RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 ZNF79Q15937 498 aa6.42□□□□□ -1.38
PSEN1-209ENST00000553855 FAM106AQ4KMX7 169 aa6.42□□□□□ -1.38
PSEN1-209ENST00000553855 PDLIM3Q53GG5 364 aaPredicted RBP6.42□□□□□ -1.38
PSEN1-209ENST00000553855 DEFB121Q5J5C9 76 aa6.42□□□□□ -1.38
PSEN1-209ENST00000553855 LGI3Q8N145 548 aa6.42□□□□□ -1.38
PSEN1-209ENST00000553855 S100ZQ8WXG8 99 aa6.42□□□□□ -1.38
PSEN1-209ENST00000553855 IL22RA2Q969J5 263 aa6.42□□□□□ -1.38
PSEN1-209ENST00000553855 C7orf50Q9BRJ6 194 aaKnown RBP6.42□□□□□ -1.38
PSEN1-209ENST00000553855 SRRQ9GZT4 340 aa6.42□□□□□ -1.38
PSEN1-209ENST00000553855 C5orf66Q9H5L9 145 aa6.42□□□□□ -1.38
PSEN1-209ENST00000553855 TMEM14BQ9NUH8 114 aa6.42□□□□□ -1.38
PSEN1-209ENST00000553855 GAR1Q9NY12 217 aaKnown RBP6.42□□□□□ -1.38
PSEN1-209ENST00000553855 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.41□□□□□ -1.38
PSEN1-209ENST00000553855 LINC00854A0A1B0GVQ3 168 aa6.41□□□□□ -1.38
PSEN1-209ENST00000553855 NDUFB8O95169 186 aa6.41□□□□□ -1.38
PSEN1-209ENST00000553855 CDS2O95674 445 aa6.41□□□□□ -1.38
PSEN1-209ENST00000553855 IGKV1-39P01597 117 aa6.41□□□□□ -1.38
PSEN1-209ENST00000553855 IGKV1D-39P04432 117 aa6.41□□□□□ -1.38
PSEN1-209ENST00000553855 MED14OSP0DP75 135 aa6.41□□□□□ -1.38
PSEN1-209ENST00000553855 BTF3P20290 206 aaKnown RBP6.41□□□□□ -1.38
PSEN1-209ENST00000553855 SYNJ2BPP57105 145 aa6.41□□□□□ -1.38
PSEN1-209ENST00000553855 PRCDQ00LT1 54 aa6.41□□□□□ -1.38
PSEN1-209ENST00000553855 CNPY1Q3B7I2 92 aa6.41□□□□□ -1.38
PSEN1-209ENST00000553855 TMEM128Q5BJH2 165 aa6.41□□□□□ -1.38
PSEN1-209ENST00000553855 CLEC19AQ6UXS0 136 aa6.41□□□□□ -1.38
PSEN1-209ENST00000553855 CENPSQ8N2Z9 138 aa6.41□□□□□ -1.38
PSEN1-209ENST00000553855 OR10W1Q8NGF6 305 aa6.41□□□□□ -1.38
PSEN1-209ENST00000553855 VN1R17PQ8TDU5 208 aa6.41□□□□□ -1.38
PSEN1-209ENST00000553855 GALNT14Q96FL9 552 aa6.41□□□□□ -1.38
PSEN1-209ENST00000553855 PALMDQ9NP74 551 aa6.41□□□□□ -1.38
PSEN1-209ENST00000553855 HEYLQ9NQ87 328 aaPredicted RBP6.41□□□□□ -1.38
PSEN1-209ENST00000553855 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.41□□□□□ -1.38
PSEN1-209ENST00000553855 AURKAIP1Q9NWT8 199 aaPredicted RBP6.41□□□□□ -1.38
PSEN1-209ENST00000553855 F11RQ9Y624 299 aaKnown RBP6.41□□□□□ -1.38
PSEN1-209ENST00000553855 WNK1Q9H4A3 2382 aa6.41□□□□□ -1.38
PSEN1-209ENST00000553855 NOTCH1P46531 2555 aa6.41□□□□□ -1.38
PSEN1-209ENST00000553855 TRRAPQ9Y4A5 3859 aa6.4□□□□□ -1.38
PSEN1-209ENST00000553855 IGLV11-55A0A075B6I3 123 aa6.4□□□□□ -1.38
PSEN1-209ENST00000553855 ZNF320A2RRD8 509 aa6.4□□□□□ -1.38
PSEN1-209ENST00000553855 CEBPZOSA8MTT3 80 aa6.4□□□□□ -1.38
PSEN1-209ENST00000553855 CORTO00230 105 aa6.4□□□□□ -1.38
PSEN1-209ENST00000553855 IGKV1-5P01602 117 aa6.4□□□□□ -1.38
PSEN1-209ENST00000553855 IGHV3-23P01764 117 aa6.4□□□□□ -1.38
PSEN1-209ENST00000553855 PRB2P02812 416 aaPredicted RBP6.4□□□□□ -1.38
PSEN1-209ENST00000553855 SULT1A3P0DMM9 295 aa6.4□□□□□ -1.38
PSEN1-209ENST00000553855 SULT1A4P0DMN0 295 aa6.4□□□□□ -1.38
PSEN1-209ENST00000553855 PTTG1IPP53801 180 aa6.4□□□□□ -1.38
PSEN1-209ENST00000553855 SPCS3P61009 180 aa6.4□□□□□ -1.38
PSEN1-209ENST00000553855 WT1-ASQ06250 92 aa6.4□□□□□ -1.38
PSEN1-209ENST00000553855 EGFEM1PQ0D2K5 195 aa6.4□□□□□ -1.38
PSEN1-209ENST00000553855 Q56UQ5 140 aa6.4□□□□□ -1.38
PSEN1-209ENST00000553855 ACSM6Q6P461 480 aa6.4□□□□□ -1.38
PSEN1-209ENST00000553855 PLET1Q6UQ28 207 aa6.4□□□□□ -1.38
PSEN1-209ENST00000553855 LINC00299Q6ZSB3 139 aa6.4□□□□□ -1.38
PSEN1-209ENST00000553855 NOXA1Q86UR1 476 aa6.4□□□□□ -1.38
PSEN1-209ENST00000553855 SELENOHQ8IZQ5 122 aaKnown RBP6.4□□□□□ -1.38
PSEN1-209ENST00000553855 UBAC2Q8NBM4 344 aa6.4□□□□□ -1.38
PSEN1-209ENST00000553855 OR9G4Q8NGQ1 327 aa6.4□□□□□ -1.38
PSEN1-209ENST00000553855 OR1P1Q8NH06 330 aa6.4□□□□□ -1.38
PSEN1-209ENST00000553855 DYNLRB2Q8TF09 96 aa6.4□□□□□ -1.38
PSEN1-209ENST00000553855 GLYATL2Q8WU03 294 aa6.4□□□□□ -1.38
PSEN1-209ENST00000553855 HIPK2Q9H2X6 1198 aa6.4□□□□□ -1.38
PSEN1-209ENST00000553855 C21orf62Q9NYP8 219 aa6.4□□□□□ -1.38
PSEN1-209ENST00000553855 ZNF256Q9Y2P7 627 aaPredicted RBP6.4□□□□□ -1.38
PSEN1-209ENST00000553855 A0A0B4J2A0 478 aa6.39□□□□□ -1.39
PSEN1-209ENST00000553855 LOC102723971A0A1B0GUV8 181 aa6.39□□□□□ -1.39
PSEN1-209ENST00000553855 A0A1B0GW64 132 aa6.39□□□□□ -1.39
PSEN1-209ENST00000553855 DUXBA0A1W2PPF3 345 aa6.39□□□□□ -1.39
PSEN1-209ENST00000553855 CGB1A6NKQ9 187 aa6.39□□□□□ -1.39
PSEN1-209ENST00000553855 NUPL2O15504 423 aaKnown RBP6.39□□□□□ -1.39
PSEN1-209ENST00000553855 ST8SIA3O43173 380 aa6.39□□□□□ -1.39
PSEN1-209ENST00000553855 TNFRSF6BO95407 300 aa6.39□□□□□ -1.39
PSEN1-209ENST00000553855 CLEC3BP05452 202 aa6.39□□□□□ -1.39
PSEN1-209ENST00000553855 IL7P13232 177 aa6.39□□□□□ -1.39
PSEN1-209ENST00000553855 GPR183P32249 361 aa6.39□□□□□ -1.39
PSEN1-209ENST00000553855 CCR6P51684 374 aa6.39□□□□□ -1.39
PSEN1-209ENST00000553855 MFAP4P55083 255 aa6.39□□□□□ -1.39
PSEN1-209ENST00000553855 UBE2MP61081 183 aaKnown RBP6.39□□□□□ -1.39
PSEN1-209ENST00000553855 KLF5Q13887 457 aaPredicted RBP6.39□□□□□ -1.39
PSEN1-209ENST00000553855 TMEM187Q14656 261 aa6.39□□□□□ -1.39
PSEN1-209ENST00000553855 BAK1Q16611 211 aa6.39□□□□□ -1.39
PSEN1-209ENST00000553855 C19orf35Q6ZS72 473 aa6.39□□□□□ -1.39
PSEN1-209ENST00000553855 OR52E5Q8NH55 327 aa6.39□□□□□ -1.39
PSEN1-209ENST00000553855 OR1S1Q8NH92 325 aa6.39□□□□□ -1.39
PSEN1-209ENST00000553855 COQ8AQ8NI60 647 aa6.39□□□□□ -1.39
PSEN1-209ENST00000553855 PINX1Q96BK5 328 aaKnown RBP6.39□□□□□ -1.39
PSEN1-209ENST00000553855 ATP6V0BQ99437 205 aa6.39□□□□□ -1.39
PSEN1-209ENST00000553855 CCDC32Q9BV29 185 aa6.39□□□□□ -1.39
PSEN1-209ENST00000553855 CACNG5Q9UF02 275 aa6.39□□□□□ -1.39
PSEN1-209ENST00000553855 SHPKQ9UHJ6 478 aa6.39□□□□□ -1.39
PSEN1-209ENST00000553855 S4R3C0 116 aa6.39□□□□□ -1.39
PSEN1-209ENST00000553855 TMEM56-RWDD3S4R434 201 aa6.39□□□□□ -1.39
PSEN1-209ENST00000553855 A0A0B4J293 547 aa6.38□□□□□ -1.39
PSEN1-209ENST00000553855 RPS10-NUDT3A0A1W2PQS6 291 aa6.38□□□□□ -1.39
PSEN1-209ENST00000553855 MFSD2BA6NFX1 497 aa6.38□□□□□ -1.39
PSEN1-209ENST00000553855 DBX1A6NMT0 343 aa6.38□□□□□ -1.39
PSEN1-209ENST00000553855 PPP5D1E7EU14 171 aa6.38□□□□□ -1.39
PSEN1-209ENST00000553855 BMPR1BO00238 502 aa6.38□□□□□ -1.39
PSEN1-209ENST00000553855 TGOLN2O43493 480 aa6.38□□□□□ -1.39
PSEN1-209ENST00000553855 GNG7O60262 68 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms