RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 RPS10-NUDT3A0A1W2PQS6 291 aa6.03□□□□□ -1.44
TDP1-209ENST00000554180 AP4M1O00189 453 aa6.03□□□□□ -1.44
TDP1-209ENST00000554180 MPDU1O75352 247 aa6.03□□□□□ -1.44
TDP1-209ENST00000554180 FBXO24O75426 580 aa6.03□□□□□ -1.44
TDP1-209ENST00000554180 BRI3O95415 125 aa6.03□□□□□ -1.44
TDP1-209ENST00000554180 IFNA5P01569 189 aa6.03□□□□□ -1.44
TDP1-209ENST00000554180 DEFA4P12838 97 aa6.03□□□□□ -1.44
TDP1-209ENST00000554180 HIST1H1BP16401 226 aaKnown RBP6.03□□□□□ -1.44
TDP1-209ENST00000554180 GPX4P36969 197 aaPredicted RBP6.03□□□□□ -1.44
TDP1-209ENST00000554180 HILS1P60008 231 aa6.03□□□□□ -1.44
TDP1-209ENST00000554180 ARL16Q0P5N6 197 aa6.03□□□□□ -1.44
TDP1-209ENST00000554180 C19orf54Q5BKX5 351 aa6.03□□□□□ -1.44
TDP1-209ENST00000554180 ASPHD1Q5U4P2 390 aa6.03□□□□□ -1.44
TDP1-209ENST00000554180 ETFRF1Q6IPR1 90 aa6.03□□□□□ -1.44
TDP1-209ENST00000554180 EIF5AL1Q6IS14 154 aaKnown RBP6.03□□□□□ -1.44
TDP1-209ENST00000554180 BAP18Q8IXM2 172 aa6.03□□□□□ -1.44
TDP1-209ENST00000554180 LFNGQ8NES3 379 aa6.03□□□□□ -1.44
TDP1-209ENST00000554180 FAM110DQ8TAY7 271 aaPredicted RBP6.03□□□□□ -1.44
TDP1-209ENST00000554180 ST8SIA2Q92186 375 aa6.03□□□□□ -1.44
TDP1-209ENST00000554180 BSCL2Q96G97 398 aaPredicted RBP6.03□□□□□ -1.44
TDP1-209ENST00000554180 JMJD8Q96S16 334 aa6.03□□□□□ -1.44
TDP1-209ENST00000554180 FAM103A1Q9BTL3 118 aaKnown RBP6.03□□□□□ -1.44
TDP1-209ENST00000554180 SMIM3Q9BZL3 60 aa6.03□□□□□ -1.44
TDP1-209ENST00000554180 PRSS22Q9GZN4 317 aa6.03□□□□□ -1.44
TDP1-209ENST00000554180 ARV1Q9H2C2 271 aa6.03□□□□□ -1.44
TDP1-209ENST00000554180 THYN1Q9P016 225 aa6.03□□□□□ -1.44
TDP1-209ENST00000554180 FBXO7Q9Y3I1 522 aa6.03□□□□□ -1.44
TDP1-209ENST00000554180 IGLV11-55A0A075B6I3 123 aa6.02□□□□□ -1.45
TDP1-209ENST00000554180 TRAV41A0A0B4J266 112 aa6.02□□□□□ -1.45
TDP1-209ENST00000554180 DNAJC9-AS1A6NH13 148 aa6.02□□□□□ -1.45
TDP1-209ENST00000554180 H3BUA1 57 aa6.02□□□□□ -1.45
TDP1-209ENST00000554180 TRIM77I1YAP6 450 aa6.02□□□□□ -1.45
TDP1-209ENST00000554180 SOX15O60248 233 aa6.02□□□□□ -1.45
TDP1-209ENST00000554180 IFNA7P01567 189 aa6.02□□□□□ -1.45
TDP1-209ENST00000554180 REG1AP05451 166 aa6.02□□□□□ -1.45
TDP1-209ENST00000554180 FAM157CP0CG43 387 aa6.02□□□□□ -1.45
TDP1-209ENST00000554180 BLCAPP62952 87 aa6.02□□□□□ -1.45
TDP1-209ENST00000554180 CD69Q07108 199 aa6.02□□□□□ -1.45
TDP1-209ENST00000554180 ECSCRQ19T08 205 aa6.02□□□□□ -1.45
TDP1-209ENST00000554180 C9orf152Q5JTZ5 239 aa6.02□□□□□ -1.45
TDP1-209ENST00000554180 RPL7L1Q6DKI1 246 aaKnown RBP6.02□□□□□ -1.45
TDP1-209ENST00000554180 UNQ5815/PRO19632Q6UWF5 114 aa6.02□□□□□ -1.45
TDP1-209ENST00000554180 SLC16A13Q7RTY0 426 aa6.02□□□□□ -1.45
TDP1-209ENST00000554180 Q8N2B8 174 aa6.02□□□□□ -1.45
TDP1-209ENST00000554180 GNPNAT1Q96EK6 184 aaPredicted RBP6.02□□□□□ -1.45
TDP1-209ENST00000554180 SLC35E1Q96K37 410 aa6.02□□□□□ -1.45
TDP1-209ENST00000554180 WNT10AQ9GZT5 417 aa6.02□□□□□ -1.45
TDP1-209ENST00000554180 WFDC1Q9HC57 220 aa6.02□□□□□ -1.45
TDP1-209ENST00000554180 FN1P02751 2386 aaKnown RBP6.02□□□□□ -1.45
TDP1-209ENST00000554180 UBE2L5PA0A1B0GUS4 154 aa6.01□□□□□ -1.45
TDP1-209ENST00000554180 SH2D7A6NKC9 451 aaPredicted RBP6.01□□□□□ -1.45
TDP1-209ENST00000554180 INAFM1C9JVW0 142 aa6.01□□□□□ -1.45
TDP1-209ENST00000554180 RGS13O14921 159 aa6.01□□□□□ -1.45
TDP1-209ENST00000554180 CRLF1O75462 422 aa6.01□□□□□ -1.45
TDP1-209ENST00000554180 RNASE1P07998 156 aaKnown RBP6.01□□□□□ -1.45
TDP1-209ENST00000554180 SEC11BP0C7V7 166 aa6.01□□□□□ -1.45
TDP1-209ENST00000554180 APELAP0DMC3 54 aa6.01□□□□□ -1.45
TDP1-209ENST00000554180 MDKP21741 143 aaPredicted RBP6.01□□□□□ -1.45
TDP1-209ENST00000554180 OPRK1P41145 380 aa6.01□□□□□ -1.45
TDP1-209ENST00000554180 MFAP2P55001 183 aa6.01□□□□□ -1.45
TDP1-209ENST00000554180 AKR1C1Q04828 323 aa6.01□□□□□ -1.45
TDP1-209ENST00000554180 ARSJQ5FYB0 599 aaPredicted RBP6.01□□□□□ -1.45
TDP1-209ENST00000554180 SLC25A24Q6NUK1 477 aa6.01□□□□□ -1.45
TDP1-209ENST00000554180 TEX261Q6UWH6 196 aa6.01□□□□□ -1.45
TDP1-209ENST00000554180 TREML4Q6UXN2 200 aa6.01□□□□□ -1.45
TDP1-209ENST00000554180 ZNF767PQ75MW2 155 aa6.01□□□□□ -1.45
TDP1-209ENST00000554180 TMEM144Q7Z5S9 345 aa6.01□□□□□ -1.45
TDP1-209ENST00000554180 TMEM116Q8NCL8 245 aa6.01□□□□□ -1.45
TDP1-209ENST00000554180 SCGB1C1Q8TD33 95 aa6.01□□□□□ -1.45
TDP1-209ENST00000554180 MISP3Q96FF7 219 aa6.01□□□□□ -1.45
TDP1-209ENST00000554180 FANCD2OSQ96PS1 177 aa6.01□□□□□ -1.45
TDP1-209ENST00000554180 GINS3Q9BRX5 216 aa6.01□□□□□ -1.45
TDP1-209ENST00000554180 PSMG3Q9BT73 122 aaPredicted RBP6.01□□□□□ -1.45
TDP1-209ENST00000554180 WDR61Q9GZS3 305 aaKnown RBP6.01□□□□□ -1.45
TDP1-209ENST00000554180 FNDC4Q9H6D8 234 aaPredicted RBP6.01□□□□□ -1.45
TDP1-209ENST00000554180 ZNF702PQ9H963 129 aa6.01□□□□□ -1.45
TDP1-209ENST00000554180 NPVFQ9HCQ7 196 aa6.01□□□□□ -1.45
TDP1-209ENST00000554180 KCNIP2Q9NS61 270 aa6.01□□□□□ -1.45
TDP1-209ENST00000554180 WDR83OSQ9Y284 106 aa6.01□□□□□ -1.45
TDP1-209ENST00000554180 LSM4Q9Y4Z0 139 aaKnown RBP6.01□□□□□ -1.45
TDP1-209ENST00000554180 TIMM9Q9Y5J7 89 aa6.01□□□□□ -1.45
TDP1-209ENST00000554180 DMRT1Q9Y5R6 373 aa6.01□□□□□ -1.45
TDP1-209ENST00000554180 TRBV9A0A0B4J1U6 114 aa6□□□□□ -1.45
TDP1-209ENST00000554180 SMCO3A2RU48 225 aa6□□□□□ -1.45
TDP1-209ENST00000554180 TMEM89A2RUT3 159 aa6□□□□□ -1.45
TDP1-209ENST00000554180 FAM223BA6NKX1 122 aa6□□□□□ -1.45
TDP1-209ENST00000554180 LINC01548A6NM66 108 aa6□□□□□ -1.45
TDP1-209ENST00000554180 G3V318 75 aa6□□□□□ -1.45
TDP1-209ENST00000554180 I3L2K1 104 aa6□□□□□ -1.45
TDP1-209ENST00000554180 K7EIM0 57 aa6□□□□□ -1.45
TDP1-209ENST00000554180 MT-CO2P00403 227 aa6□□□□□ -1.45
TDP1-209ENST00000554180 SPP1P10451 314 aa6□□□□□ -1.45
TDP1-209ENST00000554180 PPIFP30405 207 aaKnown RBP6□□□□□ -1.45
TDP1-209ENST00000554180 FCGR2BP31994 310 aaPredicted RBP6□□□□□ -1.45
TDP1-209ENST00000554180 IFITM2Q01629 132 aa6□□□□□ -1.45
TDP1-209ENST00000554180 CFHR3Q02985 330 aa6□□□□□ -1.45
TDP1-209ENST00000554180 GAMTQ14353 236 aa6□□□□□ -1.45
TDP1-209ENST00000554180 TEPPQ6URK8 271 aa6□□□□□ -1.45
TDP1-209ENST00000554180 BTNL8Q6UX41 500 aa6□□□□□ -1.45
TDP1-209ENST00000554180 FAM223AQ8IWN6 122 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms