RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 LIMS3P0CW19 117 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 LIMS4P0CW20 117 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 CD37P11049 281 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 MGMTP16455 207 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 CEACAM6P40199 344 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 BCAP31P51572 246 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 GBX2P52951 348 aaPredicted RBP2.57□□□□□ -2
LIMA1-206ENST00000550611 RHOGP84095 191 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 ATP5G2Q06055 141 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 MEDAGQ5VYS4 303 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 ZNF57Q68EA5 555 aaPredicted RBP2.57□□□□□ -2
LIMA1-206ENST00000550611 FAM223AQ8IWN6 122 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 MMD2Q8IY49 270 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 TTC9CQ8N5M4 171 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 GVQW1Q8N7I0 195 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 UXS1Q8NBZ7 420 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 RHOXF1Q8NHV9 184 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 LHFPL5Q8TAF8 219 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 DYNLRB2Q8TF09 96 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 TSEN15Q8WW01 171 aaKnown RBP2.57□□□□□ -2
LIMA1-206ENST00000550611 PYDC1Q8WXC3 89 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 DGCR14Q96DF8 476 aaKnown RBP2.57□□□□□ -2
LIMA1-206ENST00000550611 MRPL48Q96GC5 212 aaKnown RBP2.57□□□□□ -2
LIMA1-206ENST00000550611 S100A13Q99584 98 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 ZNF184Q99676 751 aaPredicted RBP2.57□□□□□ -2
LIMA1-206ENST00000550611 SPXQ9BT56 116 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 FAAP24Q9BTP7 215 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 SELENOIQ9C0D9 397 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 BANF2Q9H503 90 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 FGF20Q9NP95 211 aaPredicted RBP2.57□□□□□ -2
LIMA1-206ENST00000550611 TREM1Q9NP99 234 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 AGRNO00468 2067 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 LRP1Q07954 4544 aaKnown RBP2.56□□□□□ -2
LIMA1-206ENST00000550611 A0A1W2PPK0 400 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 FOXI3A8MTJ6 420 aaPredicted RBP2.56□□□□□ -2
LIMA1-206ENST00000550611 FAM25AB3EWG3 89 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 FAM25CB3EWG5 89 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 FAM25GB3EWG6 89 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 PPP5D1E7EU14 171 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 DHFRP00374 187 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 LALBAP00709 142 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 APOA1P02647 267 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 PRSS1P07477 247 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 SCTP09683 121 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 STAG3L3P0CL85 134 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 SPP1P10451 314 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 HTR2CP28335 458 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 AP2S1P53680 142 aaPredicted RBP2.56□□□□□ -2
LIMA1-206ENST00000550611 APOC4P55056 127 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 UBE2KP61086 200 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 PPP3R1P63098 170 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 QRFPP83859 136 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 EXOSC2Q13868 293 aaKnown RBP2.56□□□□□ -2
LIMA1-206ENST00000550611 PRSS8Q16651 343 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 DEFB135Q30KP9 77 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 ANKRD55Q3KP44 614 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 NRARPQ7Z6K4 114 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 NFE4Q86UQ8 179 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 STPG4Q8N801 248 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.56□□□□□ -2
LIMA1-206ENST00000550611 NECAP1Q8NC96 275 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 OR52B4Q8NGK2 314 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 OR52I1Q8NGK6 324 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 OR13C5Q8NGS8 318 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 RNASE11Q8TAA1 199 aaKnown RBP2.56□□□□□ -2
LIMA1-206ENST00000550611 OCC1Q8TAD7 63 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 IL1F10Q8WWZ1 152 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 CACNG8Q8WXS5 425 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 THRSPQ92748 146 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 SMIM19Q96E16 107 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 C5orf30Q96GV9 206 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 PGLYRP3Q96LB9 341 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 C18orf15Q96N68 181 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 TM2D1Q9BX74 207 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 C11orf68Q9H3H3 251 aaKnown RBP2.56□□□□□ -2
LIMA1-206ENST00000550611 SAV1Q9H4B6 383 aaPredicted RBP2.56□□□□□ -2
LIMA1-206ENST00000550611 AMBNQ9NP70 447 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 SLC35D1Q9NTN3 355 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 IMPAD1Q9NX62 359 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 BABAM2Q9NXR7 383 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 COA4Q9NYJ1 87 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 ABRACLQ9P1F3 81 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 OR1A1Q9P1Q5 309 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 GHRLQ9UBU3 117 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 ZNF221Q9UK13 617 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 AP4S1Q9Y587 144 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 SELENOKQ9Y6D0 94 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 LRP2P98164 4655 aa2.56□□□□□ -2
LIMA1-206ENST00000550611 A0A0A6YYD4 124 aa2.55□□□□□ -2
LIMA1-206ENST00000550611 IGLV9-49A0A0B4J1Y8 123 aa2.55□□□□□ -2
LIMA1-206ENST00000550611 A0A1B0GW64 132 aa2.55□□□□□ -2
LIMA1-206ENST00000550611 ZNF98A6NK75 572 aa2.55□□□□□ -2
LIMA1-206ENST00000550611 TMEM14DPA8MWL7 114 aa2.55□□□□□ -2
LIMA1-206ENST00000550611 E7EUB6 86 aa2.55□□□□□ -2
LIMA1-206ENST00000550611 F8W036 122 aa2.55□□□□□ -2
LIMA1-206ENST00000550611 M0R1X1 148 aa2.55□□□□□ -2
LIMA1-206ENST00000550611 PRAF2O60831 178 aa2.55□□□□□ -2
LIMA1-206ENST00000550611 FCGR3BO75015 233 aa2.55□□□□□ -2
LIMA1-206ENST00000550611 CDK2AP2O75956 126 aa2.55□□□□□ -2
LIMA1-206ENST00000550611 OR2J3O76001 311 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms