RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 TRAV5A0A0B4J249 113 aa13.53□□□□□ -0.24
XRCC3-209ENST00000554913 OR10W1Q8NGF6 305 aa13.53□□□□□ -0.24
XRCC3-209ENST00000554913 FAM168AQ92567 244 aa13.53□□□□□ -0.24
XRCC3-209ENST00000554913 KCNS1Q96KK3 526 aa13.53□□□□□ -0.24
XRCC3-209ENST00000554913 IGF2BP2-AS1Q96M15 143 aa13.53□□□□□ -0.24
XRCC3-209ENST00000554913 LINC00479Q96M42 142 aa13.53□□□□□ -0.24
XRCC3-209ENST00000554913 ARFGEF3Q5TH69 2177 aa13.52□□□□□ -0.24
XRCC3-209ENST00000554913 RIF1Q5UIP0 2472 aaKnown RBP13.52□□□□□ -0.24
XRCC3-209ENST00000554913 TEX50A0A1B0GTY4 177 aa13.52□□□□□ -0.24
XRCC3-209ENST00000554913 OR5G3P0C626 314 aa13.52□□□□□ -0.24
XRCC3-209ENST00000554913 TFPI2P48307 235 aa13.52□□□□□ -0.24
XRCC3-209ENST00000554913 PPOXP50336 477 aa13.52□□□□□ -0.24
XRCC3-209ENST00000554913 C1orf174Q8IYL3 243 aa13.52□□□□□ -0.24
XRCC3-209ENST00000554913 FAM19A2Q8N3H0 131 aa13.52□□□□□ -0.24
XRCC3-209ENST00000554913 CDC42EP3Q9UKI2 254 aa13.52□□□□□ -0.24
XRCC3-209ENST00000554913 PROCRQ9UNN8 238 aa13.52□□□□□ -0.24
XRCC3-209ENST00000554913 ZNF292O60281 2723 aa13.52□□□□□ -0.24
XRCC3-209ENST00000554913 SMIM27A0A1W2PRY6 76 aa13.52□□□□□ -0.25
XRCC3-209ENST00000554913 M0R1B8 84 aa13.52□□□□□ -0.25
XRCC3-209ENST00000554913 AMY1AP04745 511 aa13.52□□□□□ -0.25
XRCC3-209ENST00000554913 CT45A6P0DMU7 189 aa13.52□□□□□ -0.25
XRCC3-209ENST00000554913 CT45A5P0DMU8 189 aa13.52□□□□□ -0.25
XRCC3-209ENST00000554913 CT45A7P0DMV0 189 aa13.52□□□□□ -0.25
XRCC3-209ENST00000554913 CTRLP40313 264 aa13.52□□□□□ -0.25
XRCC3-209ENST00000554913 RPL19P84098 196 aaKnown RBP13.52□□□□□ -0.25
XRCC3-209ENST00000554913 OR4B1Q8NGF8 309 aa13.52□□□□□ -0.25
XRCC3-209ENST00000554913 ADTRPQ96IZ2 230 aa13.52□□□□□ -0.25
XRCC3-209ENST00000554913 LOXL4Q96JB6 756 aa13.52□□□□□ -0.25
XRCC3-209ENST00000554913 SLC35E1Q96K37 410 aa13.52□□□□□ -0.25
XRCC3-209ENST00000554913 DKK4Q9UBT3 224 aa13.52□□□□□ -0.25
XRCC3-209ENST00000554913 ZNF257Q9Y2Q1 563 aa13.52□□□□□ -0.25
XRCC3-209ENST00000554913 PLCE1Q9P212 2302 aa13.52□□□□□ -0.25
XRCC3-209ENST00000554913 SPATA45Q537H7 98 aa13.51□□□□□ -0.25
XRCC3-209ENST00000554913 SNRNP40Q96DI7 357 aaKnown RBP13.51□□□□□ -0.25
XRCC3-209ENST00000554913 SLC25A33Q9BSK2 321 aa13.51□□□□□ -0.25
XRCC3-209ENST00000554913 SSBP3Q9BWW4 388 aaPredicted RBP13.51□□□□□ -0.25
XRCC3-209ENST00000554913 SLC35D1Q9NTN3 355 aa13.51□□□□□ -0.25
XRCC3-209ENST00000554913 ZNF324O75467 553 aaPredicted RBP13.51□□□□□ -0.25
XRCC3-209ENST00000554913 C8orf88P0DMB2 117 aa13.51□□□□□ -0.25
XRCC3-209ENST00000554913 BTF3P20290 206 aaKnown RBP13.51□□□□□ -0.25
XRCC3-209ENST00000554913 TAS2R45P59539 299 aa13.51□□□□□ -0.25
XRCC3-209ENST00000554913 RND1Q92730 232 aa13.51□□□□□ -0.25
XRCC3-209ENST00000554913 SARAFQ96BY9 339 aa13.51□□□□□ -0.25
XRCC3-209ENST00000554913 PPIAL4AQ9Y536 164 aa13.51□□□□□ -0.25
XRCC3-209ENST00000554913 A0A1W2PRE2 83 aa13.5□□□□□ -0.25
XRCC3-209ENST00000554913 RNASE2P10153 161 aaKnown RBP13.5□□□□□ -0.25
XRCC3-209ENST00000554913 KLF3P57682 345 aaPredicted RBP13.5□□□□□ -0.25
XRCC3-209ENST00000554913 C2orf83Q53S99 150 aa13.5□□□□□ -0.25
XRCC3-209ENST00000554913 NIT1Q86X76 327 aa13.5□□□□□ -0.25
XRCC3-209ENST00000554913 TANC2Q9HCD6 1990 aa13.5□□□□□ -0.25
XRCC3-209ENST00000554913 HLA-DQA1P01909 254 aa13.5□□□□□ -0.25
XRCC3-209ENST00000554913 C3orf79P0CE67 100 aa13.5□□□□□ -0.25
XRCC3-209ENST00000554913 SLAQ13239 276 aa13.5□□□□□ -0.25
XRCC3-209ENST00000554913 MMDQ15546 238 aa13.5□□□□□ -0.25
XRCC3-209ENST00000554913 OR2T6Q8NHC8 308 aa13.5□□□□□ -0.25
XRCC3-209ENST00000554913 FAM167A-AS1Q96KT0 104 aa13.5□□□□□ -0.25
XRCC3-209ENST00000554913 CCL13Q99616 98 aa13.5□□□□□ -0.25
XRCC3-209ENST00000554913 SAA1P0DJI8 122 aaPredicted RBP13.49□□□□□ -0.25
XRCC3-209ENST00000554913 GAGE1Q13065 139 aa13.49□□□□□ -0.25
XRCC3-209ENST00000554913 FAM216BQ8N7L0 139 aa13.49□□□□□ -0.25
XRCC3-209ENST00000554913 TSKUQ8WUA8 353 aa13.49□□□□□ -0.25
XRCC3-209ENST00000554913 WNT10AQ9GZT5 417 aa13.49□□□□□ -0.25
XRCC3-209ENST00000554913 NCOR1P1Q9H4R4 102 aa13.49□□□□□ -0.25
XRCC3-209ENST00000554913 DCHS1Q96JQ0 3298 aa13.49□□□□□ -0.25
XRCC3-209ENST00000554913 APCSP02743 223 aa13.49□□□□□ -0.25
XRCC3-209ENST00000554913 NTF3P20783 257 aa13.49□□□□□ -0.25
XRCC3-209ENST00000554913 USF1P22415 310 aaPredicted RBP13.49□□□□□ -0.25
XRCC3-209ENST00000554913 SSBP2P81877 361 aaPredicted RBP13.49□□□□□ -0.25
XRCC3-209ENST00000554913 CD69Q07108 199 aa13.49□□□□□ -0.25
XRCC3-209ENST00000554913 COX19Q49B96 90 aa13.49□□□□□ -0.25
XRCC3-209ENST00000554913 SEM1Q6ZVN7 128 aa13.49□□□□□ -0.25
XRCC3-209ENST00000554913 SLC25A2Q9BXI2 301 aa13.49□□□□□ -0.25
XRCC3-209ENST00000554913 RAB9BQ9NP90 201 aa13.49□□□□□ -0.25
XRCC3-209ENST00000554913 IZUMO1RA6ND01 250 aa13.48□□□□□ -0.25
XRCC3-209ENST00000554913 UBE2L3P68036 154 aaKnown RBP13.48□□□□□ -0.25
XRCC3-209ENST00000554913 RTL8BQ17RB0 113 aa13.48□□□□□ -0.25
XRCC3-209ENST00000554913 PNKDQ8N490 385 aa13.48□□□□□ -0.25
XRCC3-209ENST00000554913 FAM222BQ8WU58 562 aa13.48□□□□□ -0.25
XRCC3-209ENST00000554913 GAFA1Q96PS6 74 aa13.48□□□□□ -0.25
XRCC3-209ENST00000554913 PSMB11A5LHX3 300 aa13.48□□□□□ -0.25
XRCC3-209ENST00000554913 PYYP10082 97 aa13.48□□□□□ -0.25
XRCC3-209ENST00000554913 WT1P19544 449 aaPredicted RBP13.48□□□□□ -0.25
XRCC3-209ENST00000554913 PRRX1P54821 245 aa13.48□□□□□ -0.25
XRCC3-209ENST00000554913 STUMQ69YW2 141 aa13.48□□□□□ -0.25
XRCC3-209ENST00000554913 C19orf24Q9BVV8 132 aa13.48□□□□□ -0.25
XRCC3-209ENST00000554913 RNF7Q9UBF6 113 aa13.48□□□□□ -0.25
XRCC3-209ENST00000554913 TRAV34A0A0B4J273 112 aa13.47□□□□□ -0.25
XRCC3-209ENST00000554913 GLRXP35754 106 aa13.47□□□□□ -0.25
XRCC3-209ENST00000554913 SLC25A48Q6ZT89 311 aaKnown RBP13.47□□□□□ -0.25
XRCC3-209ENST00000554913 ATOH7Q8N100 152 aa13.47□□□□□ -0.25
XRCC3-209ENST00000554913 FAM169BQ8N8A8 192 aa13.47□□□□□ -0.25
XRCC3-209ENST00000554913 OR1L8Q8NGR8 309 aa13.47□□□□□ -0.25
XRCC3-209ENST00000554913 ZNF331Q9NQX6 463 aaPredicted RBP13.47□□□□□ -0.25
XRCC3-209ENST00000554913 ZNF355PQ9NSJ1 428 aa13.47□□□□□ -0.25
XRCC3-209ENST00000554913 DCAF16Q9NXF7 216 aa13.47□□□□□ -0.25
XRCC3-209ENST00000554913 DPRXA6NFQ7 191 aa13.47□□□□□ -0.25
XRCC3-209ENST00000554913 E7EUB6 86 aa13.47□□□□□ -0.25
XRCC3-209ENST00000554913 HYPMO75409 117 aa13.47□□□□□ -0.25
XRCC3-209ENST00000554913 IGHV3-48P01763 117 aa13.47□□□□□ -0.25
XRCC3-209ENST00000554913 COL5A1-AS1Q5SY13 56 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms