RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 C19orf35Q6ZS72 473 aa15.52■□□□□ 0.08
RBFOX1-215ENST00000553186 PIFOQ8TCI5 191 aa15.52■□□□□ 0.08
RBFOX1-215ENST00000553186 SSMEM1Q8WWF3 244 aa15.52■□□□□ 0.08
RBFOX1-215ENST00000553186 TGFAP01135 160 aa15.52■□□□□ 0.07
RBFOX1-215ENST00000553186 H2AFB1P0C5Y9 115 aa15.52■□□□□ 0.07
RBFOX1-215ENST00000553186 IGHV4-31P0DP07 118 aa15.52■□□□□ 0.07
RBFOX1-215ENST00000553186 CX3CL1P78423 397 aa15.52■□□□□ 0.07
RBFOX1-215ENST00000553186 AKR1C1Q04828 323 aa15.52■□□□□ 0.07
RBFOX1-215ENST00000553186 TMEM249Q2WGJ8 235 aa15.52■□□□□ 0.07
RBFOX1-215ENST00000553186 UQCC3Q6UW78 93 aa15.52■□□□□ 0.07
RBFOX1-215ENST00000553186 TMEM144Q7Z5S9 345 aa15.52■□□□□ 0.07
RBFOX1-215ENST00000553186 RPP25LQ8N5L8 163 aaKnown RBP15.52■□□□□ 0.07
RBFOX1-215ENST00000553186 OR1P1Q8NH06 330 aa15.52■□□□□ 0.07
RBFOX1-215ENST00000553186 SOX21Q9Y651 276 aaPredicted RBP15.52■□□□□ 0.07
RBFOX1-215ENST00000553186 IGKV1OR2-108A0A075B7D4 117 aa15.51■□□□□ 0.07
RBFOX1-215ENST00000553186 RAB2AP61019 212 aa15.51■□□□□ 0.07
RBFOX1-215ENST00000553186 FFAR4Q5NUL3 377 aa15.51■□□□□ 0.07
RBFOX1-215ENST00000553186 SLC16A13Q7RTY0 426 aa15.51■□□□□ 0.07
RBFOX1-215ENST00000553186 RCC1LQ96I51 464 aaKnown RBP15.51■□□□□ 0.07
RBFOX1-215ENST00000553186 C1RLQ9NZP8 487 aa15.51■□□□□ 0.07
RBFOX1-215ENST00000553186 F11RQ9Y624 299 aaKnown RBP15.51■□□□□ 0.07
RBFOX1-215ENST00000553186 J3QLI3 93 aa15.51■□□□□ 0.07
RBFOX1-215ENST00000553186 OPRK1P41145 380 aa15.51■□□□□ 0.07
RBFOX1-215ENST00000553186 NDPQ00604 133 aa15.51■□□□□ 0.07
RBFOX1-215ENST00000553186 SSX7Q7RTT5 188 aa15.51■□□□□ 0.07
RBFOX1-215ENST00000553186 FAM103A1Q9BTL3 118 aaKnown RBP15.51■□□□□ 0.07
RBFOX1-215ENST00000553186 DMRT1Q9Y5R6 373 aa15.51■□□□□ 0.07
RBFOX1-215ENST00000553186 CCL20P78556 96 aa15.5■□□□□ 0.07
RBFOX1-215ENST00000553186 COMMD1Q8N668 190 aa15.5■□□□□ 0.07
RBFOX1-215ENST00000553186 SFT2D1Q8WV19 159 aa15.5■□□□□ 0.07
RBFOX1-215ENST00000553186 SCRT1Q9BWW7 348 aa15.5■□□□□ 0.07
RBFOX1-215ENST00000553186 CREBBPQ92793 2442 aa15.5■□□□□ 0.07
RBFOX1-215ENST00000553186 UNC79Q9P2D8 2635 aa15.5■□□□□ 0.07
RBFOX1-215ENST00000553186 ABCA1O95477 2261 aa15.49■□□□□ 0.07
RBFOX1-215ENST00000553186 TRAV1-1A0A0B4J248 108 aa15.49■□□□□ 0.07
RBFOX1-215ENST00000553186 A0A1B0GV50 99 aa15.49■□□□□ 0.07
RBFOX1-215ENST00000553186 MBP02144 154 aa15.49■□□□□ 0.07
RBFOX1-215ENST00000553186 OR2T6Q8NHC8 308 aa15.49■□□□□ 0.07
RBFOX1-215ENST00000553186 LINC00052Q96N35 136 aa15.49■□□□□ 0.07
RBFOX1-215ENST00000553186 CTRB1P17538 263 aa15.49■□□□□ 0.07
RBFOX1-215ENST00000553186 CTRB2Q6GPI1 263 aa15.49■□□□□ 0.07
RBFOX1-215ENST00000553186 BPIFCQ8NFQ6 507 aa15.49■□□□□ 0.07
RBFOX1-215ENST00000553186 MBD3L1Q8WWY6 194 aa15.49■□□□□ 0.07
RBFOX1-215ENST00000553186 ARPC1AQ92747 370 aa15.49■□□□□ 0.07
RBFOX1-215ENST00000553186 PDZD2O15018 2839 aa15.48■□□□□ 0.07
RBFOX1-215ENST00000553186 IGHV7-81A0A0B4J1V7 117 aa15.48■□□□□ 0.07
RBFOX1-215ENST00000553186 SOX15O60248 233 aa15.48■□□□□ 0.07
RBFOX1-215ENST00000553186 YIF1AO95070 293 aa15.48■□□□□ 0.07
RBFOX1-215ENST00000553186 HLA-DRB1P01911 266 aa15.48■□□□□ 0.07
RBFOX1-215ENST00000553186 CRYGCP07315 174 aa15.48■□□□□ 0.07
RBFOX1-215ENST00000553186 MIC13Q5XKP0 118 aa15.48■□□□□ 0.07
RBFOX1-215ENST00000553186 OR10G4Q8NGN3 311 aa15.48■□□□□ 0.07
RBFOX1-215ENST00000553186 OR10G9Q8NGN4 311 aa15.48■□□□□ 0.07
RBFOX1-215ENST00000553186 OR10G7Q8NGN6 311 aa15.48■□□□□ 0.07
RBFOX1-215ENST00000553186 FAM96BQ9Y3D0 163 aa15.48■□□□□ 0.07
RBFOX1-215ENST00000553186 PXMP4Q9Y6I8 212 aa15.48■□□□□ 0.07
RBFOX1-215ENST00000553186 ZFHX3Q15911 3703 aa15.48■□□□□ 0.07
RBFOX1-215ENST00000553186 CR1P17927 2039 aa15.48■□□□□ 0.07
RBFOX1-215ENST00000553186 ASPHD1Q5U4P2 390 aa15.48■□□□□ 0.07
RBFOX1-215ENST00000553186 LFNGQ8NES3 379 aa15.48■□□□□ 0.07
RBFOX1-215ENST00000553186 ABHD5Q8WTS1 349 aa15.48■□□□□ 0.07
RBFOX1-215ENST00000553186 MRPL36Q9P0J6 103 aaKnown RBP15.48■□□□□ 0.07
RBFOX1-215ENST00000553186 BTBD17A6NE02 478 aa15.47■□□□□ 0.07
RBFOX1-215ENST00000553186 CD5P06127 495 aa15.47■□□□□ 0.07
RBFOX1-215ENST00000553186 ZP3P21754 424 aa15.47■□□□□ 0.07
RBFOX1-215ENST00000553186 RPL29P47914 159 aaKnown RBP15.47■□□□□ 0.07
RBFOX1-215ENST00000553186 RAB31Q13636 194 aa15.47■□□□□ 0.07
RBFOX1-215ENST00000553186 GCSAMLQ5JQS6 135 aa15.47■□□□□ 0.07
RBFOX1-215ENST00000553186 MISP3Q96FF7 219 aa15.47■□□□□ 0.07
RBFOX1-215ENST00000553186 SLC35E1Q96K37 410 aa15.47■□□□□ 0.07
RBFOX1-215ENST00000553186 SSX3Q99909 188 aa15.47■□□□□ 0.07
RBFOX1-215ENST00000553186 WNT10AQ9GZT5 417 aa15.47■□□□□ 0.07
RBFOX1-215ENST00000553186 TMEM231Q9H6L2 316 aa15.47■□□□□ 0.07
RBFOX1-215ENST00000553186 KRBOX1C9JBD0 128 aa15.46■□□□□ 0.07
RBFOX1-215ENST00000553186 IGHV3-48P01763 117 aa15.46■□□□□ 0.07
RBFOX1-215ENST00000553186 EGR2P11161 476 aaPredicted RBP15.46■□□□□ 0.07
RBFOX1-215ENST00000553186 PRR20EP86478 221 aa15.46■□□□□ 0.07
RBFOX1-215ENST00000553186 PRR20CP86479 221 aa15.46■□□□□ 0.07
RBFOX1-215ENST00000553186 PRR20DP86480 221 aa15.46■□□□□ 0.07
RBFOX1-215ENST00000553186 PRR20BP86481 221 aa15.46■□□□□ 0.07
RBFOX1-215ENST00000553186 PRR20AP86496 221 aa15.46■□□□□ 0.07
RBFOX1-215ENST00000553186 WFDC11Q8NEX6 87 aa15.46■□□□□ 0.07
RBFOX1-215ENST00000553186 SLC45A2Q9UMX9 530 aa15.46■□□□□ 0.07
RBFOX1-215ENST00000553186 PRRC2AP48634 2157 aaKnown RBP15.46■□□□□ 0.07
RBFOX1-215ENST00000553186 ITPR2Q14571 2701 aa15.46■□□□□ 0.07
RBFOX1-215ENST00000553186 CORTO00230 105 aa15.46■□□□□ 0.07
RBFOX1-215ENST00000553186 FBP1P09467 338 aa15.46■□□□□ 0.07
RBFOX1-215ENST00000553186 DEFA4P12838 97 aa15.46■□□□□ 0.07
RBFOX1-215ENST00000553186 ACOT6Q3I5F7 207 aaPredicted RBP15.46■□□□□ 0.07
RBFOX1-215ENST00000553186 LCN15Q6UWW0 184 aa15.46■□□□□ 0.07
RBFOX1-215ENST00000553186 STPG3Q8N7X2 389 aa15.46■□□□□ 0.07
RBFOX1-215ENST00000553186 ACY3Q96HD9 319 aa15.46■□□□□ 0.07
RBFOX1-215ENST00000553186 RBM14Q96PK6 669 aaKnown RBP15.46■□□□□ 0.07
RBFOX1-215ENST00000553186 RASL11BQ9BPW5 248 aa15.46■□□□□ 0.07
RBFOX1-215ENST00000553186 HSPB9Q9BQS6 159 aa15.46■□□□□ 0.07
RBFOX1-215ENST00000553186 KCNIP2Q9NS61 270 aa15.46■□□□□ 0.07
RBFOX1-215ENST00000553186 CSPG4Q6UVK1 2322 aa15.46■□□□□ 0.06
RBFOX1-215ENST00000553186 EIF3GO75821 320 aaKnown RBP eCLIP15.45■□□□□ 0.06
RBFOX1-215ENST00000553186 HBE1P02100 147 aa15.45■□□□□ 0.06
RBFOX1-215ENST00000553186 B2MP61769 119 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms