST00000555323 GIPP09681 153 aaPredicted RBP9.76□□□□□ -0.85
SYNE2-219ENST00000555323 SLC25A4P12235 298 aa9.76□□□□□ -0.85
SYNE2-219ENST00000555323 OPRK1P41145 380 aa9.76□□□□□ -0.85
SYNE2-219ENST00000555323 MFAP4P55083 255 aa9.76□□□□□ -0.85
SYNE2-219ENST00000555323 VAMP2P63027 116 aa9.76□□□□□ -0.85
SYNE2-219ENST00000555323 ZNF616Q08AN1 781 aa9.76□□□□□ -0.85
SYNE2-219ENST00000555323 DEFB136Q30KP8 78 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms