RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 ZNF660Q6AZW8 331 aaPredicted RBP3.05□□□□□ -1.92
VRK1-203ENST00000555067 ZFAND6Q6FIF0 208 aa3.05□□□□□ -1.92
VRK1-203ENST00000555067 ZNF767PQ75MW2 155 aa3.05□□□□□ -1.92
VRK1-203ENST00000555067 TMEM86AQ8N2M4 240 aa3.05□□□□□ -1.92
VRK1-203ENST00000555067 NUP35Q8NFH5 326 aa3.05□□□□□ -1.92
VRK1-203ENST00000555067 OR9Q1Q8NGQ5 310 aa3.05□□□□□ -1.92
VRK1-203ENST00000555067 HSPB9Q9BQS6 159 aa3.05□□□□□ -1.92
VRK1-203ENST00000555067 RNF122Q9H9V4 155 aa3.05□□□□□ -1.92
VRK1-203ENST00000555067 XAGE1AQ9HD64 81 aa3.05□□□□□ -1.92
VRK1-203ENST00000555067 RASL12Q9NYN1 266 aa3.05□□□□□ -1.92
VRK1-203ENST00000555067 MYO10Q9HD67 2058 aa3.05□□□□□ -1.92
VRK1-203ENST00000555067 PLXNB1O43157 2135 aa3.04□□□□□ -1.92
VRK1-203ENST00000555067 A0A087WX48 190 aa3.04□□□□□ -1.92
VRK1-203ENST00000555067 ZNF860A6NHJ4 632 aa3.04□□□□□ -1.92
VRK1-203ENST00000555067 CCL5P13501 91 aa3.04□□□□□ -1.92
VRK1-203ENST00000555067 RPS3P23396 243 aaKnown RBP eCLIP3.04□□□□□ -1.92
VRK1-203ENST00000555067 CD200P41217 278 aa3.04□□□□□ -1.92
VRK1-203ENST00000555067 LPAR6P43657 344 aa3.04□□□□□ -1.92
VRK1-203ENST00000555067 POLR2HP52434 150 aaKnown RBP3.04□□□□□ -1.92
VRK1-203ENST00000555067 FXYD7P58549 80 aa3.04□□□□□ -1.92
VRK1-203ENST00000555067 KRTAP10-10P60014 251 aa3.04□□□□□ -1.92
VRK1-203ENST00000555067 RPL18Q07020 188 aaKnown RBP3.04□□□□□ -1.92
VRK1-203ENST00000555067 NOXRED1Q6NXP6 359 aa3.04□□□□□ -1.92
VRK1-203ENST00000555067 CLVS1Q8IUQ0 354 aaPredicted RBP3.04□□□□□ -1.92
VRK1-203ENST00000555067 Q8NAQ8 132 aa3.04□□□□□ -1.92
VRK1-203ENST00000555067 OR10P1Q8NGE3 313 aa3.04□□□□□ -1.92
VRK1-203ENST00000555067 ADAT3Q96EY9 351 aaPredicted RBP3.04□□□□□ -1.92
VRK1-203ENST00000555067 CAPZA3Q96KX2 299 aa3.04□□□□□ -1.92
VRK1-203ENST00000555067 DOHHQ9BU89 302 aa3.04□□□□□ -1.92
VRK1-203ENST00000555067 RBM7Q9Y580 266 aaKnown RBP3.04□□□□□ -1.92
VRK1-203ENST00000555067 FABP5P3A8MUU1 101 aa3.03□□□□□ -1.92
VRK1-203ENST00000555067 J3KT08 172 aa3.03□□□□□ -1.92
VRK1-203ENST00000555067 TXNDC9O14530 226 aa3.03□□□□□ -1.92
VRK1-203ENST00000555067 UBFD1O14562 309 aaKnown RBP3.03□□□□□ -1.92
VRK1-203ENST00000555067 CYB5BO43169 146 aa3.03□□□□□ -1.92
VRK1-203ENST00000555067 NPYP01303 97 aa3.03□□□□□ -1.92
VRK1-203ENST00000555067 ZNF22P17026 224 aaPredicted RBP3.03□□□□□ -1.92
VRK1-203ENST00000555067 FOXA1P55317 472 aa3.03□□□□□ -1.92
VRK1-203ENST00000555067 OR8B8Q15620 311 aa3.03□□□□□ -1.92
VRK1-203ENST00000555067 RRN3P1Q2M238 152 aa3.03□□□□□ -1.92
VRK1-203ENST00000555067 DEFB115Q30KQ5 88 aa3.03□□□□□ -1.92
VRK1-203ENST00000555067 CCDC58Q4VC31 144 aa3.03□□□□□ -1.92
VRK1-203ENST00000555067 FKBP1CQ5VVH2 108 aa3.03□□□□□ -1.92
VRK1-203ENST00000555067 SMCR5Q8TEV8 140 aa3.03□□□□□ -1.92
VRK1-203ENST00000555067 DCANP1Q8TF63 244 aa3.03□□□□□ -1.92
VRK1-203ENST00000555067 SLAMF6Q96DU3 332 aa3.03□□□□□ -1.92
VRK1-203ENST00000555067 CARD19Q96LW7 228 aa3.03□□□□□ -1.92
VRK1-203ENST00000555067 MIEN1Q9BRT3 115 aa3.03□□□□□ -1.92
VRK1-203ENST00000555067 ASF1BQ9NVP2 202 aa3.03□□□□□ -1.92
VRK1-203ENST00000555067 HEY1Q9Y5J3 304 aa3.03□□□□□ -1.92
VRK1-203ENST00000555067 LCTP09848 1927 aa3.03□□□□□ -1.92
VRK1-203ENST00000555067 LTBP4Q8N2S1 1624 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 DENND4CQ5VZ89 1909 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 COLCA2A8K830 154 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 GGTLC3B5MD39 225 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 RPL36A-HNRNPH2H7BZ11 118 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 TAX1BP3O14907 124 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 DEGS1O15121 323 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 IGHV3-7P01780 117 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 C1QAP02745 245 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 GPX2P18283 190 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 OGNP20774 298 aaKnown RBP3.02□□□□□ -1.93
VRK1-203ENST00000555067 S100A4P26447 101 aaKnown RBP3.02□□□□□ -1.93
VRK1-203ENST00000555067 PSMB8P28062 276 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 AKR1C3P42330 323 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 XCL1P47992 114 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 SRP9P49458 86 aaKnown RBP3.02□□□□□ -1.93
VRK1-203ENST00000555067 INSL3P51460 131 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 AP1S1P61966 158 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 HIST1H4AP62805 103 aaKnown RBP3.02□□□□□ -1.93
VRK1-203ENST00000555067 ZNF117Q03924 483 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 AKR1C1Q04828 323 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 KISS1Q15726 138 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 SMIM21Q3B7S5 101 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 LINC01554Q52M75 96 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 SPANXN3Q5MJ09 141 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 HRCT1Q6UXD1 115 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 ZNF705AQ6ZN79 300 aaPredicted RBP3.02□□□□□ -1.93
VRK1-203ENST00000555067 TMEM136Q6ZRR5 245 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 ANGPTL5Q86XS5 388 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 LYPD6Q86Y78 171 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 BPIFA4PQ86YQ2 179 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 OR4D11Q8NGI4 311 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 TERB2Q8NHR7 220 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 STAG3L4Q8TBR4 150 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 DNAJC9Q8WXX5 260 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 GPX7Q96SL4 187 aaPredicted RBP3.02□□□□□ -1.93
VRK1-203ENST00000555067 TUBA4BQ9H853 241 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 SLC39A9Q9NUM3 307 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 KLK12Q9UKR0 248 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 ECM29Q5VYK3 1845 aa3.02□□□□□ -1.93
VRK1-203ENST00000555067 MYH11P35749 1972 aa3.01□□□□□ -1.93
VRK1-203ENST00000555067 IGHV3-15A0A0B4J1V0 119 aa3.01□□□□□ -1.93
VRK1-203ENST00000555067 A0A0D9SEW6 157 aa3.01□□□□□ -1.93
VRK1-203ENST00000555067 A0A1B0GU33 70 aa3.01□□□□□ -1.93
VRK1-203ENST00000555067 H7BYZ3 331 aa3.01□□□□□ -1.93
VRK1-203ENST00000555067 FAM107AO95990 144 aa3.01□□□□□ -1.93
VRK1-203ENST00000555067 CKS1BP61024 79 aa3.01□□□□□ -1.93
VRK1-203ENST00000555067 BIKQ13323 160 aa3.01□□□□□ -1.93
VRK1-203ENST00000555067 MIAQ16674 131 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms