RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 DMRT1Q9Y5R6 373 aa8.16□□□□□ -1.1
PTCH1-225ENST00000551845 S4R3C0 116 aa8.16□□□□□ -1.1
PTCH1-225ENST00000551845 KMT2CQ8NEZ4 4911 aaKnown RBP8.15□□□□□ -1.1
PTCH1-225ENST00000551845 TRAV6A0A075B6T7 132 aa8.15□□□□□ -1.1
PTCH1-225ENST00000551845 OR2C1O95371 312 aa8.15□□□□□ -1.1
PTCH1-225ENST00000551845 IFNA21P01568 189 aa8.15□□□□□ -1.1
PTCH1-225ENST00000551845 TRBV12-3P01733 135 aa8.15□□□□□ -1.1
PTCH1-225ENST00000551845 HOXB5P09067 269 aa8.15□□□□□ -1.1
PTCH1-225ENST00000551845 SLC25A6P12236 298 aa8.15□□□□□ -1.1
PTCH1-225ENST00000551845 ARL3P36405 182 aa8.15□□□□□ -1.1
PTCH1-225ENST00000551845 DHRS2Q13268 280 aa8.15□□□□□ -1.1
PTCH1-225ENST00000551845 ASAH1Q13510 395 aa8.15□□□□□ -1.1
PTCH1-225ENST00000551845 FAM106AQ4KMX7 169 aa8.15□□□□□ -1.1
PTCH1-225ENST00000551845 KPRPQ5T749 579 aaPredicted RBP8.15□□□□□ -1.1
PTCH1-225ENST00000551845 PLET1Q6UQ28 207 aa8.15□□□□□ -1.1
PTCH1-225ENST00000551845 LYG2Q86SG7 212 aa8.15□□□□□ -1.1
PTCH1-225ENST00000551845 ZNF114Q8NC26 417 aa8.15□□□□□ -1.1
PTCH1-225ENST00000551845 SCARB1Q8WTV0 552 aa8.15□□□□□ -1.1
PTCH1-225ENST00000551845 MISP3Q96FF7 219 aa8.15□□□□□ -1.1
PTCH1-225ENST00000551845 C20orf85Q9H1P6 137 aa8.15□□□□□ -1.1
PTCH1-225ENST00000551845 HEYLQ9NQ87 328 aaPredicted RBP8.15□□□□□ -1.1
PTCH1-225ENST00000551845 GAR1Q9NY12 217 aaKnown RBP8.15□□□□□ -1.1
PTCH1-225ENST00000551845 C21orf62Q9NYP8 219 aa8.15□□□□□ -1.1
PTCH1-225ENST00000551845 MFSD2BA6NFX1 497 aa8.14□□□□□ -1.11
PTCH1-225ENST00000551845 PPP5D1E7EU14 171 aa8.14□□□□□ -1.11
PTCH1-225ENST00000551845 CORTO00230 105 aa8.14□□□□□ -1.11
PTCH1-225ENST00000551845 SAP30O75446 220 aa8.14□□□□□ -1.11
PTCH1-225ENST00000551845 H2AFB2P0C5Z0 115 aa8.14□□□□□ -1.11
PTCH1-225ENST00000551845 HTR2BP41595 481 aa8.14□□□□□ -1.11
PTCH1-225ENST00000551845 MFAP2P55001 183 aa8.14□□□□□ -1.11
PTCH1-225ENST00000551845 SYNJ2BPP57105 145 aa8.14□□□□□ -1.11
PTCH1-225ENST00000551845 DEFA1P59665 94 aa8.14□□□□□ -1.11
PTCH1-225ENST00000551845 DEFA3P59666 94 aa8.14□□□□□ -1.11
PTCH1-225ENST00000551845 GGNBP1Q5YKI7 109 aa8.14□□□□□ -1.11
PTCH1-225ENST00000551845 ACSM6Q6P461 480 aa8.14□□□□□ -1.11
PTCH1-225ENST00000551845 NOXA1Q86UR1 476 aa8.14□□□□□ -1.11
PTCH1-225ENST00000551845 GPHB5Q86YW7 130 aa8.14□□□□□ -1.11
PTCH1-225ENST00000551845 OR9G4Q8NGQ1 327 aa8.14□□□□□ -1.11
PTCH1-225ENST00000551845 ZNF502Q8TBZ5 544 aa8.14□□□□□ -1.11
PTCH1-225ENST00000551845 PINX1Q96BK5 328 aaKnown RBP8.14□□□□□ -1.11
PTCH1-225ENST00000551845 ATP6V0BQ99437 205 aa8.14□□□□□ -1.11
PTCH1-225ENST00000551845 TXN2Q99757 166 aa8.14□□□□□ -1.11
PTCH1-225ENST00000551845 PEMTQ9UBM1 199 aa8.14□□□□□ -1.11
PTCH1-225ENST00000551845 TBC1D24Q9ULP9 559 aa8.14□□□□□ -1.11
PTCH1-225ENST00000551845 RYR3Q15413 4870 aa8.13□□□□□ -1.11
PTCH1-225ENST00000551845 IGHV3-21A0A0B4J1V1 117 aa8.13□□□□□ -1.11
PTCH1-225ENST00000551845 I3L2K1 104 aa8.13□□□□□ -1.11
PTCH1-225ENST00000551845 K7EIM0 57 aa8.13□□□□□ -1.11
PTCH1-225ENST00000551845 BMPR1BO00238 502 aa8.13□□□□□ -1.11
PTCH1-225ENST00000551845 PITX3O75364 302 aa8.13□□□□□ -1.11
PTCH1-225ENST00000551845 MED6O75586 246 aa8.13□□□□□ -1.11
PTCH1-225ENST00000551845 NXPH3O95157 252 aa8.13□□□□□ -1.11
PTCH1-225ENST00000551845 MT-CO2P00403 227 aa8.13□□□□□ -1.11
PTCH1-225ENST00000551845 MFAP4P55083 255 aa8.13□□□□□ -1.11
PTCH1-225ENST00000551845 ATP5IP56385 69 aaPredicted RBP8.13□□□□□ -1.11
PTCH1-225ENST00000551845 IFITM3Q01628 133 aa8.13□□□□□ -1.11
PTCH1-225ENST00000551845 TNFRSF9Q07011 255 aa8.13□□□□□ -1.11
PTCH1-225ENST00000551845 Q56UQ5 140 aa8.13□□□□□ -1.11
PTCH1-225ENST00000551845 UBAC2Q8NBM4 344 aa8.13□□□□□ -1.11
PTCH1-225ENST00000551845 DUSP18Q8NEJ0 188 aa8.13□□□□□ -1.11
PTCH1-225ENST00000551845 ENKURQ8TC29 256 aa8.13□□□□□ -1.11
PTCH1-225ENST00000551845 CCDC140Q96MF4 163 aa8.13□□□□□ -1.11
PTCH1-225ENST00000551845 NUDT15Q9NV35 164 aa8.13□□□□□ -1.11
PTCH1-225ENST00000551845 HSPB7Q9UBY9 170 aa8.13□□□□□ -1.11
PTCH1-225ENST00000551845 U3KQ87 197 aa8.13□□□□□ -1.11
PTCH1-225ENST00000551845 ZNF320A2RRD8 509 aa8.12□□□□□ -1.11
PTCH1-225ENST00000551845 FAM90A26D6RGX4 464 aa8.12□□□□□ -1.11
PTCH1-225ENST00000551845 IFNA10P01566 189 aa8.12□□□□□ -1.11
PTCH1-225ENST00000551845 RNASE2P10153 161 aaKnown RBP8.12□□□□□ -1.11
PTCH1-225ENST00000551845 GPR183P32249 361 aa8.12□□□□□ -1.11
PTCH1-225ENST00000551845 NPBWR1P48145 328 aa8.12□□□□□ -1.11
PTCH1-225ENST00000551845 EGFEM1PQ0D2K5 195 aa8.12□□□□□ -1.11
PTCH1-225ENST00000551845 C2orf83Q53S99 150 aa8.12□□□□□ -1.11
PTCH1-225ENST00000551845 SPSB3Q6PJ21 355 aa8.12□□□□□ -1.11
PTCH1-225ENST00000551845 DTD1Q8TEA8 209 aa8.12□□□□□ -1.11
PTCH1-225ENST00000551845 MITD1Q8WV92 249 aa8.12□□□□□ -1.11
PTCH1-225ENST00000551845 BSCL2Q96G97 398 aaPredicted RBP8.12□□□□□ -1.11
PTCH1-225ENST00000551845 RBKSQ9H477 322 aa8.12□□□□□ -1.11
PTCH1-225ENST00000551845 ZC4H2Q9NQZ6 224 aa8.12□□□□□ -1.11
PTCH1-225ENST00000551845 OR2T8A6NH00 312 aa8.11□□□□□ -1.11
PTCH1-225ENST00000551845 LGALS9O00182 355 aa8.11□□□□□ -1.11
PTCH1-225ENST00000551845 NUPL2O15504 423 aaKnown RBP8.11□□□□□ -1.11
PTCH1-225ENST00000551845 TGOLN2O43493 480 aa8.11□□□□□ -1.11
PTCH1-225ENST00000551845 GNG7O60262 68 aa8.11□□□□□ -1.11
PTCH1-225ENST00000551845 ADAP1O75689 374 aa8.11□□□□□ -1.11
PTCH1-225ENST00000551845 FCGR2BP31994 310 aaPredicted RBP8.11□□□□□ -1.11
PTCH1-225ENST00000551845 OPRK1P41145 380 aa8.11□□□□□ -1.11
PTCH1-225ENST00000551845 RPP30P78346 268 aaKnown RBP8.11□□□□□ -1.11
PTCH1-225ENST00000551845 PRR20EP86478 221 aa8.11□□□□□ -1.11
PTCH1-225ENST00000551845 PRR20CP86479 221 aa8.11□□□□□ -1.11
PTCH1-225ENST00000551845 PRR20DP86480 221 aa8.11□□□□□ -1.11
PTCH1-225ENST00000551845 PRR20BP86481 221 aa8.11□□□□□ -1.11
PTCH1-225ENST00000551845 PRR20AP86496 221 aa8.11□□□□□ -1.11
PTCH1-225ENST00000551845 BSXQ3C1V8 233 aa8.11□□□□□ -1.11
PTCH1-225ENST00000551845 PVRIGQ6DKI7 326 aa8.11□□□□□ -1.11
PTCH1-225ENST00000551845 ETFRF1Q6IPR1 90 aa8.11□□□□□ -1.11
PTCH1-225ENST00000551845 UXS1Q8NBZ7 420 aa8.11□□□□□ -1.11
PTCH1-225ENST00000551845 SLC24A4Q8NFF2 622 aa8.11□□□□□ -1.11
PTCH1-225ENST00000551845 OR52B4Q8NGK2 314 aa8.11□□□□□ -1.11
PTCH1-225ENST00000551845 ZNF431Q8TF32 576 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms