RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 CCDC88CQ9P219 2028 aa1.14□□□□□ -2.23
SCFD1-213ENST00000554776 TTC21AQ8NDW8 1320 aa1.14□□□□□ -2.23
SCFD1-213ENST00000554776 GLI3P10071 1580 aa1.13□□□□□ -2.23
SCFD1-213ENST00000554776 NUP155O75694 1391 aa1.13□□□□□ -2.23
SCFD1-213ENST00000554776 hADV38S2A0JD32 116 aa1.13□□□□□ -2.23
SCFD1-213ENST00000554776 TMEM210A6NLX4 147 aa1.13□□□□□ -2.23
SCFD1-213ENST00000554776 TMEM212A6NML5 194 aa1.13□□□□□ -2.23
SCFD1-213ENST00000554776 ATP5HO75947 161 aa1.13□□□□□ -2.23
SCFD1-213ENST00000554776 PMP2P02689 132 aa1.13□□□□□ -2.23
SCFD1-213ENST00000554776 CLPSP04118 112 aa1.13□□□□□ -2.23
SCFD1-213ENST00000554776 ZNF705BP0CI00 300 aaPredicted RBP1.13□□□□□ -2.23
SCFD1-213ENST00000554776 SMIM17P0DL12 118 aa1.13□□□□□ -2.23
SCFD1-213ENST00000554776 ZNF80P51504 273 aaPredicted RBP1.13□□□□□ -2.23
SCFD1-213ENST00000554776 CDC42P60953 191 aa1.13□□□□□ -2.23
SCFD1-213ENST00000554776 MRPS15P82914 257 aaKnown RBP1.13□□□□□ -2.23
SCFD1-213ENST00000554776 ZNF345Q14585 488 aa1.13□□□□□ -2.23
SCFD1-213ENST00000554776 TMEM97Q5BJF2 176 aa1.13□□□□□ -2.23
SCFD1-213ENST00000554776 SPANXN3Q5MJ09 141 aa1.13□□□□□ -2.23
SCFD1-213ENST00000554776 LCN15Q6UWW0 184 aa1.13□□□□□ -2.23
SCFD1-213ENST00000554776 FP248Q71RG6 208 aaPredicted RBP1.13□□□□□ -2.23
SCFD1-213ENST00000554776 KRT222Q8N1A0 295 aa1.13□□□□□ -2.23
SCFD1-213ENST00000554776 OR8B3Q8NGG8 313 aa1.13□□□□□ -2.23
SCFD1-213ENST00000554776 OR51A2Q8NGJ7 313 aa1.13□□□□□ -2.23
SCFD1-213ENST00000554776 OR13C4Q8NGS5 318 aa1.13□□□□□ -2.23
SCFD1-213ENST00000554776 TERB2Q8NHR7 220 aa1.13□□□□□ -2.23
SCFD1-213ENST00000554776 ZNF563Q8TA94 476 aa1.13□□□□□ -2.23
SCFD1-213ENST00000554776 TMEM106AQ96A25 262 aa1.13□□□□□ -2.23
SCFD1-213ENST00000554776 BORCS7Q96B45 105 aa1.13□□□□□ -2.23
SCFD1-213ENST00000554776 SCGB3A1Q96QR1 104 aa1.13□□□□□ -2.23
SCFD1-213ENST00000554776 SIGMAR1Q99720 223 aa1.13□□□□□ -2.23
SCFD1-213ENST00000554776 GINS4Q9BRT9 223 aa1.13□□□□□ -2.23
SCFD1-213ENST00000554776 FBXO5Q9UKT4 447 aa1.13□□□□□ -2.23
SCFD1-213ENST00000554776 PIK3C2GO75747 1445 aa1.13□□□□□ -2.23
SCFD1-213ENST00000554776 SCN10AQ9Y5Y9 1956 aa1.12□□□□□ -2.23
SCFD1-213ENST00000554776 CR1P17927 2039 aa1.12□□□□□ -2.23
SCFD1-213ENST00000554776 IGKV1D-42A0A075B6H8 117 aa1.12□□□□□ -2.23
SCFD1-213ENST00000554776 hCG_1818297A0A087WSY0 165 aa1.12□□□□□ -2.23
SCFD1-213ENST00000554776 TRBV6-5A0A0K0K1A5 114 aa1.12□□□□□ -2.23
SCFD1-213ENST00000554776 A8MT66 165 aa1.12□□□□□ -2.23
SCFD1-213ENST00000554776 SDCBPO00560 298 aaPredicted RBP1.12□□□□□ -2.23
SCFD1-213ENST00000554776 PDE6DO43924 150 aa1.12□□□□□ -2.23
SCFD1-213ENST00000554776 HAND1O96004 215 aa1.12□□□□□ -2.23
SCFD1-213ENST00000554776 NFYAP23511 347 aaPredicted RBP1.12□□□□□ -2.23
SCFD1-213ENST00000554776 SERPINB9P50453 376 aa1.12□□□□□ -2.23
SCFD1-213ENST00000554776 FXYD2P54710 66 aa1.12□□□□□ -2.23
SCFD1-213ENST00000554776 SPA17Q15506 151 aa1.12□□□□□ -2.23
SCFD1-213ENST00000554776 NDUFA5Q16718 116 aa1.12□□□□□ -2.23
SCFD1-213ENST00000554776 C12orf74Q32Q52 190 aa1.12□□□□□ -2.23
SCFD1-213ENST00000554776 AAED1Q7RTV5 226 aa1.12□□□□□ -2.23
SCFD1-213ENST00000554776 DHFR2Q86XF0 187 aa1.12□□□□□ -2.23
SCFD1-213ENST00000554776 C10orf126Q8N4M7 172 aa1.12□□□□□ -2.23
SCFD1-213ENST00000554776 CT55Q8WUE5 264 aa1.12□□□□□ -2.23
SCFD1-213ENST00000554776 C11orf40Q8WZ69 217 aa1.12□□□□□ -2.23
SCFD1-213ENST00000554776 CHMP6Q96FZ7 201 aa1.12□□□□□ -2.23
SCFD1-213ENST00000554776 CCDC90BQ9GZT6 254 aa1.12□□□□□ -2.23
SCFD1-213ENST00000554776 TLNRD1Q9H1K6 362 aa1.12□□□□□ -2.23
SCFD1-213ENST00000554776 SLC39A9Q9NUM3 307 aa1.12□□□□□ -2.23
SCFD1-213ENST00000554776 ERGIC3Q9Y282 383 aa1.12□□□□□ -2.23
SCFD1-213ENST00000554776 FREM1Q5H8C1 2179 aa1.12□□□□□ -2.23
SCFD1-213ENST00000554776 BAZ2BQ9UIF8 2168 aaKnown RBP1.12□□□□□ -2.23
SCFD1-213ENST00000554776 COL4A1P02462 1669 aa1.12□□□□□ -2.23
SCFD1-213ENST00000554776 SETD5Q9C0A6 1442 aa1.12□□□□□ -2.23
SCFD1-213ENST00000554776 SDK1Q7Z5N4 2213 aa1.11□□□□□ -2.23
SCFD1-213ENST00000554776 C1orf196B1AJZ1 125 aa1.11□□□□□ -2.23
SCFD1-213ENST00000554776 CLDN25C9JDP6 229 aa1.11□□□□□ -2.23
SCFD1-213ENST00000554776 OR2J2O76002 312 aa1.11□□□□□ -2.23
SCFD1-213ENST00000554776 SERPINA1P01009 418 aa1.11□□□□□ -2.23
SCFD1-213ENST00000554776 RBP1P09455 135 aa1.11□□□□□ -2.23
SCFD1-213ENST00000554776 SMIM10L2AP0DMW4 78 aa1.11□□□□□ -2.23
SCFD1-213ENST00000554776 SMIM10L2BP0DMW5 78 aa1.11□□□□□ -2.23
SCFD1-213ENST00000554776 SPI1P17947 270 aa1.11□□□□□ -2.23
SCFD1-213ENST00000554776 FKBP2P26885 142 aaKnown RBP1.11□□□□□ -2.23
SCFD1-213ENST00000554776 HSD11B1P28845 292 aa1.11□□□□□ -2.23
SCFD1-213ENST00000554776 AKR1C3P42330 323 aa1.11□□□□□ -2.23
SCFD1-213ENST00000554776 TAF1AQ15573 450 aaPredicted RBP1.11□□□□□ -2.23
SCFD1-213ENST00000554776 NNATQ16517 81 aa1.11□□□□□ -2.23
SCFD1-213ENST00000554776 Q1T7F1 81 aa1.11□□□□□ -2.23
SCFD1-213ENST00000554776 KHDC3LQ587J8 217 aa1.11□□□□□ -2.23
SCFD1-213ENST00000554776 MIR17HGQ75NE6 70 aa1.11□□□□□ -2.23
SCFD1-213ENST00000554776 GDPD1Q8N9F7 314 aa1.11□□□□□ -2.23
SCFD1-213ENST00000554776 OR52L1Q8NGH7 329 aa1.11□□□□□ -2.23
SCFD1-213ENST00000554776 OR5A1Q8NGJ0 315 aa1.11□□□□□ -2.23
SCFD1-213ENST00000554776 PFN4Q8NHR9 129 aa1.11□□□□□ -2.23
SCFD1-213ENST00000554776 SLC25A40Q8TBP6 338 aa1.11□□□□□ -2.23
SCFD1-213ENST00000554776 MBD3L1Q8WWY6 194 aa1.11□□□□□ -2.23
SCFD1-213ENST00000554776 ENY2Q9NPA8 101 aa1.11□□□□□ -2.23
SCFD1-213ENST00000554776 CKLFQ9UBR5 152 aa1.11□□□□□ -2.23
SCFD1-213ENST00000554776 FAM32AQ9Y421 112 aaKnown RBP1.11□□□□□ -2.23
SCFD1-213ENST00000554776 LHFPL6Q9Y693 200 aa1.11□□□□□ -2.23
SCFD1-213ENST00000554776 PCF11O94913 1555 aaKnown RBP1.11□□□□□ -2.23
SCFD1-213ENST00000554776 ZNF106Q9H2Y7 1883 aaKnown RBP1.11□□□□□ -2.23
SCFD1-213ENST00000554776 RTTNQ86VV8 2226 aa1.11□□□□□ -2.23
SCFD1-213ENST00000554776 PCDH15Q96QU1 1955 aa1.1□□□□□ -2.23
SCFD1-213ENST00000554776 ECM29Q5VYK3 1845 aa1.1□□□□□ -2.23
SCFD1-213ENST00000554776 TOPBP1Q92547 1522 aa1.1□□□□□ -2.23
SCFD1-213ENST00000554776 OTOGLQ3ZCN5 2332 aa1.1□□□□□ -2.23
SCFD1-213ENST00000554776 ZNF682O95780 498 aa1.1□□□□□ -2.23
SCFD1-213ENST00000554776 IFNA10P01566 189 aa1.1□□□□□ -2.23
SCFD1-213ENST00000554776 PRB1P04280 392 aa1.1□□□□□ -2.23
SCFD1-213ENST00000554776 G6PCP35575 357 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms