RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 SP6Q3SY56 376 aa8.84□□□□□ -0.99
TRAPPC6B-204ENST00000554018 SCGB2B2Q4G0G5 96 aa8.84□□□□□ -0.99
TRAPPC6B-204ENST00000554018 GPR141Q7Z602 305 aa8.84□□□□□ -0.99
TRAPPC6B-204ENST00000554018 TMEM229BQ8NBD8 167 aa8.84□□□□□ -0.99
TRAPPC6B-204ENST00000554018 OR13C8Q8NGS7 320 aa8.84□□□□□ -0.99
TRAPPC6B-204ENST00000554018 TERB2Q8NHR7 220 aa8.84□□□□□ -0.99
TRAPPC6B-204ENST00000554018 PINX1Q96BK5 328 aaKnown RBP8.84□□□□□ -0.99
TRAPPC6B-204ENST00000554018 TXN2Q99757 166 aa8.84□□□□□ -0.99
TRAPPC6B-204ENST00000554018 MRPS26Q9BYN8 205 aaKnown RBP8.84□□□□□ -0.99
TRAPPC6B-204ENST00000554018 COPZ2Q9P299 210 aa8.84□□□□□ -0.99
TRAPPC6B-204ENST00000554018 SMPXQ9UHP9 88 aa8.84□□□□□ -0.99
TRAPPC6B-204ENST00000554018 AGRNO00468 2067 aa8.84□□□□□ -0.99
TRAPPC6B-204ENST00000554018 GABARAPH6UMI1 98 aa8.83□□□□□ -1
TRAPPC6B-204ENST00000554018 RGS5O15539 181 aa8.83□□□□□ -1
TRAPPC6B-204ENST00000554018 ST8SIA3O43173 380 aa8.83□□□□□ -1
TRAPPC6B-204ENST00000554018 RAB3DO95716 219 aa8.83□□□□□ -1
TRAPPC6B-204ENST00000554018 AKR1C2P52895 323 aa8.83□□□□□ -1
TRAPPC6B-204ENST00000554018 TAS2R19P59542 299 aa8.83□□□□□ -1
TRAPPC6B-204ENST00000554018 RELQ04864 619 aaPredicted RBP8.83□□□□□ -1
TRAPPC6B-204ENST00000554018 ODF3L2Q3SX64 289 aa8.83□□□□□ -1
TRAPPC6B-204ENST00000554018 STEAP1BQ6NZ63 245 aa8.83□□□□□ -1
TRAPPC6B-204ENST00000554018 IL17DQ8TAD2 202 aa8.83□□□□□ -1
TRAPPC6B-204ENST00000554018 ZFAND1Q8TCF1 268 aa8.83□□□□□ -1
TRAPPC6B-204ENST00000554018 MARCH1Q8TCQ1 289 aa8.83□□□□□ -1
TRAPPC6B-204ENST00000554018 C15orf40Q8WUR7 153 aa8.83□□□□□ -1
TRAPPC6B-204ENST00000554018 RNF2Q99496 336 aa8.83□□□□□ -1
TRAPPC6B-204ENST00000554018 RHPN1-AS1Q9BWJ2 59 aa8.83□□□□□ -1
TRAPPC6B-204ENST00000554018 NXF2Q9GZY0 626 aaKnown RBP8.83□□□□□ -1
TRAPPC6B-204ENST00000554018 IGHV3OR16-13A0A075B7E8 117 aa8.82□□□□□ -1
TRAPPC6B-204ENST00000554018 IGHV3-74A0A0B4J1X5 117 aa8.82□□□□□ -1
TRAPPC6B-204ENST00000554018 IGHV7-4-1A0A0J9YVY3 117 aa8.82□□□□□ -1
TRAPPC6B-204ENST00000554018 OR4C46A6NHA9 309 aa8.82□□□□□ -1
TRAPPC6B-204ENST00000554018 CHEK1O14757 476 aa8.82□□□□□ -1
TRAPPC6B-204ENST00000554018 GNG7O60262 68 aa8.82□□□□□ -1
TRAPPC6B-204ENST00000554018 IFNA17P01571 189 aa8.82□□□□□ -1
TRAPPC6B-204ENST00000554018 SNCAP37840 140 aa8.82□□□□□ -1
TRAPPC6B-204ENST00000554018 ETV6P41212 452 aa8.82□□□□□ -1
TRAPPC6B-204ENST00000554018 TRIM16LQ309B1 348 aa8.82□□□□□ -1
TRAPPC6B-204ENST00000554018 FAAP20Q6NZ36 180 aa8.82□□□□□ -1
TRAPPC6B-204ENST00000554018 SLC35G3Q8N808 338 aa8.82□□□□□ -1
TRAPPC6B-204ENST00000554018 CCDC71LQ8N9Z2 235 aa8.82□□□□□ -1
TRAPPC6B-204ENST00000554018 TMEM116Q8NCL8 245 aa8.82□□□□□ -1
TRAPPC6B-204ENST00000554018 OR10C1Q96KK4 312 aa8.82□□□□□ -1
TRAPPC6B-204ENST00000554018 A0A0G2JRQ6 117 aa8.81□□□□□ -1
TRAPPC6B-204ENST00000554018 ATG12O94817 140 aa8.81□□□□□ -1
TRAPPC6B-204ENST00000554018 RPL35AP18077 110 aaKnown RBP8.81□□□□□ -1
TRAPPC6B-204ENST00000554018 UCP1P25874 307 aa8.81□□□□□ -1
TRAPPC6B-204ENST00000554018 TFPI2P48307 235 aa8.81□□□□□ -1
TRAPPC6B-204ENST00000554018 APOC4P55056 127 aa8.81□□□□□ -1
TRAPPC6B-204ENST00000554018 TOMM20LQ6UXN7 152 aa8.81□□□□□ -1
TRAPPC6B-204ENST00000554018 Q6ZRM9 215 aa8.81□□□□□ -1
TRAPPC6B-204ENST00000554018 CLVS1Q8IUQ0 354 aaPredicted RBP8.81□□□□□ -1
TRAPPC6B-204ENST00000554018 RRNAD1Q96FB5 475 aaKnown RBP8.81□□□□□ -1
TRAPPC6B-204ENST00000554018 RTBDNQ9BSG5 229 aaPredicted RBP8.81□□□□□ -1
TRAPPC6B-204ENST00000554018 IGKV3-7A0A075B6H7 116 aa8.8□□□□□ -1
TRAPPC6B-204ENST00000554018 TRAV14DV4A0A0A6YYC5 116 aa8.8□□□□□ -1
TRAPPC6B-204ENST00000554018 INS-IGF2F8WCM5 200 aa8.8□□□□□ -1
TRAPPC6B-204ENST00000554018 RNASE2P10153 161 aaKnown RBP8.8□□□□□ -1
TRAPPC6B-204ENST00000554018 NPBWR1P48145 328 aa8.8□□□□□ -1
TRAPPC6B-204ENST00000554018 HOXA1P49639 335 aaPredicted RBP8.8□□□□□ -1
TRAPPC6B-204ENST00000554018 MRPS10P82664 201 aaKnown RBP8.8□□□□□ -1
TRAPPC6B-204ENST00000554018 SSBP1Q04837 148 aaKnown RBP8.8□□□□□ -1
TRAPPC6B-204ENST00000554018 MEF2DQ14814 521 aa8.8□□□□□ -1
TRAPPC6B-204ENST00000554018 ZNF124Q15973 351 aa8.8□□□□□ -1
TRAPPC6B-204ENST00000554018 DEFB135Q30KP9 77 aa8.8□□□□□ -1
TRAPPC6B-204ENST00000554018 PVRIGQ6DKI7 326 aa8.8□□□□□ -1
TRAPPC6B-204ENST00000554018 APRG1Q8IVJ8 170 aa8.8□□□□□ -1
TRAPPC6B-204ENST00000554018 GBGT1Q8N5D6 347 aa8.8□□□□□ -1
TRAPPC6B-204ENST00000554018 DUSP18Q8NEJ0 188 aa8.8□□□□□ -1
TRAPPC6B-204ENST00000554018 RNASE11Q8TAA1 199 aaKnown RBP8.8□□□□□ -1
TRAPPC6B-204ENST00000554018 SMIM4Q8WVI0 70 aa8.8□□□□□ -1
TRAPPC6B-204ENST00000554018 PDCD10Q9BUL8 212 aa8.8□□□□□ -1
TRAPPC6B-204ENST00000554018 TMEM222Q9H0R3 208 aa8.8□□□□□ -1
TRAPPC6B-204ENST00000554018 MRPL36Q9P0J6 103 aaKnown RBP8.8□□□□□ -1
TRAPPC6B-204ENST00000554018 KMT2AQ03164 3969 aa8.79□□□□□ -1
TRAPPC6B-204ENST00000554018 A0A0J9YWU9 116 aa8.79□□□□□ -1
TRAPPC6B-204ENST00000554018 DISC1C4P0D8 188 aa8.79□□□□□ -1
TRAPPC6B-204ENST00000554018 SPRY2O43597 315 aa8.79□□□□□ -1
TRAPPC6B-204ENST00000554018 CDS2O95674 445 aa8.79□□□□□ -1
TRAPPC6B-204ENST00000554018 TMEM50AO95807 157 aa8.79□□□□□ -1
TRAPPC6B-204ENST00000554018 APOHP02749 345 aaPredicted RBP8.79□□□□□ -1
TRAPPC6B-204ENST00000554018 OR5AC1P0C628 307 aa8.79□□□□□ -1
TRAPPC6B-204ENST00000554018 SUB1P53999 127 aaKnown RBP eCLIP8.79□□□□□ -1
TRAPPC6B-204ENST00000554018 IL18Q14116 193 aa8.79□□□□□ -1
TRAPPC6B-204ENST00000554018 MLANAQ16655 118 aa8.79□□□□□ -1
TRAPPC6B-204ENST00000554018 FAM90A2PQ658T7 463 aa8.79□□□□□ -1
TRAPPC6B-204ENST00000554018 Q6ZWC4 215 aa8.79□□□□□ -1
TRAPPC6B-204ENST00000554018 LILRB2Q8N423 598 aa8.79□□□□□ -1
TRAPPC6B-204ENST00000554018 STPG3Q8N7X2 389 aa8.79□□□□□ -1
TRAPPC6B-204ENST00000554018 OR4C16Q8NGL9 310 aa8.79□□□□□ -1
TRAPPC6B-204ENST00000554018 LHFPL5Q8TAF8 219 aa8.79□□□□□ -1
TRAPPC6B-204ENST00000554018 DYNC2LI1Q8TCX1 351 aa8.79□□□□□ -1
TRAPPC6B-204ENST00000554018 GLYATL2Q8WU03 294 aa8.79□□□□□ -1
TRAPPC6B-204ENST00000554018 ST8SIA2Q92186 375 aa8.79□□□□□ -1
TRAPPC6B-204ENST00000554018 DIRAS2Q96HU8 199 aa8.79□□□□□ -1
TRAPPC6B-204ENST00000554018 NAA60Q9H7X0 242 aa8.79□□□□□ -1
TRAPPC6B-204ENST00000554018 ENY2Q9NPA8 101 aa8.79□□□□□ -1
TRAPPC6B-204ENST00000554018 C14orf166Q9Y224 244 aaKnown RBP8.79□□□□□ -1
TRAPPC6B-204ENST00000554018 TP53TG1Q9Y2A0 90 aa8.79□□□□□ -1
TRAPPC6B-204ENST00000554018 PUS1Q9Y606 427 aaKnown RBP eCLIP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms