RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 WDR83OSQ9Y284 106 aa9.63□□□□□ -0.87
SYNE2-208ENST00000553289 AHCTF1Q8WYP5 2266 aa9.63□□□□□ -0.87
SYNE2-208ENST00000553289 C19orf67A6NJJ6 358 aa9.63□□□□□ -0.87
SYNE2-208ENST00000553289 H0YIZ8 118 aa9.63□□□□□ -0.87
SYNE2-208ENST00000553289 M0R381 172 aa9.63□□□□□ -0.87
SYNE2-208ENST00000553289 DEPPQ9NTK1 212 aa9.63□□□□□ -0.87
SYNE2-208ENST00000553289 FABP5P3A8MUU1 101 aa9.63□□□□□ -0.87
SYNE2-208ENST00000553289 H3BRM9 83 aa9.63□□□□□ -0.87
SYNE2-208ENST00000553289 MYOD1P15172 320 aa9.63□□□□□ -0.87
SYNE2-208ENST00000553289 DUTP33316 252 aaKnown RBP9.63□□□□□ -0.87
SYNE2-208ENST00000553289 SUMO2P61956 95 aaKnown RBP9.63□□□□□ -0.87
SYNE2-208ENST00000553289 TMEM170BQ5T4T1 132 aa9.63□□□□□ -0.87
SYNE2-208ENST00000553289 LHFPL1Q86WI0 220 aa9.63□□□□□ -0.87
SYNE2-208ENST00000553289 C17orf82Q86X59 251 aaPredicted RBP9.63□□□□□ -0.87
SYNE2-208ENST00000553289 PF4P02776 101 aa9.63□□□□□ -0.87
SYNE2-208ENST00000553289 A0A0A6YYD4 124 aa9.62□□□□□ -0.87
SYNE2-208ENST00000553289 HIGD1CA8MV81 97 aa9.62□□□□□ -0.87
SYNE2-208ENST00000553289 DNAL4O96015 105 aa9.62□□□□□ -0.87
SYNE2-208ENST00000553289 OR4X2Q8NGF9 303 aa9.62□□□□□ -0.87
SYNE2-208ENST00000553289 TMEM242Q9NWH2 141 aa9.62□□□□□ -0.87
SYNE2-208ENST00000553289 ZNF319Q9P2F9 582 aa9.62□□□□□ -0.87
SYNE2-208ENST00000553289 EPDR1Q9UM22 224 aa9.62□□□□□ -0.87
SYNE2-208ENST00000553289 C9JCJ5 164 aa9.62□□□□□ -0.87
SYNE2-208ENST00000553289 ZNF600Q6ZNG1 722 aa9.62□□□□□ -0.87
SYNE2-208ENST00000553289 PEMTQ9UBM1 199 aa9.62□□□□□ -0.87
SYNE2-208ENST00000553289 ZNF257Q9Y2Q1 563 aa9.62□□□□□ -0.87
SYNE2-208ENST00000553289 DOCK4Q8N1I0 1966 aa9.62□□□□□ -0.87
SYNE2-208ENST00000553289 IGHV3OR16-10A0A075B7F0 116 aa9.62□□□□□ -0.87
SYNE2-208ENST00000553289 TRAV8-6A0A0B4J262 113 aa9.62□□□□□ -0.87
SYNE2-208ENST00000553289 IGHV3-23P01764 117 aa9.62□□□□□ -0.87
SYNE2-208ENST00000553289 CLEC19AQ6UXS0 136 aa9.62□□□□□ -0.87
SYNE2-208ENST00000553289 RNF125Q96EQ8 232 aa9.62□□□□□ -0.87
SYNE2-208ENST00000553289 FAM186AA6NE01 2351 aa9.62□□□□□ -0.87
SYNE2-208ENST00000553289 IGHV3OR16-13A0A075B7E8 117 aa9.62□□□□□ -0.87
SYNE2-208ENST00000553289 IGHV3-74A0A0B4J1X5 117 aa9.62□□□□□ -0.87
SYNE2-208ENST00000553289 PPBPP02775 128 aa9.62□□□□□ -0.87
SYNE2-208ENST00000553289 CCL3L1P16619 93 aa9.62□□□□□ -0.87
SYNE2-208ENST00000553289 NUP37Q8NFH4 326 aa9.62□□□□□ -0.87
SYNE2-208ENST00000553289 CHD5Q8TDI0 1954 aa9.61□□□□□ -0.87
SYNE2-208ENST00000553289 NYNRINQ9P2P1 1898 aaKnown RBP9.61□□□□□ -0.87
SYNE2-208ENST00000553289 IGHV1-18A0A0C4DH31 117 aa9.61□□□□□ -0.87
SYNE2-208ENST00000553289 A0A1B0GW64 132 aa9.61□□□□□ -0.87
SYNE2-208ENST00000553289 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.61□□□□□ -0.87
SYNE2-208ENST00000553289 SVILO95425 2214 aa9.61□□□□□ -0.87
SYNE2-208ENST00000553289 LDLRAD4O15165 306 aa9.61□□□□□ -0.87
SYNE2-208ENST00000553289 NABP1Q96AH0 204 aa9.61□□□□□ -0.87
SYNE2-208ENST00000553289 TRAV1-1A0A0B4J248 108 aa9.61□□□□□ -0.87
SYNE2-208ENST00000553289 IL18BPO95998 194 aa9.61□□□□□ -0.87
SYNE2-208ENST00000553289 MST1P26927 711 aa9.61□□□□□ -0.87
SYNE2-208ENST00000553289 ATRAIDQ6UW56 229 aa9.61□□□□□ -0.87
SYNE2-208ENST00000553289 FOXC2Q99958 501 aa9.61□□□□□ -0.87
SYNE2-208ENST00000553289 GSN-AS1Q9NRJ2 163 aa9.61□□□□□ -0.87
SYNE2-208ENST00000553289 E9PLN8 166 aa9.61□□□□□ -0.87
SYNE2-208ENST00000553289 HAX1O00165 279 aa9.61□□□□□ -0.87
SYNE2-208ENST00000553289 C18orf15Q96N68 181 aa9.61□□□□□ -0.87
SYNE2-208ENST00000553289 VKORC1Q9BQB6 163 aa9.61□□□□□ -0.87
SYNE2-208ENST00000553289 LTBP1Q14766 1721 aa9.6□□□□□ -0.87
SYNE2-208ENST00000553289 CACNA1IQ9P0X4 2223 aa9.6□□□□□ -0.87
SYNE2-208ENST00000553289 TIMP3P35625 211 aa9.6□□□□□ -0.87
SYNE2-208ENST00000553289 LEPP41159 167 aa9.6□□□□□ -0.87
SYNE2-208ENST00000553289 CACNG7P62955 275 aa9.6□□□□□ -0.87
SYNE2-208ENST00000553289 OR10J3Q5JRS4 329 aa9.6□□□□□ -0.87
SYNE2-208ENST00000553289 MRAP2Q96G30 205 aa9.6□□□□□ -0.87
SYNE2-208ENST00000553289 GNB1LQ9BYB4 327 aa9.6□□□□□ -0.87
SYNE2-208ENST00000553289 LINC01549A6NIU2 74 aa9.6□□□□□ -0.87
SYNE2-208ENST00000553289 RAMP3O60896 148 aa9.6□□□□□ -0.87
SYNE2-208ENST00000553289 GATA2P23769 480 aaPredicted RBP9.6□□□□□ -0.87
SYNE2-208ENST00000553289 TTC32Q5I0X7 151 aa9.6□□□□□ -0.87
SYNE2-208ENST00000553289 TMEM105Q8N8V8 129 aa9.6□□□□□ -0.87
SYNE2-208ENST00000553289 C7orf69Q9H7B7 122 aa9.6□□□□□ -0.87
SYNE2-208ENST00000553289 SPRR3Q9UBC9 169 aa9.6□□□□□ -0.87
SYNE2-208ENST00000553289 SCN2AQ99250 2005 aa9.6□□□□□ -0.87
SYNE2-208ENST00000553289 SRRM5B3KS81 715 aa9.6□□□□□ -0.87
SYNE2-208ENST00000553289 IGKV3-20P01619 116 aa9.6□□□□□ -0.87
SYNE2-208ENST00000553289 ATP5L2Q7Z4Y8 100 aa9.6□□□□□ -0.87
SYNE2-208ENST00000553289 GGNQ86UU5 652 aa9.6□□□□□ -0.87
SYNE2-208ENST00000553289 DUX3Q96PT4 197 aa9.6□□□□□ -0.87
SYNE2-208ENST00000553289 MRPL16Q9NX20 251 aaKnown RBP9.6□□□□□ -0.87
SYNE2-208ENST00000553289 EFNB3Q15768 340 aa9.6□□□□□ -0.87
SYNE2-208ENST00000553289 VCX2Q9H322 139 aa9.6□□□□□ -0.87
SYNE2-208ENST00000553289 JKAMPQ9P055 326 aa9.6□□□□□ -0.87
SYNE2-208ENST00000553289 A0A1B0GV90 55 aa9.59□□□□□ -0.87
SYNE2-208ENST00000553289 LOC105371267A0A1B0GV96 52 aa9.59□□□□□ -0.87
SYNE2-208ENST00000553289 DUSP14O95147 198 aaKnown RBP9.59□□□□□ -0.87
SYNE2-208ENST00000553289 NRN1Q9NPD7 142 aa9.59□□□□□ -0.87
SYNE2-208ENST00000553289 IGHV3-66A0A0C4DH42 116 aa9.59□□□□□ -0.87
SYNE2-208ENST00000553289 SERF1AO75920 110 aa9.59□□□□□ -0.87
SYNE2-208ENST00000553289 NPFFR1Q9GZQ6 430 aa9.59□□□□□ -0.87
SYNE2-208ENST00000553289 NXT2Q9NPJ8 142 aaKnown RBP9.59□□□□□ -0.87
SYNE2-208ENST00000553289 PLSCR4Q9NRQ2 329 aa9.59□□□□□ -0.87
SYNE2-208ENST00000553289 S4R3C0 116 aa9.59□□□□□ -0.87
SYNE2-208ENST00000553289 APC2O95996 2303 aa9.59□□□□□ -0.87
SYNE2-208ENST00000553289 IGHV3-49A0A0A0MS15 119 aa9.59□□□□□ -0.87
SYNE2-208ENST00000553289 IGKV1-12A0A0C4DH73 117 aa9.59□□□□□ -0.87
SYNE2-208ENST00000553289 IGKV1D-12P01611 117 aa9.59□□□□□ -0.87
SYNE2-208ENST00000553289 CD5P06127 495 aa9.59□□□□□ -0.87
SYNE2-208ENST00000553289 OR9G9P0C7N8 305 aa9.59□□□□□ -0.87
SYNE2-208ENST00000553289 GCSAMLQ5JQS6 135 aa9.59□□□□□ -0.87
SYNE2-208ENST00000553289 RPUSD1Q9UJJ7 312 aaKnown RBP9.59□□□□□ -0.87
SYNE2-208ENST00000553289 TET1Q8NFU7 2136 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms