RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 PLEKHA2Q9HB19 425 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 ENY2Q9NPA8 101 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 ZC4H2Q9NQZ6 224 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 SLC2A9Q9NRM0 540 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 FAM30AQ9NZY2 134 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 ANAPC10Q9UM13 185 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 IGHV4OR15-8A0A075B7B6 117 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 A0A087WW49 117 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 ANKRD20A5PA0PJZ0 165 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 ZNF320A2RRD8 509 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 MARCH11A6NNE9 402 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 E7EUB6 86 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 LINC01619G3V211 115 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 OVOL1O14753 267 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 CYB5BO43169 146 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 GSTZ1O43708 216 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-231ENST00000554994 SOX15O60248 233 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 SAP30O75446 220 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 NDUFB8O95169 186 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 CD74P04233 296 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 CTSDP07339 412 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-231ENST00000554994 IL6RP08887 468 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-231ENST00000554994 OR5AC1P0C628 307 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 OR8U8P0C7N1 319 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 ZNF735P0CB33 412 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 AREGP15514 252 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 TBPP20226 339 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 ETV6P41212 452 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 NHLH2Q02577 135 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 ZNF616Q08AN1 781 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 EIF4EBP1Q13541 118 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-231ENST00000554994 MSMO1Q15800 293 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 MRGPRG-AS1Q2M3A8 158 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 ZNF585BQ52M93 769 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 CLEC19AQ6UXS0 136 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 C19orf35Q6ZS72 473 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 PUSL1Q8N0Z8 303 aaKnown RBP3.58□□□□□ -1.84
ATXN3-231ENST00000554994 TTC9CQ8N5M4 171 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 OR2C3Q8N628 320 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 UBAC2Q8NBM4 344 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 OR1L8Q8NGR8 309 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 OR4A5Q8NH83 315 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 WIPF2Q8TF74 440 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-231ENST00000554994 C4orf3Q8WVX3 66 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 MRGPRFQ96AM1 343 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 ZNF486Q96H40 463 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-231ENST00000554994 TMEM68Q96MH6 324 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 TMEM56Q96MV1 263 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 OR4C12Q96R67 309 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 TP53RKQ96S44 253 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 P2RX4Q99571 388 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 NEURL2Q9BR09 285 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 RTBDNQ9BSG5 229 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-231ENST00000554994 MCRIP2Q9BUT9 160 aaKnown RBP3.58□□□□□ -1.84
ATXN3-231ENST00000554994 ELOVL1Q9BW60 279 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 SLA2Q9H6Q3 261 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 RANGRFQ9HD47 186 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-231ENST00000554994 FKBP11Q9NYL4 201 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 BET1LQ9NYM9 111 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 PEF1Q9UBV8 284 aaKnown RBP3.58□□□□□ -1.84
ATXN3-231ENST00000554994 SELENOKQ9Y6D0 94 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 MUC4Q99102 2169 aa3.58□□□□□ -1.84
ATXN3-231ENST00000554994 IGHV3-35A0A0C4DH35 117 aa3.57□□□□□ -1.84
ATXN3-231ENST00000554994 GAGE12BA1L429 117 aa3.57□□□□□ -1.84
ATXN3-231ENST00000554994 GAGE12HA6NDE8 117 aa3.57□□□□□ -1.84
ATXN3-231ENST00000554994 CEBPZOSA8MTT3 80 aa3.57□□□□□ -1.84
ATXN3-231ENST00000554994 PPP5D1E7EU14 171 aa3.57□□□□□ -1.84
ATXN3-231ENST00000554994 I3L521 148 aa3.57□□□□□ -1.84
ATXN3-231ENST00000554994 RBFOX2O43251 390 aaKnown RBP eCLIP3.57□□□□□ -1.84
ATXN3-231ENST00000554994 OR2C1O95371 312 aa3.57□□□□□ -1.84
ATXN3-231ENST00000554994 PTTG1O95997 202 aa3.57□□□□□ -1.84
ATXN3-231ENST00000554994 IGHV3-48P01763 117 aa3.57□□□□□ -1.84
ATXN3-231ENST00000554994 HLA-AP01891 365 aaKnown RBP3.57□□□□□ -1.84
ATXN3-231ENST00000554994 LGALS1P09382 135 aaKnown RBP3.57□□□□□ -1.84
ATXN3-231ENST00000554994 ANXA3P12429 323 aa3.57□□□□□ -1.84
ATXN3-231ENST00000554994 HIST1H1BP16401 226 aaKnown RBP3.57□□□□□ -1.84
ATXN3-231ENST00000554994 S100A1P23297 94 aa3.57□□□□□ -1.84
ATXN3-231ENST00000554994 PTBP1P26599 531 aaKnown RBP eCLIP3.57□□□□□ -1.844e-18■■■■■ 40.6
ATXN3-231ENST00000554994 PSMB6P28072 239 aa3.57□□□□□ -1.84
ATXN3-231ENST00000554994 SLC6A1P30531 599 aa3.57□□□□□ -1.84
ATXN3-231ENST00000554994 SNCAP37840 140 aa3.57□□□□□ -1.84
ATXN3-231ENST00000554994 CCR6P51684 374 aa3.57□□□□□ -1.84
ATXN3-231ENST00000554994 SYNJ2BPP57105 145 aa3.57□□□□□ -1.84
ATXN3-231ENST00000554994 DEFA1P59665 94 aa3.57□□□□□ -1.84
ATXN3-231ENST00000554994 DEFA3P59666 94 aa3.57□□□□□ -1.84
ATXN3-231ENST00000554994 ERHP84090 104 aaKnown RBP3.57□□□□□ -1.84
ATXN3-231ENST00000554994 DHODHQ02127 395 aa3.57□□□□□ -1.84
ATXN3-231ENST00000554994 CFHR3Q02985 330 aa3.57□□□□□ -1.84
ATXN3-231ENST00000554994 EXOSC2Q13868 293 aaKnown RBP3.57□□□□□ -1.84
ATXN3-231ENST00000554994 KIAA0141Q14154 515 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-231ENST00000554994 BAK1Q16611 211 aa3.57□□□□□ -1.84
ATXN3-231ENST00000554994 RPEL1Q2QD12 228 aa3.57□□□□□ -1.84
ATXN3-231ENST00000554994 C15orf32Q32M92 178 aa3.57□□□□□ -1.84
ATXN3-231ENST00000554994 C4orf46Q504U0 113 aa3.57□□□□□ -1.84
ATXN3-231ENST00000554994 C9orf66Q5T8R8 295 aa3.57□□□□□ -1.84
ATXN3-231ENST00000554994 ASPHD1Q5U4P2 390 aa3.57□□□□□ -1.84
ATXN3-231ENST00000554994 TMEM268Q5VZI3 342 aa3.57□□□□□ -1.84
ATXN3-231ENST00000554994 CCDC190Q86UF4 302 aa3.57□□□□□ -1.84
ATXN3-231ENST00000554994 SELENOHQ8IZQ5 122 aaKnown RBP3.57□□□□□ -1.84
ATXN3-231ENST00000554994 SLC35G3Q8N808 338 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms