RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 IGHV3OR15-7A0A075B7D8 119 aa3.99□□□□□ -1.77
LIMA1-214ENST00000552783 TRGV10A0A0A0MS01 117 aa3.99□□□□□ -1.77
LIMA1-214ENST00000552783 hDV102S1A0JD36 115 aa3.99□□□□□ -1.77
LIMA1-214ENST00000552783 HELTA6NFD8 242 aa3.99□□□□□ -1.77
LIMA1-214ENST00000552783 CBY3A6NI87 242 aa3.99□□□□□ -1.77
LIMA1-214ENST00000552783 C2orf70A6NJV1 201 aa3.99□□□□□ -1.77
LIMA1-214ENST00000552783 ITGB1BP1O14713 200 aa3.99□□□□□ -1.77
LIMA1-214ENST00000552783 SPRY3O43610 288 aa3.99□□□□□ -1.77
LIMA1-214ENST00000552783 PRB4P10163 310 aaPredicted RBP3.99□□□□□ -1.77
LIMA1-214ENST00000552783 MGST1P10620 155 aaKnown RBP3.99□□□□□ -1.77
LIMA1-214ENST00000552783 SRSF6Q13247 344 aaKnown RBP3.99□□□□□ -1.77
LIMA1-214ENST00000552783 ZNF146Q15072 292 aa3.99□□□□□ -1.77
LIMA1-214ENST00000552783 ZNF738Q8NE65 137 aa3.99□□□□□ -1.77
LIMA1-214ENST00000552783 DEFB124Q8NES8 71 aa3.99□□□□□ -1.77
LIMA1-214ENST00000552783 C11orf52Q96A22 123 aa3.99□□□□□ -1.77
LIMA1-214ENST00000552783 GCM1Q9NP62 436 aa3.99□□□□□ -1.77
LIMA1-214ENST00000552783 SAA2-SAA4A0A096LPE2 208 aa3.98□□□□□ -1.77
LIMA1-214ENST00000552783 TRAV5A0A0B4J249 113 aa3.98□□□□□ -1.77
LIMA1-214ENST00000552783 TMEM30CPA0ZSE6 113 aa3.98□□□□□ -1.77
LIMA1-214ENST00000552783 FAM181BA6NEQ2 426 aa3.98□□□□□ -1.77
LIMA1-214ENST00000552783 RNF212BA8MTL3 300 aa3.98□□□□□ -1.77
LIMA1-214ENST00000552783 M0R1B8 84 aa3.98□□□□□ -1.77
LIMA1-214ENST00000552783 M0R1X1 148 aa3.98□□□□□ -1.77
LIMA1-214ENST00000552783 CORTO00230 105 aa3.98□□□□□ -1.77
LIMA1-214ENST00000552783 SPINT2O43291 252 aa3.98□□□□□ -1.77
LIMA1-214ENST00000552783 LINC00869P0C866 280 aa3.98□□□□□ -1.77
LIMA1-214ENST00000552783 MPV17P39210 176 aa3.98□□□□□ -1.77
LIMA1-214ENST00000552783 CA7P43166 264 aa3.98□□□□□ -1.77
LIMA1-214ENST00000552783 GPR12P47775 334 aa3.98□□□□□ -1.77
LIMA1-214ENST00000552783 GNG4P50150 75 aa3.98□□□□□ -1.77
LIMA1-214ENST00000552783 ERVK-16P61578 105 aa3.98□□□□□ -1.77
LIMA1-214ENST00000552783 OR10J3Q5JRS4 329 aa3.98□□□□□ -1.77
LIMA1-214ENST00000552783 Q71RC1 249 aaPredicted RBP3.98□□□□□ -1.77
LIMA1-214ENST00000552783 C11orf53Q8IXP5 236 aa3.98□□□□□ -1.77
LIMA1-214ENST00000552783 OR4C5Q8NGB2 326 aa3.98□□□□□ -1.77
LIMA1-214ENST00000552783 OR4A16Q8NH70 328 aa3.98□□□□□ -1.77
LIMA1-214ENST00000552783 LRRC29Q8WV35 223 aa3.98□□□□□ -1.77
LIMA1-214ENST00000552783 PKIBQ9C010 78 aa3.98□□□□□ -1.77
LIMA1-214ENST00000552783 ZNF355PQ9NSJ1 428 aa3.98□□□□□ -1.77
LIMA1-214ENST00000552783 C9JCJ5 164 aa3.98□□□□□ -1.77
LIMA1-214ENST00000552783 H0YJW9 148 aa3.98□□□□□ -1.77
LIMA1-214ENST00000552783 TAX1BP3O14907 124 aa3.98□□□□□ -1.77
LIMA1-214ENST00000552783 CYC1P08574 325 aa3.98□□□□□ -1.77
LIMA1-214ENST00000552783 DUTP33316 252 aaKnown RBP3.98□□□□□ -1.77
LIMA1-214ENST00000552783 MORN2Q502X0 79 aa3.98□□□□□ -1.77
LIMA1-214ENST00000552783 STUMQ69YW2 141 aa3.98□□□□□ -1.77
LIMA1-214ENST00000552783 ZNF841Q6ZN19 808 aa3.98□□□□□ -1.77
LIMA1-214ENST00000552783 MOB1BQ7L9L4 216 aa3.98□□□□□ -1.77
LIMA1-214ENST00000552783 MUC15Q8N387 334 aa3.98□□□□□ -1.77
LIMA1-214ENST00000552783 SLC24A4Q8NFF2 622 aa3.98□□□□□ -1.77
LIMA1-214ENST00000552783 HSD17B10Q99714 261 aaKnown RBP3.98□□□□□ -1.77
LIMA1-214ENST00000552783 ENY2Q9NPA8 101 aa3.98□□□□□ -1.77
LIMA1-214ENST00000552783 TLN1Q9Y490 2541 aaKnown RBP3.98□□□□□ -1.77
LIMA1-214ENST00000552783 IGKV3D-15A0A087WSY6 115 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 APCSP02743 223 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 VAMP3Q15836 100 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 RNFT1Q5M7Z0 435 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 FAM201AQ5SY85 155 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 FAM120AOSQ5T036 256 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 VWA1Q6PCB0 445 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 KLF14Q8TD94 323 aaPredicted RBP3.97□□□□□ -1.77
LIMA1-214ENST00000552783 TMEM45BQ96B21 275 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 PMCHL2Q9BQD1 86 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 TNFRSF19Q9NS68 423 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 SLC35D1Q9NTN3 355 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 BET1LQ9NYM9 111 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 CLCF1Q9UBD9 225 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 MRPS16Q9Y3D3 137 aaKnown RBP3.97□□□□□ -1.77
LIMA1-214ENST00000552783 MUC21A0A0G2JKD1 596 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 MUC21A0A140T8X8 626 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 SMIM27A0A1W2PRY6 76 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 ZNF891A8MT65 544 aaPredicted RBP3.97□□□□□ -1.77
LIMA1-214ENST00000552783 A8MXE2 369 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 IGHV3-48P01763 117 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 AMY1AP04745 511 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 USF1P22415 310 aaPredicted RBP3.97□□□□□ -1.77
LIMA1-214ENST00000552783 TNFSF4P23510 183 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 ACP1P24666 158 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 CAMPP49913 170 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 ZNF138P52744 262 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 FOXA3P55318 350 aaPredicted RBP3.97□□□□□ -1.77
LIMA1-214ENST00000552783 PRR20EP86478 221 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 PRR20CP86479 221 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 PRR20DP86480 221 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 PRR20BP86481 221 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 PRR20AP86496 221 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 MUC21Q5SSG8 566 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 IBA57Q5T440 356 aaKnown RBP3.97□□□□□ -1.77
LIMA1-214ENST00000552783 AMMECR1LQ6DCA0 310 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 RNASEKQ6P5S7 137 aaKnown RBP3.97□□□□□ -1.77
LIMA1-214ENST00000552783 FDCSPQ8NFU4 85 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 IGF2BP2-AS1Q96M15 143 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 ZNRD1Q9P1U0 126 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 TCF19Q9Y242 345 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 DCHS2Q6V1P9 2916 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 MUC6Q6W4X9 2439 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 TRAV9-1A0A075B6T8 112 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 TRAV9-2A0A087WT02 112 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 IGHV1-69-2A0A0G2JMI3 117 aa3.97□□□□□ -1.77
LIMA1-214ENST00000552783 C21orf140B9A014 251 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms