RNA–Protein interactions for RNA: ENST00000555303.1

AC004828.1-201, humanhuman

TSL 3 BASIC

Gene AC004828.1, Length 654 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004828.1-201ENST00000555303 NPBWR1P48145 328 aa6.68□□□□□ -1.34
AC004828.1-201ENST00000555303 AKR1C2P52895 323 aa6.68□□□□□ -1.34
AC004828.1-201ENST00000555303 DEFB135Q30KP9 77 aa6.68□□□□□ -1.34
AC004828.1-201ENST00000555303 SLC35G3Q8N808 338 aa6.68□□□□□ -1.34
AC004828.1-201ENST00000555303 CCDC71LQ8N9Z2 235 aa6.68□□□□□ -1.34
AC004828.1-201ENST00000555303 ZFAND1Q8TCF1 268 aa6.68□□□□□ -1.34
AC004828.1-201ENST00000555303 GATAD1Q8WUU5 269 aa6.68□□□□□ -1.34
AC004828.1-201ENST00000555303 RNF183Q96D59 192 aa6.68□□□□□ -1.34
AC004828.1-201ENST00000555303 PDCD10Q9BUL8 212 aa6.68□□□□□ -1.34
AC004828.1-201ENST00000555303 RHPN1-AS1Q9BWJ2 59 aa6.68□□□□□ -1.34
AC004828.1-201ENST00000555303 UBQLN2Q9UHD9 624 aa6.68□□□□□ -1.34
AC004828.1-201ENST00000555303 EPPK1P58107 5090 aaKnown RBP6.67□□□□□ -1.34
AC004828.1-201ENST00000555303 TRAV14DV4A0A0A6YYC5 116 aa6.67□□□□□ -1.34
AC004828.1-201ENST00000555303 TRAV2A0A0B4J234 112 aa6.67□□□□□ -1.34
AC004828.1-201ENST00000555303 M0QYG6 137 aa6.67□□□□□ -1.34
AC004828.1-201ENST00000555303 CHEK1O14757 476 aa6.67□□□□□ -1.34
AC004828.1-201ENST00000555303 YIF1AO95070 293 aa6.67□□□□□ -1.34
AC004828.1-201ENST00000555303 P0C879 139 aa6.67□□□□□ -1.34
AC004828.1-201ENST00000555303 ZNF182P17025 639 aaPredicted RBP6.67□□□□□ -1.34
AC004828.1-201ENST00000555303 SUB1P53999 127 aaKnown RBP eCLIP6.67□□□□□ -1.34
AC004828.1-201ENST00000555303 PIGPP57054 158 aa6.67□□□□□ -1.34
AC004828.1-201ENST00000555303 PAFAH1B2P68402 229 aa6.67□□□□□ -1.34
AC004828.1-201ENST00000555303 MRPS10P82664 201 aaKnown RBP6.67□□□□□ -1.34
AC004828.1-201ENST00000555303 SSBP1Q04837 148 aaKnown RBP6.67□□□□□ -1.34
AC004828.1-201ENST00000555303 LYG2Q86SG7 212 aa6.67□□□□□ -1.34
AC004828.1-201ENST00000555303 FAM219AQ8IW50 185 aa6.67□□□□□ -1.34
AC004828.1-201ENST00000555303 DUSP18Q8NEJ0 188 aa6.67□□□□□ -1.34
AC004828.1-201ENST00000555303 RNF2Q99496 336 aa6.67□□□□□ -1.34
AC004828.1-201ENST00000555303 TMEM231Q9H6L2 316 aa6.67□□□□□ -1.34
AC004828.1-201ENST00000555303 MAP6D1Q9H9H5 199 aa6.67□□□□□ -1.34
AC004828.1-201ENST00000555303 COPZ2Q9P299 210 aa6.67□□□□□ -1.34
AC004828.1-201ENST00000555303 MTFP1Q9UDX5 166 aa6.67□□□□□ -1.34
AC004828.1-201ENST00000555303 IGHV3OR16-8A0A075B7F1 116 aa6.66□□□□□ -1.34
AC004828.1-201ENST00000555303 A0A0J9YWU9 116 aa6.66□□□□□ -1.34
AC004828.1-201ENST00000555303 C3orf85A0A1B0GTC6 90 aa6.66□□□□□ -1.34
AC004828.1-201ENST00000555303 CXorf65A6NEN9 183 aa6.66□□□□□ -1.34
AC004828.1-201ENST00000555303 GABARAPH6UMI1 98 aa6.66□□□□□ -1.34
AC004828.1-201ENST00000555303 ZNF207O43670 478 aaKnown RBP6.66□□□□□ -1.34
AC004828.1-201ENST00000555303 DFFBO76075 338 aa6.66□□□□□ -1.34
AC004828.1-201ENST00000555303 IGKV1-5P01602 117 aa6.66□□□□□ -1.34
AC004828.1-201ENST00000555303 CD74P04233 296 aa6.66□□□□□ -1.34
AC004828.1-201ENST00000555303 CD3DP04234 171 aa6.66□□□□□ -1.34
AC004828.1-201ENST00000555303 UCP1P25874 307 aa6.66□□□□□ -1.34
AC004828.1-201ENST00000555303 TAS2R19P59542 299 aa6.66□□□□□ -1.34
AC004828.1-201ENST00000555303 CTF1Q16619 201 aa6.66□□□□□ -1.34
AC004828.1-201ENST00000555303 FAM90A2PQ658T7 463 aa6.66□□□□□ -1.34
AC004828.1-201ENST00000555303 PVRIGQ6DKI7 326 aa6.66□□□□□ -1.34
AC004828.1-201ENST00000555303 ZNF600Q6ZNG1 722 aa6.66□□□□□ -1.34
AC004828.1-201ENST00000555303 TMEM229BQ8NBD8 167 aa6.66□□□□□ -1.34
AC004828.1-201ENST00000555303 OR52I2Q8NH67 350 aa6.66□□□□□ -1.34
AC004828.1-201ENST00000555303 TERB2Q8NHR7 220 aa6.66□□□□□ -1.34
AC004828.1-201ENST00000555303 LINC00476Q8WZB0 136 aa6.66□□□□□ -1.34
AC004828.1-201ENST00000555303 PINX1Q96BK5 328 aaKnown RBP6.66□□□□□ -1.34
AC004828.1-201ENST00000555303 RRNAD1Q96FB5 475 aaKnown RBP6.66□□□□□ -1.34
AC004828.1-201ENST00000555303 ZNF414Q96IQ9 312 aa6.66□□□□□ -1.34
AC004828.1-201ENST00000555303 TP53RKQ96S44 253 aa6.66□□□□□ -1.34
AC004828.1-201ENST00000555303 VSIRQ9H7M9 311 aa6.66□□□□□ -1.34
AC004828.1-201ENST00000555303 ENY2Q9NPA8 101 aa6.66□□□□□ -1.34
AC004828.1-201ENST00000555303 RABL2AQ9UBK7 228 aaPredicted RBP6.66□□□□□ -1.34
AC004828.1-201ENST00000555303 EXTL2Q9UBQ6 330 aa6.66□□□□□ -1.34
AC004828.1-201ENST00000555303 KLK11Q9UBX7 282 aa6.66□□□□□ -1.34
AC004828.1-201ENST00000555303 RABL2BQ9UNT1 228 aa6.66□□□□□ -1.34
AC004828.1-201ENST00000555303 KLK5Q9Y337 293 aaPredicted RBP6.66□□□□□ -1.34
AC004828.1-201ENST00000555303 HYDINQ4G0P3 5121 aa6.66□□□□□ -1.34
AC004828.1-201ENST00000555303 BIRC6Q9NR09 4857 aa6.66□□□□□ -1.34
AC004828.1-201ENST00000555303 A0A0B4J293 547 aa6.65□□□□□ -1.34
AC004828.1-201ENST00000555303 A0A1W2PS18 150 aa6.65□□□□□ -1.34
AC004828.1-201ENST00000555303 ST8SIA3O43173 380 aa6.65□□□□□ -1.34
AC004828.1-201ENST00000555303 RAB3DO95716 219 aa6.65□□□□□ -1.34
AC004828.1-201ENST00000555303 IFNA17P01571 189 aa6.65□□□□□ -1.34
AC004828.1-201ENST00000555303 RPL5P46777 297 aaKnown RBP6.65□□□□□ -1.34
AC004828.1-201ENST00000555303 HOXA1P49639 335 aaPredicted RBP6.65□□□□□ -1.34
AC004828.1-201ENST00000555303 PPP5CP53041 499 aa6.65□□□□□ -1.34
AC004828.1-201ENST00000555303 MEF2DQ14814 521 aa6.65□□□□□ -1.34
AC004828.1-201ENST00000555303 SURF2Q15527 256 aaPredicted RBP6.65□□□□□ -1.34
AC004828.1-201ENST00000555303 TRIM16LQ309B1 348 aa6.65□□□□□ -1.34
AC004828.1-201ENST00000555303 AARDQ4LEZ3 155 aa6.65□□□□□ -1.34
AC004828.1-201ENST00000555303 GPR107Q5VW38 600 aa6.65□□□□□ -1.34
AC004828.1-201ENST00000555303 TOMM20LQ6UXN7 152 aa6.65□□□□□ -1.34
AC004828.1-201ENST00000555303 CSTL1Q9H114 145 aa6.65□□□□□ -1.34
AC004828.1-201ENST00000555303 C11orf68Q9H3H3 251 aaKnown RBP6.65□□□□□ -1.34
AC004828.1-201ENST00000555303 ZFAND3Q9H8U3 227 aa6.65□□□□□ -1.34
AC004828.1-201ENST00000555303 CACFD1Q9UGQ2 172 aa6.65□□□□□ -1.34
AC004828.1-201ENST00000555303 RPS10-NUDT3A0A1W2PQS6 291 aa6.64□□□□□ -1.35
AC004828.1-201ENST00000555303 MPTX1A8MV57 137 aa6.64□□□□□ -1.35
AC004828.1-201ENST00000555303 TMEM50AO95807 157 aa6.64□□□□□ -1.35
AC004828.1-201ENST00000555303 RNASE2P10153 161 aaKnown RBP6.64□□□□□ -1.35
AC004828.1-201ENST00000555303 RPL35AP18077 110 aaKnown RBP6.64□□□□□ -1.35
AC004828.1-201ENST00000555303 PI3P19957 117 aa6.64□□□□□ -1.35
AC004828.1-201ENST00000555303 HTR2BP41595 481 aa6.64□□□□□ -1.35
AC004828.1-201ENST00000555303 PMS2P11Q13670 270 aa6.64□□□□□ -1.35
AC004828.1-201ENST00000555303 BSXQ3C1V8 233 aa6.64□□□□□ -1.35
AC004828.1-201ENST00000555303 SCGB2B2Q4G0G5 96 aa6.64□□□□□ -1.35
AC004828.1-201ENST00000555303 RNASE12Q5GAN4 147 aaKnown RBP6.64□□□□□ -1.35
AC004828.1-201ENST00000555303 STEAP1BQ6NZ63 245 aa6.64□□□□□ -1.35
AC004828.1-201ENST00000555303 CEMP1Q6PRD7 247 aaPredicted RBP6.64□□□□□ -1.35
AC004828.1-201ENST00000555303 TCF24Q7RTU0 167 aa6.64□□□□□ -1.35
AC004828.1-201ENST00000555303 APRG1Q8IVJ8 170 aa6.64□□□□□ -1.35
AC004828.1-201ENST00000555303 OR13C8Q8NGS7 320 aa6.64□□□□□ -1.35
AC004828.1-201ENST00000555303 OR52E5Q8NH55 327 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms