RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 IGHV7-4-1A0A0J9YVY3 117 aa11.24□□□□□ -0.61
SDR39U1-205ENST00000553546 INS-IGF2F8WCM5 200 aa11.24□□□□□ -0.61
SDR39U1-205ENST00000553546 ZNF207O43670 478 aaKnown RBP11.24□□□□□ -0.61
SDR39U1-205ENST00000553546 B3GALNT1O75752 331 aa11.24□□□□□ -0.61
SDR39U1-205ENST00000553546 YIF1AO95070 293 aa11.24□□□□□ -0.61
SDR39U1-205ENST00000553546 CD3DP04234 171 aa11.24□□□□□ -0.61
SDR39U1-205ENST00000553546 CD5P06127 495 aa11.24□□□□□ -0.61
SDR39U1-205ENST00000553546 CTSDP07339 412 aaPredicted RBP11.24□□□□□ -0.61
SDR39U1-205ENST00000553546 SNCAP37840 140 aa11.24□□□□□ -0.61
SDR39U1-205ENST00000553546 NPBWR1P48145 328 aa11.24□□□□□ -0.61
SDR39U1-205ENST00000553546 TAS2R19P59542 299 aa11.24□□□□□ -0.61
SDR39U1-205ENST00000553546 ODF3L2Q3SX64 289 aa11.24□□□□□ -0.61
SDR39U1-205ENST00000553546 STPG3Q8N7X2 389 aa11.24□□□□□ -0.61
SDR39U1-205ENST00000553546 SLC35G3Q8N808 338 aa11.24□□□□□ -0.61
SDR39U1-205ENST00000553546 TMEM116Q8NCL8 245 aa11.24□□□□□ -0.61
SDR39U1-205ENST00000553546 PINX1Q96BK5 328 aaKnown RBP11.24□□□□□ -0.61
SDR39U1-205ENST00000553546 GINS3Q9BRX5 216 aa11.24□□□□□ -0.61
SDR39U1-205ENST00000553546 RHPN1-AS1Q9BWJ2 59 aa11.24□□□□□ -0.61
SDR39U1-205ENST00000553546 COPZ2Q9P299 210 aa11.24□□□□□ -0.61
SDR39U1-205ENST00000553546 TRAV14DV4A0A0A6YYC5 116 aa11.23□□□□□ -0.61
SDR39U1-205ENST00000553546 C3orf85A0A1B0GTC6 90 aa11.23□□□□□ -0.61
SDR39U1-205ENST00000553546 CORTO00230 105 aa11.23□□□□□ -0.61
SDR39U1-205ENST00000553546 SPRY2O43597 315 aa11.23□□□□□ -0.61
SDR39U1-205ENST00000553546 SMIM18P0DKX4 95 aa11.23□□□□□ -0.61
SDR39U1-205ENST00000553546 PI3P19957 117 aa11.23□□□□□ -0.61
SDR39U1-205ENST00000553546 PPP5CP53041 499 aa11.23□□□□□ -0.61
SDR39U1-205ENST00000553546 SUB1P53999 127 aaKnown RBP eCLIP11.23□□□□□ -0.61
SDR39U1-205ENST00000553546 SSBP1Q04837 148 aaKnown RBP11.23□□□□□ -0.61
SDR39U1-205ENST00000553546 GPR107Q5VW38 600 aa11.23□□□□□ -0.61
SDR39U1-205ENST00000553546 TMEM229BQ8NBD8 167 aa11.23□□□□□ -0.61
SDR39U1-205ENST00000553546 DUSP18Q8NEJ0 188 aa11.23□□□□□ -0.61
SDR39U1-205ENST00000553546 TERB2Q8NHR7 220 aa11.23□□□□□ -0.61
SDR39U1-205ENST00000553546 GALNT14Q96FL9 552 aa11.23□□□□□ -0.61
SDR39U1-205ENST00000553546 TP53RKQ96S44 253 aa11.23□□□□□ -0.61
SDR39U1-205ENST00000553546 RNF2Q99496 336 aa11.23□□□□□ -0.61
SDR39U1-205ENST00000553546 NAA50Q9GZZ1 169 aaKnown RBP11.23□□□□□ -0.61
SDR39U1-205ENST00000553546 CHEK1O14757 476 aa11.22□□□□□ -0.61
SDR39U1-205ENST00000553546 RAB3DO95716 219 aa11.22□□□□□ -0.61
SDR39U1-205ENST00000553546 IFNA17P01571 189 aa11.22□□□□□ -0.61
SDR39U1-205ENST00000553546 IGKV1-5P01602 117 aa11.22□□□□□ -0.61
SDR39U1-205ENST00000553546 CD74P04233 296 aa11.22□□□□□ -0.61
SDR39U1-205ENST00000553546 P0C879 139 aa11.22□□□□□ -0.61
SDR39U1-205ENST00000553546 MRPS10P82664 201 aaKnown RBP11.22□□□□□ -0.61
SDR39U1-205ENST00000553546 TRIM16LQ309B1 348 aa11.22□□□□□ -0.61
SDR39U1-205ENST00000553546 DEFB135Q30KP9 77 aa11.22□□□□□ -0.61
SDR39U1-205ENST00000553546 RRNAD1Q96FB5 475 aaKnown RBP11.22□□□□□ -0.61
SDR39U1-205ENST00000553546 ABHD1Q96SE0 405 aa11.22□□□□□ -0.61
SDR39U1-205ENST00000553546 GABARAPH6UMI1 98 aa11.21□□□□□ -0.61
SDR39U1-205ENST00000553546 ST8SIA3O43173 380 aa11.21□□□□□ -0.61
SDR39U1-205ENST00000553546 SCGB2A1O75556 95 aa11.21□□□□□ -0.61
SDR39U1-205ENST00000553546 HOXA1P49639 335 aaPredicted RBP11.21□□□□□ -0.61
SDR39U1-205ENST00000553546 PAFAH1B2P68402 229 aa11.21□□□□□ -0.61
SDR39U1-205ENST00000553546 TNFRSF9Q07011 255 aa11.21□□□□□ -0.61
SDR39U1-205ENST00000553546 IZUMO4Q1ZYL8 232 aa11.21□□□□□ -0.61
SDR39U1-205ENST00000553546 SCGB2B2Q4G0G5 96 aa11.21□□□□□ -0.61
SDR39U1-205ENST00000553546 STEAP1BQ6NZ63 245 aa11.21□□□□□ -0.61
SDR39U1-205ENST00000553546 ZNF600Q6ZNG1 722 aa11.21□□□□□ -0.61
SDR39U1-205ENST00000553546 OR13C8Q8NGS7 320 aa11.21□□□□□ -0.61
SDR39U1-205ENST00000553546 RNASE11Q8TAA1 199 aaKnown RBP11.21□□□□□ -0.61
SDR39U1-205ENST00000553546 ZNF414Q96IQ9 312 aa11.21□□□□□ -0.61
SDR39U1-205ENST00000553546 MRPS26Q9BYN8 205 aaKnown RBP11.21□□□□□ -0.61
SDR39U1-205ENST00000553546 ENY2Q9NPA8 101 aa11.21□□□□□ -0.61
SDR39U1-205ENST00000553546 A0A0B4J293 547 aa11.2□□□□□ -0.62
SDR39U1-205ENST00000553546 RGS5O15539 181 aa11.2□□□□□ -0.62
SDR39U1-205ENST00000553546 IGHV3-48P01763 117 aa11.2□□□□□ -0.62
SDR39U1-205ENST00000553546 ATF4P18848 351 aaPredicted RBP11.2□□□□□ -0.62
SDR39U1-205ENST00000553546 UCP1P25874 307 aa11.2□□□□□ -0.62
SDR39U1-205ENST00000553546 MEF2DQ14814 521 aa11.2□□□□□ -0.62
SDR39U1-205ENST00000553546 SPINK9Q5DT21 86 aa11.2□□□□□ -0.62
SDR39U1-205ENST00000553546 GPR141Q7Z602 305 aa11.2□□□□□ -0.62
SDR39U1-205ENST00000553546 LYG2Q86SG7 212 aa11.2□□□□□ -0.62
SDR39U1-205ENST00000553546 FAM219AQ8IW50 185 aa11.2□□□□□ -0.62
SDR39U1-205ENST00000553546 TMEM217Q8N7C4 229 aa11.2□□□□□ -0.62
SDR39U1-205ENST00000553546 RNF183Q96D59 192 aa11.2□□□□□ -0.62
SDR39U1-205ENST00000553546 TMEM231Q9H6L2 316 aa11.2□□□□□ -0.62
SDR39U1-205ENST00000553546 C14orf166Q9Y224 244 aaKnown RBP11.2□□□□□ -0.62
SDR39U1-205ENST00000553546 PCLOQ9Y6V0 5065 aa11.19□□□□□ -0.62
SDR39U1-205ENST00000553546 IGHV3-49A0A0A0MS15 119 aa11.19□□□□□ -0.62
SDR39U1-205ENST00000553546 A0A0J9YWU9 116 aa11.19□□□□□ -0.62
SDR39U1-205ENST00000553546 CXorf65A6NEN9 183 aa11.19□□□□□ -0.62
SDR39U1-205ENST00000553546 NUPR2A6NF83 97 aa11.19□□□□□ -0.62
SDR39U1-205ENST00000553546 RPL35AP18077 110 aaKnown RBP11.19□□□□□ -0.62
SDR39U1-205ENST00000553546 SURF2Q15527 256 aaPredicted RBP11.19□□□□□ -0.62
SDR39U1-205ENST00000553546 FAM90A2PQ658T7 463 aa11.19□□□□□ -0.62
SDR39U1-205ENST00000553546 PVRIGQ6DKI7 326 aa11.19□□□□□ -0.62
SDR39U1-205ENST00000553546 TOMM20LQ6UXN7 152 aa11.19□□□□□ -0.62
SDR39U1-205ENST00000553546 OR4D10Q8NGI6 311 aa11.19□□□□□ -0.62
SDR39U1-205ENST00000553546 MARCH1Q8TCQ1 289 aa11.19□□□□□ -0.62
SDR39U1-205ENST00000553546 MAP6D1Q9H9H5 199 aa11.19□□□□□ -0.62
SDR39U1-205ENST00000553546 RABL2AQ9UBK7 228 aaPredicted RBP11.19□□□□□ -0.62
SDR39U1-205ENST00000553546 RABL2BQ9UNT1 228 aa11.19□□□□□ -0.62
SDR39U1-205ENST00000553546 PLECQ15149 4684 aaKnown RBP11.19□□□□□ -0.62
SDR39U1-205ENST00000553546 DISC1C4P0D8 188 aa11.18□□□□□ -0.62
SDR39U1-205ENST00000553546 RNASE2P10153 161 aaKnown RBP11.18□□□□□ -0.62
SDR39U1-205ENST00000553546 ETV6P41212 452 aa11.18□□□□□ -0.62
SDR39U1-205ENST00000553546 TFPI2P48307 235 aa11.18□□□□□ -0.62
SDR39U1-205ENST00000553546 SP6Q3SY56 376 aa11.18□□□□□ -0.62
SDR39U1-205ENST00000553546 TCF24Q7RTU0 167 aa11.18□□□□□ -0.62
SDR39U1-205ENST00000553546 APRG1Q8IVJ8 170 aa11.18□□□□□ -0.62
SDR39U1-205ENST00000553546 SMIM4Q8WVI0 70 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms