RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 VN1R17PQ8TDU5 208 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 ZNF431Q8TF32 576 aaPredicted RBP2.19□□□□□ -2.06
PRPF39-206ENST00000554429 CARD19Q96LW7 228 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 GPHA2Q96T91 129 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 RARRES2Q99969 163 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 SLC25A31Q9H0C2 315 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 ISG20L2Q9H9L3 353 aaKnown RBP2.19□□□□□ -2.06
PRPF39-206ENST00000554429 LYRM2Q9NU23 88 aaPredicted RBP2.19□□□□□ -2.06
PRPF39-206ENST00000554429 SERTAD4Q9NUC0 356 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 POLR1DQ9Y2S0 133 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 TRAV38-1A0A0B4J264 116 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 NCBP2LA6PVI3 153 aaKnown RBP2.19□□□□□ -2.06
PRPF39-206ENST00000554429 SHISA9B4DS77 424 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 HSPB6O14558 160 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 FFAR1O14842 300 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 BUB3O43684 328 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 KBTBD11O94819 623 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 IGKV1D-16P01601 117 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 AKAIN1P0CW23 69 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 SHC1P29353 583 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 PPP1CBP62140 327 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 RAB35Q15286 201 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 ENTPD8Q5MY95 495 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 PAPPA-AS1Q5QFB9 102 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 FRG2Q64ET8 278 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 TMEM91Q6ZNR0 172 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 C22orf34Q6ZV56 151 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 C6orf120Q7Z4R8 191 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 SVBPQ8N300 66 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 TMEM99Q8N816 258 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 OR2T35Q8NGX2 323 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 OR51E1Q8TCB6 317 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 C10orf105Q8TEF2 133 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 TMEM54Q969K7 222 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 MRPS24Q96EL2 167 aaKnown RBP2.19□□□□□ -2.06
PRPF39-206ENST00000554429 CNRIP1Q96F85 164 aaPredicted RBP2.19□□□□□ -2.06
PRPF39-206ENST00000554429 FRG2BQ96QU4 278 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 TM2D1Q9BX74 207 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 POLR2J3Q9H1A7 115 aaKnown RBP2.19□□□□□ -2.06
PRPF39-206ENST00000554429 PCNX3Q9H6A9 2034 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 AAMDCQ9H7C9 122 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 TXNL4BQ9NX01 149 aaKnown RBP2.19□□□□□ -2.06
PRPF39-206ENST00000554429 NAT8Q9UHE5 227 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 ANXA10Q9UJ72 324 aa2.19□□□□□ -2.06
PRPF39-206ENST00000554429 A0A1B0GV50 99 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 M0R1B8 84 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 LYRM1O43325 122 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 RAMP1O60894 148 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 KNG1P01042 644 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 DBIP07108 87 aaKnown RBP2.18□□□□□ -2.06
PRPF39-206ENST00000554429 IL3P08700 152 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 RBMY1CP0DJD4 496 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 IGHV4-31P0DP07 118 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 FGF6P10767 208 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 ELK1P19419 428 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 FKBP2P26885 142 aaKnown RBP2.18□□□□□ -2.06
PRPF39-206ENST00000554429 G6PCP35575 357 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 GLIPR1P48060 266 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 ATP4BP51164 291 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 UBA52P62987 128 aaKnown RBP2.18□□□□□ -2.06
PRPF39-206ENST00000554429 TMEM267Q0VDI3 215 aaPredicted RBP2.18□□□□□ -2.06
PRPF39-206ENST00000554429 JOSD1Q15040 202 aaPredicted RBP2.18□□□□□ -2.06
PRPF39-206ENST00000554429 NNATQ16517 81 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 KRTAP24-1Q3LI83 254 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 MORN2Q502X0 79 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 GLYATL3Q5SZD4 288 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 TEX36Q5VZQ5 186 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 SLC18B1Q6NT16 456 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 ZNF730Q6ZMV8 503 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 ZAR1Q86SH2 424 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 NR2C2APQ86WQ0 139 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 FTMTQ8N4E7 242 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 RFLNBQ8N5W9 214 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 OR4K17Q8NGC6 315 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 OR11H7Q8NGC8 314 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 OR52R1Q8NGF1 315 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 OR8S1Q8NH09 359 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 ZNRF4Q8WWF5 429 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 CYYR1Q96J86 154 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 HYLS1Q96M11 299 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 MED28Q9H204 178 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 GPR84Q9NQS5 396 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 CA10Q9NS85 328 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 ACER3Q9NUN7 267 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 MTORP42345 2549 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 SVEP1Q4LDE5 3571 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 FXYD6-FXYD2A0A087WZ82 144 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 hADV38S2A0JD32 116 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 COLCA2A8K830 154 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 SMKR1H3BMG3 65 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 CRXO43186 299 aaPredicted RBP2.18□□□□□ -2.06
PRPF39-206ENST00000554429 BCL2L11O43521 198 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 CXorf1O96002 111 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 APOA2P02652 100 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 TTRP02766 147 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 EIF4EP06730 217 aaKnown RBP2.18□□□□□ -2.06
PRPF39-206ENST00000554429 SOD3P08294 240 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 TACSTD2P09758 323 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 CT45A10P0DMU9 189 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 CDK2P24941 298 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms