RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 LYSMD2Q8IV50 215 aa8.39□□□□□ -1.07
SMARCD1-208ENST00000550280 ZNF114Q8NC26 417 aa8.39□□□□□ -1.07
SMARCD1-208ENST00000550280 MISP3Q96FF7 219 aa8.39□□□□□ -1.07
SMARCD1-208ENST00000550280 C6orf62Q9GZU0 229 aaPredicted RBP8.39□□□□□ -1.07
SMARCD1-208ENST00000550280 MS4A6AQ9H2W1 248 aa8.39□□□□□ -1.07
SMARCD1-208ENST00000550280 MRPL36Q9P0J6 103 aaKnown RBP8.39□□□□□ -1.07
SMARCD1-208ENST00000550280 PRNDQ9UKY0 176 aa8.39□□□□□ -1.07
SMARCD1-208ENST00000550280 X6R8D5 127 aa8.39□□□□□ -1.07
SMARCD1-208ENST00000550280 HSPG2P98160 4391 aa8.38□□□□□ -1.07
SMARCD1-208ENST00000550280 ELOA3CA0A087WX78 387 aaPredicted RBP8.38□□□□□ -1.07
SMARCD1-208ENST00000550280 IGHV4-28A0A0C4DH34 117 aa8.38□□□□□ -1.07
SMARCD1-208ENST00000550280 XRCC3O43542 346 aa8.38□□□□□ -1.07
SMARCD1-208ENST00000550280 IFNA4P05014 189 aa8.38□□□□□ -1.07
SMARCD1-208ENST00000550280 CBX5P45973 191 aa8.38□□□□□ -1.07
SMARCD1-208ENST00000550280 HSPA13P48723 471 aa8.38□□□□□ -1.07
SMARCD1-208ENST00000550280 TMEM187Q14656 261 aa8.38□□□□□ -1.07
SMARCD1-208ENST00000550280 IZUMO4Q1ZYL8 232 aa8.38□□□□□ -1.07
SMARCD1-208ENST00000550280 Q6ZTC4 211 aa8.38□□□□□ -1.07
SMARCD1-208ENST00000550280 TMEM56Q96MV1 263 aa8.38□□□□□ -1.07
SMARCD1-208ENST00000550280 TXN2Q99757 166 aa8.38□□□□□ -1.07
SMARCD1-208ENST00000550280 SCRT1Q9BWW7 348 aa8.38□□□□□ -1.07
SMARCD1-208ENST00000550280 RAB26Q9ULW5 256 aa8.38□□□□□ -1.07
SMARCD1-208ENST00000550280 LOC100506127A0A0U1RQW1 187 aa8.37□□□□□ -1.07
SMARCD1-208ENST00000550280 GPR31O00270 319 aa8.37□□□□□ -1.07
SMARCD1-208ENST00000550280 SNAPC5O75971 98 aa8.37□□□□□ -1.07
SMARCD1-208ENST00000550280 CMC4P56277 68 aaPredicted RBP8.37□□□□□ -1.07
SMARCD1-208ENST00000550280 TCTAP57738 103 aa8.37□□□□□ -1.07
SMARCD1-208ENST00000550280 TAS2R20P59543 309 aa8.37□□□□□ -1.07
SMARCD1-208ENST00000550280 PRCDQ00LT1 54 aa8.37□□□□□ -1.07
SMARCD1-208ENST00000550280 PHLDA2Q53GA4 152 aa8.37□□□□□ -1.07
SMARCD1-208ENST00000550280 SPINK9Q5DT21 86 aa8.37□□□□□ -1.07
SMARCD1-208ENST00000550280 PVRIGQ6DKI7 326 aa8.37□□□□□ -1.07
SMARCD1-208ENST00000550280 TRPT1Q86TN4 253 aaKnown RBP8.37□□□□□ -1.07
SMARCD1-208ENST00000550280 FCGR1BQ92637 280 aa8.37□□□□□ -1.07
SMARCD1-208ENST00000550280 PINX1Q96BK5 328 aaKnown RBP8.37□□□□□ -1.07
SMARCD1-208ENST00000550280 HRH4Q9H3N8 390 aa8.37□□□□□ -1.07
SMARCD1-208ENST00000550280 DIABLOQ9NR28 239 aa8.37□□□□□ -1.07
SMARCD1-208ENST00000550280 CELA1Q9UNI1 258 aa8.37□□□□□ -1.07
SMARCD1-208ENST00000550280 ZNF705EA8MWA4 302 aaPredicted RBP8.36□□□□□ -1.07
SMARCD1-208ENST00000550280 ST8SIA3O43173 380 aa8.36□□□□□ -1.07
SMARCD1-208ENST00000550280 HLA-DMBP28068 263 aa8.36□□□□□ -1.07
SMARCD1-208ENST00000550280 HRH1P35367 487 aa8.36□□□□□ -1.07
SMARCD1-208ENST00000550280 TBC1D26Q86UD7 250 aa8.36□□□□□ -1.07
SMARCD1-208ENST00000550280 CSNK1G2-AS1Q8NCQ2 148 aa8.36□□□□□ -1.07
SMARCD1-208ENST00000550280 MRGPRFQ96AM1 343 aa8.36□□□□□ -1.07
SMARCD1-208ENST00000550280 IFT46Q9NQC8 304 aa8.36□□□□□ -1.07
SMARCD1-208ENST00000550280 FKBP11Q9NYL4 201 aa8.36□□□□□ -1.07
SMARCD1-208ENST00000550280 PUS1Q9Y606 427 aaKnown RBP eCLIP8.36□□□□□ -1.07
SMARCD1-208ENST00000550280 AGRNO00468 2067 aa8.35□□□□□ -1.07
SMARCD1-208ENST00000550280 IGHV4-4A0A075B6R2 117 aa8.35□□□□□ -1.07
SMARCD1-208ENST00000550280 TRAV2A0A0B4J234 112 aa8.35□□□□□ -1.07
SMARCD1-208ENST00000550280 KNCNA6PVL3 124 aa8.35□□□□□ -1.07
SMARCD1-208ENST00000550280 K7EQG2 157 aa8.35□□□□□ -1.07
SMARCD1-208ENST00000550280 RTL8CO15255 209 aa8.35□□□□□ -1.07
SMARCD1-208ENST00000550280 GNG7O60262 68 aa8.35□□□□□ -1.07
SMARCD1-208ENST00000550280 TMEM50AO95807 157 aa8.35□□□□□ -1.07
SMARCD1-208ENST00000550280 P0C879 139 aa8.35□□□□□ -1.07
SMARCD1-208ENST00000550280 HSPE1P61604 102 aaKnown RBP8.35□□□□□ -1.07
SMARCD1-208ENST00000550280 MLANAQ16655 118 aa8.35□□□□□ -1.07
SMARCD1-208ENST00000550280 OR5H2Q8NGV7 314 aa8.35□□□□□ -1.07
SMARCD1-208ENST00000550280 BORCS5Q969J3 196 aa8.35□□□□□ -1.07
SMARCD1-208ENST00000550280 TSC22D3Q99576 134 aa8.35□□□□□ -1.07
SMARCD1-208ENST00000550280 FNDC4Q9H6D8 234 aaPredicted RBP8.35□□□□□ -1.07
SMARCD1-208ENST00000550280 FAM212BQ9NTI7 297 aaPredicted RBP8.35□□□□□ -1.07
SMARCD1-208ENST00000550280 C11orf94C9JXX5 98 aa8.34□□□□□ -1.07
SMARCD1-208ENST00000550280 IGKV1-5P01602 117 aa8.34□□□□□ -1.07
SMARCD1-208ENST00000550280 HLA-DMAP28067 261 aa8.34□□□□□ -1.07
SMARCD1-208ENST00000550280 PPP5CP53041 499 aa8.34□□□□□ -1.07
SMARCD1-208ENST00000550280 ZNF600Q6ZNG1 722 aa8.34□□□□□ -1.07
SMARCD1-208ENST00000550280 ZNF767PQ75MW2 155 aa8.34□□□□□ -1.07
SMARCD1-208ENST00000550280 CMTM1Q8IZ96 169 aa8.34□□□□□ -1.07
SMARCD1-208ENST00000550280 OR6F1Q8NGZ6 308 aa8.34□□□□□ -1.07
SMARCD1-208ENST00000550280 GPX8Q8TED1 209 aa8.34□□□□□ -1.07
SMARCD1-208ENST00000550280 DCANP1Q8TF63 244 aa8.34□□□□□ -1.07
SMARCD1-208ENST00000550280 CMTM3Q96MX0 182 aa8.34□□□□□ -1.07
SMARCD1-208ENST00000550280 GINS3Q9BRX5 216 aa8.34□□□□□ -1.07
SMARCD1-208ENST00000550280 KRTAP4-5Q9BYR2 181 aa8.34□□□□□ -1.07
SMARCD1-208ENST00000550280 VCX3BQ9H321 246 aa8.34□□□□□ -1.07
SMARCD1-208ENST00000550280 CLEC5AQ9NY25 188 aa8.34□□□□□ -1.07
SMARCD1-208ENST00000550280 A0A0B4J293 547 aa8.33□□□□□ -1.08
SMARCD1-208ENST00000550280 DNASE2O00115 360 aaPredicted RBP8.33□□□□□ -1.08
SMARCD1-208ENST00000550280 EIF4EP06730 217 aaKnown RBP8.33□□□□□ -1.08
SMARCD1-208ENST00000550280 ZNF688P0C7X2 276 aa8.33□□□□□ -1.08
SMARCD1-208ENST00000550280 RNASE2P10153 161 aaKnown RBP8.33□□□□□ -1.08
SMARCD1-208ENST00000550280 RPS19P39019 145 aaKnown RBP8.33□□□□□ -1.08
SMARCD1-208ENST00000550280 TAS2R46P59540 309 aa8.33□□□□□ -1.08
SMARCD1-208ENST00000550280 PAFAH1B2P68402 229 aa8.33□□□□□ -1.08
SMARCD1-208ENST00000550280 C12orf74Q32Q52 190 aa8.33□□□□□ -1.08
SMARCD1-208ENST00000550280 UBE2NLQ5JXB2 153 aa8.33□□□□□ -1.08
SMARCD1-208ENST00000550280 TMEM69Q5SWH9 247 aa8.33□□□□□ -1.08
SMARCD1-208ENST00000550280 H2BFWTQ7Z2G1 175 aa8.33□□□□□ -1.08
SMARCD1-208ENST00000550280 STHQ8IWL8 128 aa8.33□□□□□ -1.08
SMARCD1-208ENST00000550280 SAMD12Q8N8I0 201 aa8.33□□□□□ -1.08
SMARCD1-208ENST00000550280 TSPAN14Q8NG11 270 aa8.33□□□□□ -1.08
SMARCD1-208ENST00000550280 OR4A16Q8NH70 328 aa8.33□□□□□ -1.08
SMARCD1-208ENST00000550280 S100A16Q96FQ6 103 aaKnown RBP8.33□□□□□ -1.08
SMARCD1-208ENST00000550280 RABAC1Q9UI14 185 aa8.33□□□□□ -1.08
SMARCD1-208ENST00000550280 LRP1BQ9NZR2 4599 aa8.33□□□□□ -1.08
SMARCD1-208ENST00000550280 TRAV10A0A0B4J240 114 aa8.32□□□□□ -1.08
SMARCD1-208ENST00000550280 A0A0G2JRQ6 117 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms