RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 CCDC190Q86UF4 302 aa14.33□□□□□ -0.12
DDX54-208ENST00000551344 SELENOHQ8IZQ5 122 aaKnown RBP14.33□□□□□ -0.12
DDX54-208ENST00000551344 SLC35G3Q8N808 338 aa14.33□□□□□ -0.12
DDX54-208ENST00000551344 CACNG8Q8WXS5 425 aa14.33□□□□□ -0.12
DDX54-208ENST00000551344 MISP3Q96FF7 219 aa14.33□□□□□ -0.12
DDX54-208ENST00000551344 GALNT14Q96FL9 552 aa14.33□□□□□ -0.12
DDX54-208ENST00000551344 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.33□□□□□ -0.12
DDX54-208ENST00000551344 TMEM56-RWDD3S4R434 201 aa14.33□□□□□ -0.12
DDX54-208ENST00000551344 V9GYH0 126 aa14.33□□□□□ -0.12
DDX54-208ENST00000551344 A0A0G2JRQ6 117 aa14.32□□□□□ -0.12
DDX54-208ENST00000551344 NDUFA4O00483 81 aa14.32□□□□□ -0.12
DDX54-208ENST00000551344 CTSGP08311 255 aa14.32□□□□□ -0.12
DDX54-208ENST00000551344 ETV6P41212 452 aa14.32□□□□□ -0.12
DDX54-208ENST00000551344 SUB1P53999 127 aaKnown RBP eCLIP14.32□□□□□ -0.12
DDX54-208ENST00000551344 KLF9Q13886 244 aaPredicted RBP14.32□□□□□ -0.12
DDX54-208ENST00000551344 AARDQ4LEZ3 155 aa14.32□□□□□ -0.12
DDX54-208ENST00000551344 Q6ZRM9 215 aa14.32□□□□□ -0.12
DDX54-208ENST00000551344 TOMM5Q8N4H5 51 aa14.32□□□□□ -0.12
DDX54-208ENST00000551344 UBAC2Q8NBM4 344 aa14.32□□□□□ -0.12
DDX54-208ENST00000551344 OR52E5Q8NH55 327 aa14.32□□□□□ -0.12
DDX54-208ENST00000551344 LHFPL5Q8TAF8 219 aa14.32□□□□□ -0.12
DDX54-208ENST00000551344 DEDD2Q8WXF8 326 aa14.32□□□□□ -0.12
DDX54-208ENST00000551344 TMEM190Q8WZ59 177 aa14.32□□□□□ -0.12
DDX54-208ENST00000551344 CHRDL1Q9BU40 450 aa14.32□□□□□ -0.12
DDX54-208ENST00000551344 TUBA4BQ9H853 241 aa14.32□□□□□ -0.12
DDX54-208ENST00000551344 NUPL2O15504 423 aaKnown RBP14.31□□□□□ -0.12
DDX54-208ENST00000551344 MT-CO2P00403 227 aa14.31□□□□□ -0.12
DDX54-208ENST00000551344 ADMP35318 185 aa14.31□□□□□ -0.12
DDX54-208ENST00000551344 SPCS3P61009 180 aa14.31□□□□□ -0.12
DDX54-208ENST00000551344 GUCA2BQ16661 112 aa14.31□□□□□ -0.12
DDX54-208ENST00000551344 SPINK9Q5DT21 86 aa14.31□□□□□ -0.12
DDX54-208ENST00000551344 PVRIGQ6DKI7 326 aa14.31□□□□□ -0.12
DDX54-208ENST00000551344 IL22RA2Q969J5 263 aa14.31□□□□□ -0.12
DDX54-208ENST00000551344 TRIM63Q969Q1 353 aa14.31□□□□□ -0.12
DDX54-208ENST00000551344 NEURL2Q9BR09 285 aa14.31□□□□□ -0.12
DDX54-208ENST00000551344 ZMAT4Q9H898 229 aa14.31□□□□□ -0.12
DDX54-208ENST00000551344 ENY2Q9NPA8 101 aa14.31□□□□□ -0.12
DDX54-208ENST00000551344 MLXQ9UH92 298 aa14.31□□□□□ -0.12
DDX54-208ENST00000551344 TRAV25A0A0B4J276 109 aa14.3□□□□□ -0.12
DDX54-208ENST00000551344 K7EMT4 169 aa14.3□□□□□ -0.12
DDX54-208ENST00000551344 CD81P60033 236 aa14.3□□□□□ -0.12
DDX54-208ENST00000551344 RELQ04864 619 aaPredicted RBP14.3□□□□□ -0.12
DDX54-208ENST00000551344 ZNF79Q15937 498 aa14.3□□□□□ -0.12
DDX54-208ENST00000551344 TMEM268Q5VZI3 342 aa14.3□□□□□ -0.12
DDX54-208ENST00000551344 TMEM230Q96A57 120 aa14.3□□□□□ -0.12
DDX54-208ENST00000551344 WDR89Q96FK6 387 aaPredicted RBP14.3□□□□□ -0.12
DDX54-208ENST00000551344 DAZ1Q9NQZ3 744 aaKnown RBP14.3□□□□□ -0.12
DDX54-208ENST00000551344 CACFD1Q9UGQ2 172 aa14.3□□□□□ -0.12
DDX54-208ENST00000551344 CORTO00230 105 aa14.29□□□□□ -0.12
DDX54-208ENST00000551344 HOXA1P49639 335 aaPredicted RBP14.29□□□□□ -0.12
DDX54-208ENST00000551344 TMEM187Q14656 261 aa14.29□□□□□ -0.12
DDX54-208ENST00000551344 ANKRD55Q3KP44 614 aa14.29□□□□□ -0.12
DDX54-208ENST00000551344 SPANXN2Q5MJ10 180 aa14.29□□□□□ -0.12
DDX54-208ENST00000551344 TMEM61Q8N0U2 210 aa14.29□□□□□ -0.12
DDX54-208ENST00000551344 PINX1Q96BK5 328 aaKnown RBP14.29□□□□□ -0.12
DDX54-208ENST00000551344 GPR146Q96CH1 333 aa14.29□□□□□ -0.12
DDX54-208ENST00000551344 TM2D3Q9BRN9 247 aa14.29□□□□□ -0.12
DDX54-208ENST00000551344 C15orf62A8K5M9 175 aa14.28□□□□□ -0.12
DDX54-208ENST00000551344 CD7P09564 240 aa14.28□□□□□ -0.12
DDX54-208ENST00000551344 RNASE2P10153 161 aaKnown RBP14.28□□□□□ -0.12
DDX54-208ENST00000551344 AKR1C4P17516 323 aa14.28□□□□□ -0.12
DDX54-208ENST00000551344 NPBWR1P48145 328 aa14.28□□□□□ -0.12
DDX54-208ENST00000551344 BTNL8Q6UX41 500 aa14.28□□□□□ -0.12
DDX54-208ENST00000551344 RBPMS2Q6ZRY4 209 aaKnown RBP14.28□□□□□ -0.12
DDX54-208ENST00000551344 SLC16A13Q7RTY0 426 aa14.28□□□□□ -0.12
DDX54-208ENST00000551344 DUSP18Q8NEJ0 188 aa14.28□□□□□ -0.12
DDX54-208ENST00000551344 RCHY1Q96PM5 261 aa14.28□□□□□ -0.12
DDX54-208ENST00000551344 CACNG5Q9UF02 275 aa14.28□□□□□ -0.12
DDX54-208ENST00000551344 PIGBOS1A0A0B4J2F0 54 aa14.27□□□□□ -0.13
DDX54-208ENST00000551344 GNG7O60262 68 aa14.27□□□□□ -0.13
DDX54-208ENST00000551344 ANXA3P12429 323 aa14.27□□□□□ -0.13
DDX54-208ENST00000551344 SLC25A21Q9BQT8 299 aaPredicted RBP14.27□□□□□ -0.13
DDX54-208ENST00000551344 C20orf24Q9BUV8 137 aa14.27□□□□□ -0.13
DDX54-208ENST00000551344 NDUFA13Q9P0J0 144 aa14.27□□□□□ -0.13
DDX54-208ENST00000551344 A0A0B4J2A0 478 aa14.26□□□□□ -0.13
DDX54-208ENST00000551344 OR11H12B2RN74 326 aa14.26□□□□□ -0.13
DDX54-208ENST00000551344 IGHV3-48P01763 117 aa14.26□□□□□ -0.13
DDX54-208ENST00000551344 SUPT4H1P63272 117 aaKnown RBP14.26□□□□□ -0.13
DDX54-208ENST00000551344 SRPXP78539 464 aa14.26□□□□□ -0.13
DDX54-208ENST00000551344 BSXQ3C1V8 233 aa14.26□□□□□ -0.13
DDX54-208ENST00000551344 TMEM128Q5BJH2 165 aa14.26□□□□□ -0.13
DDX54-208ENST00000551344 LAMTOR1Q6IAA8 161 aa14.26□□□□□ -0.13
DDX54-208ENST00000551344 SHPKQ9UHJ6 478 aa14.26□□□□□ -0.13
DDX54-208ENST00000551344 SCAF4O95104 1147 aaKnown RBP14.25□□□□□ -0.13
DDX54-208ENST00000551344 SULT1A3P0DMM9 295 aa14.25□□□□□ -0.13
DDX54-208ENST00000551344 SULT1A4P0DMN0 295 aa14.25□□□□□ -0.13
DDX54-208ENST00000551344 HTR2BP41595 481 aa14.25□□□□□ -0.13
DDX54-208ENST00000551344 HAGHQ16775 308 aa14.25□□□□□ -0.13
DDX54-208ENST00000551344 LINC00322Q6ZN03 302 aaPredicted RBP14.25□□□□□ -0.13
DDX54-208ENST00000551344 LGI3Q8N145 548 aa14.25□□□□□ -0.13
DDX54-208ENST00000551344 OR52B4Q8NGK2 314 aa14.25□□□□□ -0.13
DDX54-208ENST00000551344 OR10C1Q96KK4 312 aa14.25□□□□□ -0.13
DDX54-208ENST00000551344 SRRQ9GZT4 340 aa14.25□□□□□ -0.13
DDX54-208ENST00000551344 HEYLQ9NQ87 328 aaPredicted RBP14.25□□□□□ -0.13
DDX54-208ENST00000551344 SELENOKQ9Y6D0 94 aa14.25□□□□□ -0.13
DDX54-208ENST00000551344 TENM3Q9P273 2699 aa14.24□□□□□ -0.13
DDX54-208ENST00000551344 STAB2Q8WWQ8 2551 aa14.24□□□□□ -0.13
DDX54-208ENST00000551344 YIF1AO95070 293 aa14.24□□□□□ -0.13
DDX54-208ENST00000551344 TMEM50AO95807 157 aa14.24□□□□□ -0.13
DDX54-208ENST00000551344 CCR6P51684 374 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms