RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 GOLGA8KD6RF30 607 aa2.44□□□□□ -2.02
CKS1BP1-201ENST00000555221 GOLGA8RI6L899 631 aa2.44□□□□□ -2.02
CKS1BP1-201ENST00000555221 COPEO14579 308 aa2.44□□□□□ -2.02
CKS1BP1-201ENST00000555221 NIPSNAP2O75323 286 aa2.44□□□□□ -2.02
CKS1BP1-201ENST00000555221 CRTAPO75718 401 aaPredicted RBP2.44□□□□□ -2.02
CKS1BP1-201ENST00000555221 OCMP0CE72 109 aaPredicted RBP2.44□□□□□ -2.02
CKS1BP1-201ENST00000555221 NEFHP12036 1026 aa2.44□□□□□ -2.02
CKS1BP1-201ENST00000555221 CBR1P16152 277 aa2.44□□□□□ -2.02
CKS1BP1-201ENST00000555221 UGT2B7P16662 529 aa2.44□□□□□ -2.02
CKS1BP1-201ENST00000555221 PSMB6P28072 239 aa2.44□□□□□ -2.02
CKS1BP1-201ENST00000555221 DMTNQ08495 405 aa2.44□□□□□ -2.02
CKS1BP1-201ENST00000555221 ACSBG2Q5FVE4 666 aa2.44□□□□□ -2.02
CKS1BP1-201ENST00000555221 AGTRAPQ6RW13 159 aa2.44□□□□□ -2.02
CKS1BP1-201ENST00000555221 ZNF322Q6U7Q0 402 aaPredicted RBP2.44□□□□□ -2.02
CKS1BP1-201ENST00000555221 SCGB1D4Q6XE38 83 aa2.44□□□□□ -2.02
CKS1BP1-201ENST00000555221 YIPF7Q8N8F6 280 aa2.44□□□□□ -2.02
CKS1BP1-201ENST00000555221 OR51H1Q8NH63 302 aa2.44□□□□□ -2.02
CKS1BP1-201ENST00000555221 OR2V1Q8NHB1 315 aa2.44□□□□□ -2.02
CKS1BP1-201ENST00000555221 TNFAIP8L1Q8WVP5 186 aa2.44□□□□□ -2.02
CKS1BP1-201ENST00000555221 RBP7Q96R05 134 aa2.44□□□□□ -2.02
CKS1BP1-201ENST00000555221 TMEM208Q9BTX3 173 aa2.44□□□□□ -2.02
CKS1BP1-201ENST00000555221 MED18Q9BUE0 208 aa2.44□□□□□ -2.02
CKS1BP1-201ENST00000555221 TMEM109Q9BVC6 243 aa2.44□□□□□ -2.02
CKS1BP1-201ENST00000555221 U3KQA8 63 aa2.44□□□□□ -2.02
CKS1BP1-201ENST00000555221 JMJD1CQ15652 2540 aa2.44□□□□□ -2.02
CKS1BP1-201ENST00000555221 LRRK2Q5S007 2527 aa2.44□□□□□ -2.02
CKS1BP1-201ENST00000555221 CEP192Q8TEP8 1941 aa2.44□□□□□ -2.02
CKS1BP1-201ENST00000555221 NBPF19A0A087WUL8 3843 aa2.44□□□□□ -2.02
CKS1BP1-201ENST00000555221 WDFY3Q8IZQ1 3526 aa2.43□□□□□ -2.02
CKS1BP1-201ENST00000555221 IGSF23A1L1A6 192 aa2.43□□□□□ -2.02
CKS1BP1-201ENST00000555221 TMEM114B3SHH9 223 aa2.43□□□□□ -2.02
CKS1BP1-201ENST00000555221 FTCDNL1E5RQL4 147 aa2.43□□□□□ -2.02
CKS1BP1-201ENST00000555221 CCL22O00626 93 aa2.43□□□□□ -2.02
CKS1BP1-201ENST00000555221 BIRC5O15392 142 aa2.43□□□□□ -2.02
CKS1BP1-201ENST00000555221 ARL6IP5O75915 188 aa2.43□□□□□ -2.02
CKS1BP1-201ENST00000555221 NSA2O95478 260 aaKnown RBP2.43□□□□□ -2.02
CKS1BP1-201ENST00000555221 ATP6V1G2O95670 118 aa2.43□□□□□ -2.02
CKS1BP1-201ENST00000555221 UQCRHP07919 91 aa2.43□□□□□ -2.02
CKS1BP1-201ENST00000555221 CCL4P13236 92 aa2.43□□□□□ -2.02
CKS1BP1-201ENST00000555221 NQO1P15559 274 aaKnown RBP2.43□□□□□ -2.02
CKS1BP1-201ENST00000555221 CFL1P23528 166 aaKnown RBP2.43□□□□□ -2.02
CKS1BP1-201ENST00000555221 RAP1GDS1P52306 607 aa2.43□□□□□ -2.02
CKS1BP1-201ENST00000555221 EMP2P54851 167 aa2.43□□□□□ -2.02
CKS1BP1-201ENST00000555221 DNAJB13P59910 316 aa2.43□□□□□ -2.02
CKS1BP1-201ENST00000555221 PSG4Q00888 419 aa2.43□□□□□ -2.02
CKS1BP1-201ENST00000555221 BSPH1Q075Z2 132 aa2.43□□□□□ -2.02
CKS1BP1-201ENST00000555221 HSP90B2PQ58FF3 399 aa2.43□□□□□ -2.02
CKS1BP1-201ENST00000555221 KRTAP13-1Q8IUC0 172 aa2.43□□□□□ -2.02
CKS1BP1-201ENST00000555221 KRT222Q8N1A0 295 aa2.43□□□□□ -2.02
CKS1BP1-201ENST00000555221 PLPP5Q8NEB5 264 aa2.43□□□□□ -2.02
CKS1BP1-201ENST00000555221 OR4K13Q8NH42 304 aa2.43□□□□□ -2.02
CKS1BP1-201ENST00000555221 SUN5Q8TC36 379 aa2.43□□□□□ -2.02
CKS1BP1-201ENST00000555221 PATE1Q8WXA2 126 aa2.43□□□□□ -2.02
CKS1BP1-201ENST00000555221 PRAP1Q96NZ9 151 aa2.43□□□□□ -2.02
CKS1BP1-201ENST00000555221 SERPINI1Q99574 410 aa2.43□□□□□ -2.02
CKS1BP1-201ENST00000555221 DCUN1D5Q9BTE7 237 aa2.43□□□□□ -2.02
CKS1BP1-201ENST00000555221 NKIRAS1Q9NYS0 192 aa2.43□□□□□ -2.02
CKS1BP1-201ENST00000555221 TAS2R9Q9NYW1 312 aa2.43□□□□□ -2.02
CKS1BP1-201ENST00000555221 MMACHCQ9Y4U1 282 aa2.43□□□□□ -2.02
CKS1BP1-201ENST00000555221 PCLOQ9Y6V0 5065 aa2.43□□□□□ -2.02
CKS1BP1-201ENST00000555221 RP1P56715 2156 aa2.43□□□□□ -2.02
CKS1BP1-201ENST00000555221 CNTRLQ7Z7A1 2325 aa2.42□□□□□ -2.02
CKS1BP1-201ENST00000555221 LOC102725191A0A1B0GVB3 256 aa2.42□□□□□ -2.02
CKS1BP1-201ENST00000555221 C17orf98A8MV24 154 aa2.42□□□□□ -2.02
CKS1BP1-201ENST00000555221 H0YGG7 62 aa2.42□□□□□ -2.02
CKS1BP1-201ENST00000555221 C3orf84H3BNL1 204 aa2.42□□□□□ -2.02
CKS1BP1-201ENST00000555221 CCRL2O00421 344 aa2.42□□□□□ -2.02
CKS1BP1-201ENST00000555221 ATP8B1O43520 1251 aa2.42□□□□□ -2.02
CKS1BP1-201ENST00000555221 ORM2P19652 201 aa2.42□□□□□ -2.02
CKS1BP1-201ENST00000555221 DAD1P61803 113 aa2.42□□□□□ -2.02
CKS1BP1-201ENST00000555221 TBPL1P62380 186 aa2.42□□□□□ -2.02
CKS1BP1-201ENST00000555221 DEFA6Q01524 100 aa2.42□□□□□ -2.02
CKS1BP1-201ENST00000555221 TSNQ15631 228 aaKnown RBP2.42□□□□□ -2.02
CKS1BP1-201ENST00000555221 IMPG1Q17R60 797 aa2.42□□□□□ -2.02
CKS1BP1-201ENST00000555221 DNAL1Q4LDG9 190 aa2.42□□□□□ -2.02
CKS1BP1-201ENST00000555221 SCIMPQ6UWF3 145 aa2.42□□□□□ -2.02
CKS1BP1-201ENST00000555221 SBSNQ6UWP8 590 aa2.42□□□□□ -2.02
CKS1BP1-201ENST00000555221 LRRC34Q8IZ02 419 aa2.42□□□□□ -2.02
CKS1BP1-201ENST00000555221 TMEM75Q8N9X5 138 aa2.42□□□□□ -2.02
CKS1BP1-201ENST00000555221 C7orf50Q9BRJ6 194 aaKnown RBP2.42□□□□□ -2.02
CKS1BP1-201ENST00000555221 TUBA4BQ9H853 241 aa2.42□□□□□ -2.02
CKS1BP1-201ENST00000555221 VPS29Q9UBQ0 182 aa2.42□□□□□ -2.02
CKS1BP1-201ENST00000555221 C3orf18Q9UK00 162 aa2.42□□□□□ -2.02
CKS1BP1-201ENST00000555221 PUS1Q9Y606 427 aaKnown RBP eCLIP2.42□□□□□ -2.02
CKS1BP1-201ENST00000555221 ALG5Q9Y673 324 aa2.42□□□□□ -2.02
CKS1BP1-201ENST00000555221 HSPE1-MOB4S4R3N1 261 aa2.42□□□□□ -2.02
CKS1BP1-201ENST00000555221 ATRQ13535 2644 aa2.42□□□□□ -2.02
CKS1BP1-201ENST00000555221 PCDH15Q96QU1 1955 aa2.41□□□□□ -2.02
CKS1BP1-201ENST00000555221 NYNRINQ9P2P1 1898 aaKnown RBP2.41□□□□□ -2.02
CKS1BP1-201ENST00000555221 MUC22E2RYF6 1773 aaPredicted RBP2.41□□□□□ -2.02
CKS1BP1-201ENST00000555221 COL12A1Q99715 3063 aa2.41□□□□□ -2.02
CKS1BP1-201ENST00000555221 ANKRD36A6QL64 1941 aa2.41□□□□□ -2.02
CKS1BP1-201ENST00000555221 TRAV17A0A0B4J275 112 aa2.41□□□□□ -2.02
CKS1BP1-201ENST00000555221 GNG14A0A1W2PPG7 69 aa2.41□□□□□ -2.02
CKS1BP1-201ENST00000555221 HBZP02008 142 aa2.41□□□□□ -2.02
CKS1BP1-201ENST00000555221 IFNA16P05015 189 aa2.41□□□□□ -2.02
CKS1BP1-201ENST00000555221 SERPINA7P05543 415 aa2.41□□□□□ -2.02
CKS1BP1-201ENST00000555221 CRYGDP07320 174 aa2.41□□□□□ -2.02
CKS1BP1-201ENST00000555221 PPP1CCP36873 323 aaKnown RBP2.41□□□□□ -2.02
CKS1BP1-201ENST00000555221 OR1E2P47887 323 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms