RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 ACP7Q6ZNF0 438 aa13.26□□□□□ -0.29
RBFOX1-212ENST00000550418 FLVCR1-AS1Q8TAF5 88 aa13.26□□□□□ -0.29
RBFOX1-212ENST00000550418 PRR33A8MZF0 331 aa13.26□□□□□ -0.29
RBFOX1-212ENST00000550418 SPSB3Q6PJ21 355 aa13.26□□□□□ -0.29
RBFOX1-212ENST00000550418 ORMDL3Q8N138 153 aa13.26□□□□□ -0.29
RBFOX1-212ENST00000550418 FMC1Q96HJ9 113 aa13.26□□□□□ -0.29
RBFOX1-212ENST00000550418 RAMP3O60896 148 aa13.25□□□□□ -0.29
RBFOX1-212ENST00000550418 EFNB3Q15768 340 aa13.25□□□□□ -0.29
RBFOX1-212ENST00000550418 Q6AWC8 147 aa13.25□□□□□ -0.29
RBFOX1-212ENST00000550418 CCDC144NLQ6NUI1 221 aa13.25□□□□□ -0.29
RBFOX1-212ENST00000550418 WBP1Q96G27 269 aa13.25□□□□□ -0.29
RBFOX1-212ENST00000550418 TRAV30A0A087WSZ9 112 aa13.25□□□□□ -0.29
RBFOX1-212ENST00000550418 MFAP4P55083 255 aa13.25□□□□□ -0.29
RBFOX1-212ENST00000550418 RTN4RL2Q86UN3 420 aa13.25□□□□□ -0.29
RBFOX1-212ENST00000550418 OSR1Q8TAX0 266 aaPredicted RBP13.25□□□□□ -0.29
RBFOX1-212ENST00000550418 RNASEH2CQ8TDP1 164 aaKnown RBP13.25□□□□□ -0.29
RBFOX1-212ENST00000550418 CGB1A6NKQ9 187 aa13.25□□□□□ -0.29
RBFOX1-212ENST00000550418 TMEM186Q96B77 213 aa13.25□□□□□ -0.29
RBFOX1-212ENST00000550418 NHP2Q9NX24 153 aaKnown RBP13.25□□□□□ -0.29
RBFOX1-212ENST00000550418 TIAF1O95411 115 aa13.25□□□□□ -0.29
RBFOX1-212ENST00000550418 STAG3L3P0CL85 134 aa13.25□□□□□ -0.29
RBFOX1-212ENST00000550418 ADIPOQQ15848 244 aa13.25□□□□□ -0.29
RBFOX1-212ENST00000550418 FOXC2Q99958 501 aa13.25□□□□□ -0.29
RBFOX1-212ENST00000550418 ZNF703Q9H7S9 590 aaPredicted RBP13.25□□□□□ -0.29
RBFOX1-212ENST00000550418 CACNA1BQ00975 2339 aa13.25□□□□□ -0.29
RBFOX1-212ENST00000550418 F2RL2O00254 374 aa13.24□□□□□ -0.29
RBFOX1-212ENST00000550418 C3orf79P0CE67 100 aa13.24□□□□□ -0.29
RBFOX1-212ENST00000550418 HES7Q9BYE0 225 aa13.24□□□□□ -0.29
RBFOX1-212ENST00000550418 PHLDA3Q9Y5J5 127 aa13.24□□□□□ -0.29
RBFOX1-212ENST00000550418 FAM169BQ8N8A8 192 aa13.24□□□□□ -0.29
RBFOX1-212ENST00000550418 SMAGPQ0VAQ4 97 aa13.24□□□□□ -0.29
RBFOX1-212ENST00000550418 ARTNQ5T4W7 220 aa13.24□□□□□ -0.29
RBFOX1-212ENST00000550418 WFDC3Q8IUB2 231 aa13.24□□□□□ -0.29
RBFOX1-212ENST00000550418 DIRC2Q96SL1 478 aa13.24□□□□□ -0.29
RBFOX1-212ENST00000550418 ROS1P08922 2347 aa13.24□□□□□ -0.29
RBFOX1-212ENST00000550418 HTN1P15515 57 aa13.24□□□□□ -0.29
RBFOX1-212ENST00000550418 NUDT10Q8NFP7 164 aa13.24□□□□□ -0.29
RBFOX1-212ENST00000550418 TRAV24A0A0B4J272 114 aa13.23□□□□□ -0.29
RBFOX1-212ENST00000550418 C16orf97H3BN30 126 aa13.23□□□□□ -0.29
RBFOX1-212ENST00000550418 RFPL3SP0C7P2 107 aa13.23□□□□□ -0.29
RBFOX1-212ENST00000550418 TSPOP30536 169 aa13.23□□□□□ -0.29
RBFOX1-212ENST00000550418 TIMM23BQ5SRD1 257 aa13.23□□□□□ -0.29
RBFOX1-212ENST00000550418 LCN12Q6JVE5 192 aa13.23□□□□□ -0.29
RBFOX1-212ENST00000550418 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.23□□□□□ -0.29
RBFOX1-212ENST00000550418 CHCHD1Q96BP2 118 aaKnown RBP13.23□□□□□ -0.29
RBFOX1-212ENST00000550418 C20orf144Q9BQM9 153 aa13.23□□□□□ -0.29
RBFOX1-212ENST00000550418 DCTN5Q9BTE1 182 aa13.23□□□□□ -0.29
RBFOX1-212ENST00000550418 MS4A6AQ9H2W1 248 aa13.23□□□□□ -0.29
RBFOX1-212ENST00000550418 RABAC1Q9UI14 185 aa13.23□□□□□ -0.29
RBFOX1-212ENST00000550418 RAXQ9Y2V3 346 aa13.23□□□□□ -0.29
RBFOX1-212ENST00000550418 KLF2Q9Y5W3 355 aaPredicted RBP13.23□□□□□ -0.29
RBFOX1-212ENST00000550418 CSRP2Q16527 193 aa13.23□□□□□ -0.29
RBFOX1-212ENST00000550418 RNF144BQ7Z419 303 aa13.23□□□□□ -0.29
RBFOX1-212ENST00000550418 FADS6Q8N9I5 356 aa13.23□□□□□ -0.29
RBFOX1-212ENST00000550418 OR9G1Q8NH87 305 aa13.23□□□□□ -0.29
RBFOX1-212ENST00000550418 PRR7Q8TB68 274 aa13.23□□□□□ -0.29
RBFOX1-212ENST00000550418 C16orf92Q96LL3 132 aa13.23□□□□□ -0.29
RBFOX1-212ENST00000550418 CRXO43186 299 aaPredicted RBP13.23□□□□□ -0.29
RBFOX1-212ENST00000550418 ZNF441Q8N8Z8 693 aa13.23□□□□□ -0.29
RBFOX1-212ENST00000550418 OR10J6PQ8NGY7 276 aa13.23□□□□□ -0.29
RBFOX1-212ENST00000550418 BEX4Q9NWD9 120 aaPredicted RBP13.23□□□□□ -0.29
RBFOX1-212ENST00000550418 POLR3KQ9Y2Y1 108 aaPredicted RBP13.23□□□□□ -0.29
RBFOX1-212ENST00000550418 CFPP27918 469 aa13.22□□□□□ -0.29
RBFOX1-212ENST00000550418 MPV17L2Q567V2 206 aa13.22□□□□□ -0.29
RBFOX1-212ENST00000550418 CIARTQ8N365 385 aaPredicted RBP13.22□□□□□ -0.29
RBFOX1-212ENST00000550418 POLEQ07864 2286 aa13.22□□□□□ -0.29
RBFOX1-212ENST00000550418 FAM181BA6NEQ2 426 aa13.22□□□□□ -0.29
RBFOX1-212ENST00000550418 DLX6P56179 175 aa13.22□□□□□ -0.29
RBFOX1-212ENST00000550418 MUC21A0A0G2JKD1 596 aa13.22□□□□□ -0.29
RBFOX1-212ENST00000550418 MUC21A0A140T8X8 626 aa13.22□□□□□ -0.29
RBFOX1-212ENST00000550418 A0A1W2PQM1 296 aa13.22□□□□□ -0.29
RBFOX1-212ENST00000550418 GPX1P07203 203 aa13.22□□□□□ -0.29
RBFOX1-212ENST00000550418 MEF2CQ06413 473 aaPredicted RBP13.22□□□□□ -0.29
RBFOX1-212ENST00000550418 MUC21Q5SSG8 566 aa13.22□□□□□ -0.29
RBFOX1-212ENST00000550418 VCX2Q9H322 139 aa13.22□□□□□ -0.29
RBFOX1-212ENST00000550418 IGHV1-69-2A0A0G2JMI3 117 aa13.21□□□□□ -0.29
RBFOX1-212ENST00000550418 C9JCJ5 164 aa13.21□□□□□ -0.29
RBFOX1-212ENST00000550418 SRSF7Q16629 238 aaKnown RBP eCLIP13.21□□□□□ -0.29
RBFOX1-212ENST00000550418 TMEM14EPQ6UXP3 125 aa13.21□□□□□ -0.29
RBFOX1-212ENST00000550418 TSKUQ8WUA8 353 aa13.21□□□□□ -0.29
RBFOX1-212ENST00000550418 HSD52Q0P140 79 aa13.21□□□□□ -0.29
RBFOX1-212ENST00000550418 TPTE2P1Q5T6R2 138 aa13.21□□□□□ -0.29
RBFOX1-212ENST00000550418 TREML4Q6UXN2 200 aa13.21□□□□□ -0.29
RBFOX1-212ENST00000550418 ZNF497Q6ZNH5 498 aa13.21□□□□□ -0.29
RBFOX1-212ENST00000550418 CRIM1Q9NZV1 1036 aa13.21□□□□□ -0.29
RBFOX1-212ENST00000550418 FAM90A27PA6NNH2 459 aa13.21□□□□□ -0.29
RBFOX1-212ENST00000550418 PFN1P07737 140 aaKnown RBP13.21□□□□□ -0.29
RBFOX1-212ENST00000550418 SCGB1A1P11684 91 aa13.21□□□□□ -0.29
RBFOX1-212ENST00000550418 FAM53AQ6NSI3 398 aaPredicted RBP13.21□□□□□ -0.29
RBFOX1-212ENST00000550418 WDR82Q6UXN9 313 aa13.21□□□□□ -0.29
RBFOX1-212ENST00000550418 TMPRSS3P57727 454 aa13.21□□□□□ -0.3
RBFOX1-212ENST00000550418 GNG5P63218 68 aa13.21□□□□□ -0.3
RBFOX1-212ENST00000550418 Q9H3A6 140 aa13.21□□□□□ -0.3
RBFOX1-212ENST00000550418 THSD7BQ9C0I4 1608 aa13.21□□□□□ -0.3
RBFOX1-212ENST00000550418 A0A1W2PR77 199 aa13.2□□□□□ -0.3
RBFOX1-212ENST00000550418 APOMO95445 188 aa13.2□□□□□ -0.3
RBFOX1-212ENST00000550418 METTL26Q96S19 204 aa13.2□□□□□ -0.3
RBFOX1-212ENST00000550418 GGTLC1Q9BX51 225 aa13.2□□□□□ -0.3
RBFOX1-212ENST00000550418 SPTBN1Q01082 2364 aaKnown RBP13.2□□□□□ -0.3
RBFOX1-212ENST00000550418 CDCP2Q5VXM1 449 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms