RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 REEP1Q9H902 201 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 TAF9BQ9HBM6 251 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 PRTFDC1Q9NRG1 225 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 UBQLN4Q9NRR5 601 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 CISHQ9NSE2 258 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 LYRM2Q9NU23 88 aaPredicted RBP1.39□□□□□ -2.19
VRK1-202ENST00000553683 FBXL12Q9NXK8 326 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 HIGD1AQ9Y241 93 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 PKIGQ9Y2B9 76 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 HDGFL3Q9Y3E1 203 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 LSM5Q9Y4Y9 91 aaKnown RBP1.39□□□□□ -2.19
VRK1-202ENST00000553683 AP4S1Q9Y587 144 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 TMEM131LA2VDJ0 1609 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 ABCC5O15440 1437 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 DAPK1P53355 1430 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 TROQ12816 1431 aaPredicted RBP1.39□□□□□ -2.19
VRK1-202ENST00000553683 IQGAP1P46940 1657 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 MYO9AB2RTY4 2548 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 KIF1BO60333 1816 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 DENND4BO75064 1496 aaPredicted RBP1.38□□□□□ -2.19
VRK1-202ENST00000553683 ATP10BO94823 1461 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 FYCO1Q9BQS8 1478 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 NBEAQ8NFP9 2946 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 TONSLQ96HA7 1378 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 IGHV1-3A0A0C4DH29 117 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 FAM236DA0A1B0GTK5 79 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 PNMA8CA0A1B0GUJ8 204 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 LOC102725191A0A1B0GVB3 256 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 DUXBA0A1W2PPF3 345 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 DHRS12A0PJE2 317 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 DAPL1A0PJW8 107 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 MYBPHLA2RUH7 354 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 NCBP2LA6PVI3 153 aaKnown RBP1.38□□□□□ -2.19
VRK1-202ENST00000553683 EEF1E1-BLOC1S5C9J1V9 151 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 D6RAR5 112 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 INMT-MINDY4F8WBC2 141 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 H7BYZ3 331 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 J3KT08 172 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 EEF1E1O43324 174 aaKnown RBP1.38□□□□□ -2.19
VRK1-202ENST00000553683 PGLYRP1O75594 196 aaPredicted RBP1.38□□□□□ -2.19
VRK1-202ENST00000553683 SOX14O95416 240 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 LSM8O95777 96 aaKnown RBP1.38□□□□□ -2.19
VRK1-202ENST00000553683 LHBP01229 141 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 IGLV3-25P01717 112 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 APOA2P02652 100 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 APOC3P02656 99 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 MT-ND4LP03901 98 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 MAS1P04201 325 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 CSN2P05814 226 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 CTSDP07339 412 aaPredicted RBP1.38□□□□□ -2.19
VRK1-202ENST00000553683 NMBP08949 121 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 LGALS1P09382 135 aaKnown RBP1.38□□□□□ -2.19
VRK1-202ENST00000553683 ZNF728P0DKX0 622 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 FAM236CP0DP71 79 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 MYL9P24844 172 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 CNTFRP26992 372 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 ATP6V0CP27449 155 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 TSPOP30536 169 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 AGTR1P30556 359 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 RPA3P35244 121 aaPredicted RBP1.38□□□□□ -2.19
VRK1-202ENST00000553683 MPV17P39210 176 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 FABP6P51161 128 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 RND2P52198 227 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 POLR2HP52434 150 aaKnown RBP1.38□□□□□ -2.19
VRK1-202ENST00000553683 FOXA1P55317 472 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 CTBP2P56545 445 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 NDUFA6P56556 154 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 TAS2R20P59543 309 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 NCS1P62166 190 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 TMEM267Q0VDI3 215 aaPredicted RBP1.38□□□□□ -2.19
VRK1-202ENST00000553683 LAMTOR4Q0VGL1 99 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 PMAIP1Q13794 54 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 ENDOGQ14249 297 aaKnown RBP1.38□□□□□ -2.19
VRK1-202ENST00000553683 SSX1Q16384 188 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 CLEC12BQ2HXU8 276 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 CEACAM16Q2WEN9 425 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 TDRG1Q3Y452 100 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 NXNL2Q5VZ03 156 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 IZUMO2Q6UXV1 221 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 GOLT1AQ6ZVE7 132 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 ZNF720Q7Z2F6 126 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 GKN2Q86XP6 184 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 C20orf196Q8IYI0 205 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 HIST3H2BBQ8N257 126 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 FAM24BQ8N5W8 94 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 YIPF7Q8N8F6 280 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 TMEM229BQ8NBD8 167 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 GPR26Q8NDV2 337 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 OR8G5Q8NG78 346 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 OR5A2Q8NGI9 324 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 OR51A2Q8NGJ7 313 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 OR2T27Q8NH04 317 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 OR1S1Q8NH92 325 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 OR1L1Q8NH94 360 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 ZNF502Q8TBZ5 544 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 BLNKQ8WV28 456 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 PP6455Q8WZ26 134 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 BORCS7Q96B45 105 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 PLEKHB2Q96CS7 222 aa1.38□□□□□ -2.19
VRK1-202ENST00000553683 DYNLL2Q96FJ2 89 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms