RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 SPCS3P61009 180 aa10.3□□□□□ -0.76
NUP188-211ENST00000550219 PRCDQ00LT1 54 aa10.3□□□□□ -0.76
NUP188-211ENST00000550219 DEFA5Q01523 94 aa10.3□□□□□ -0.76
NUP188-211ENST00000550219 ID3Q02535 119 aa10.3□□□□□ -0.76
NUP188-211ENST00000550219 TNFRSF9Q07011 255 aa10.3□□□□□ -0.76
NUP188-211ENST00000550219 ACSM6Q6P461 480 aa10.3□□□□□ -0.76
NUP188-211ENST00000550219 OR1S1Q8NH92 325 aa10.3□□□□□ -0.76
NUP188-211ENST00000550219 CHAC2Q8WUX2 184 aa10.3□□□□□ -0.76
NUP188-211ENST00000550219 FYTTD1Q96QD9 318 aaKnown RBP10.3□□□□□ -0.76
NUP188-211ENST00000550219 A0A1B0GVG6 124 aa10.29□□□□□ -0.76
NUP188-211ENST00000550219 HMX3A6NHT5 357 aa10.29□□□□□ -0.76
NUP188-211ENST00000550219 MSGN1A6NI15 193 aa10.29□□□□□ -0.76
NUP188-211ENST00000550219 FAM25EA8MYX2 175 aa10.29□□□□□ -0.76
NUP188-211ENST00000550219 TRAPPC2P0DI81 140 aa10.29□□□□□ -0.76
NUP188-211ENST00000550219 TRAPPC2BP0DI82 140 aa10.29□□□□□ -0.76
NUP188-211ENST00000550219 CYCSP99999 105 aaKnown RBP10.29□□□□□ -0.76
NUP188-211ENST00000550219 AKIRIN2Q53H80 203 aa10.29□□□□□ -0.76
NUP188-211ENST00000550219 TMEM68Q96MH6 324 aa10.29□□□□□ -0.76
NUP188-211ENST00000550219 NMES1Q9C002 83 aa10.29□□□□□ -0.76
NUP188-211ENST00000550219 SLA2Q9H6Q3 261 aa10.29□□□□□ -0.76
NUP188-211ENST00000550219 IGLC7A0M8Q6 106 aa10.28□□□□□ -0.76
NUP188-211ENST00000550219 ANKRD34BA5PLL1 514 aa10.28□□□□□ -0.76
NUP188-211ENST00000550219 C3orf84H3BNL1 204 aa10.28□□□□□ -0.76
NUP188-211ENST00000550219 IFNA17P01571 189 aa10.28□□□□□ -0.76
NUP188-211ENST00000550219 NKX2-1P43699 371 aaPredicted RBP10.28□□□□□ -0.76
NUP188-211ENST00000550219 HSD17B13Q7Z5P4 300 aaPredicted RBP10.28□□□□□ -0.76
NUP188-211ENST00000550219 OR5T1Q8NG75 326 aa10.28□□□□□ -0.76
NUP188-211ENST00000550219 ASB13Q8WXK3 278 aa10.28□□□□□ -0.76
NUP188-211ENST00000550219 PDCD10Q9BUL8 212 aa10.28□□□□□ -0.76
NUP188-211ENST00000550219 ELOVL1Q9BW60 279 aa10.28□□□□□ -0.76
NUP188-211ENST00000550219 GSKIPQ9P0R6 139 aa10.28□□□□□ -0.76
NUP188-211ENST00000550219 MBPP02686 304 aaPredicted RBP10.27□□□□□ -0.77
NUP188-211ENST00000550219 CRYGCP07315 174 aa10.27□□□□□ -0.77
NUP188-211ENST00000550219 APELAP0DMC3 54 aa10.27□□□□□ -0.77
NUP188-211ENST00000550219 WT1-ASQ06250 92 aa10.27□□□□□ -0.77
NUP188-211ENST00000550219 TTC9CQ8N5M4 171 aa10.27□□□□□ -0.77
NUP188-211ENST00000550219 OR10W1Q8NGF6 305 aa10.27□□□□□ -0.77
NUP188-211ENST00000550219 MUC7Q8TAX7 377 aa10.27□□□□□ -0.77
NUP188-211ENST00000550219 WDR89Q96FK6 387 aaPredicted RBP10.27□□□□□ -0.77
NUP188-211ENST00000550219 ZNF436Q9C0F3 470 aaPredicted RBP10.27□□□□□ -0.77
NUP188-211ENST00000550219 RBKSQ9H477 322 aa10.27□□□□□ -0.77
NUP188-211ENST00000550219 PLEKHA3Q9HB20 300 aa10.27□□□□□ -0.77
NUP188-211ENST00000550219 NPIPB5A8MRT5 1133 aa10.26□□□□□ -0.77
NUP188-211ENST00000550219 SYNGR2O43760 224 aa10.26□□□□□ -0.77
NUP188-211ENST00000550219 MED6O75586 246 aa10.26□□□□□ -0.77
NUP188-211ENST00000550219 GIPP09681 153 aaPredicted RBP10.26□□□□□ -0.77
NUP188-211ENST00000550219 CTRB1P17538 263 aa10.26□□□□□ -0.77
NUP188-211ENST00000550219 KLK9Q2XQG4 91 aa10.26□□□□□ -0.77
NUP188-211ENST00000550219 SPINK9Q5DT21 86 aa10.26□□□□□ -0.77
NUP188-211ENST00000550219 CTRB2Q6GPI1 263 aa10.26□□□□□ -0.77
NUP188-211ENST00000550219 OR2C3Q8N628 320 aa10.26□□□□□ -0.77
NUP188-211ENST00000550219 HINT2Q9BX68 163 aa10.26□□□□□ -0.77
NUP188-211ENST00000550219 C11orf1Q9H5F2 150 aa10.26□□□□□ -0.77
NUP188-211ENST00000550219 ZMAT4Q9H898 229 aa10.26□□□□□ -0.77
NUP188-211ENST00000550219 RANGRFQ9HD47 186 aaPredicted RBP10.26□□□□□ -0.77
NUP188-211ENST00000550219 KLK9Q9UKQ9 250 aa10.26□□□□□ -0.77
NUP188-211ENST00000550219 RCL1Q9Y2P8 373 aaKnown RBP10.26□□□□□ -0.77
NUP188-211ENST00000550219 CEBPZOSA8MTT3 80 aa10.25□□□□□ -0.77
NUP188-211ENST00000550219 K7EPK0 472 aa10.25□□□□□ -0.77
NUP188-211ENST00000550219 NXPH3O95157 252 aa10.25□□□□□ -0.77
NUP188-211ENST00000550219 BRI3O95415 125 aa10.25□□□□□ -0.77
NUP188-211ENST00000550219 OR13C7P0DN81 318 aa10.25□□□□□ -0.77
NUP188-211ENST00000550219 AREGP15514 252 aa10.25□□□□□ -0.77
NUP188-211ENST00000550219 ZP3P21754 424 aa10.25□□□□□ -0.77
NUP188-211ENST00000550219 PSMB6P28072 239 aa10.25□□□□□ -0.77
NUP188-211ENST00000550219 HOXA1P49639 335 aaPredicted RBP10.25□□□□□ -0.77
NUP188-211ENST00000550219 BCAP31P51572 246 aa10.25□□□□□ -0.77
NUP188-211ENST00000550219 POLR2GP62487 172 aaKnown RBP eCLIP10.25□□□□□ -0.77
NUP188-211ENST00000550219 RAB32Q13637 225 aa10.25□□□□□ -0.77
NUP188-211ENST00000550219 BSXQ3C1V8 233 aa10.25□□□□□ -0.77
NUP188-211ENST00000550219 ZNF114Q8NC26 417 aa10.25□□□□□ -0.77
NUP188-211ENST00000550219 DTD1Q8TEA8 209 aa10.25□□□□□ -0.77
NUP188-211ENST00000550219 TENM3Q9P273 2699 aa10.25□□□□□ -0.77
NUP188-211ENST00000550219 RYR3Q15413 4870 aa10.24□□□□□ -0.77
NUP188-211ENST00000550219 hCG_2014768A0A024R1R8 64 aa10.24□□□□□ -0.77
NUP188-211ENST00000550219 A0A0G2JLM5 398 aa10.24□□□□□ -0.77
NUP188-211ENST00000550219 H3BUA1 57 aa10.24□□□□□ -0.77
NUP188-211ENST00000550219 IGHV4-30-4P0DP06 118 aa10.24□□□□□ -0.77
NUP188-211ENST00000550219 PAX9P55771 341 aa10.24□□□□□ -0.77
NUP188-211ENST00000550219 RAP2BP61225 183 aa10.24□□□□□ -0.77
NUP188-211ENST00000550219 ERHP84090 104 aaKnown RBP10.24□□□□□ -0.77
NUP188-211ENST00000550219 CASC10Q5T4H9 136 aa10.24□□□□□ -0.77
NUP188-211ENST00000550219 PVRIGQ6DKI7 326 aa10.24□□□□□ -0.77
NUP188-211ENST00000550219 PPP1R1CQ8WVI7 109 aa10.24□□□□□ -0.77
NUP188-211ENST00000550219 CIB3Q96Q77 187 aaPredicted RBP10.24□□□□□ -0.77
NUP188-211ENST00000550219 MAGT1Q9H0U3 335 aa10.24□□□□□ -0.77
NUP188-211ENST00000550219 ENY2Q9NPA8 101 aa10.24□□□□□ -0.77
NUP188-211ENST00000550219 H0YIZ8 118 aa10.23□□□□□ -0.77
NUP188-211ENST00000550219 TMEM50AO95807 157 aa10.23□□□□□ -0.77
NUP188-211ENST00000550219 SCGB1D2O95969 90 aa10.23□□□□□ -0.77
NUP188-211ENST00000550219 IGLV1-51P01701 117 aa10.23□□□□□ -0.77
NUP188-211ENST00000550219 TRBV12-3P01733 135 aa10.23□□□□□ -0.77
NUP188-211ENST00000550219 ATP5IP56385 69 aaPredicted RBP10.23□□□□□ -0.77
NUP188-211ENST00000550219 SYNJ2BPP57105 145 aa10.23□□□□□ -0.77
NUP188-211ENST00000550219 TAS2R30P59541 319 aa10.23□□□□□ -0.77
NUP188-211ENST00000550219 OR9G4Q8NGQ1 327 aa10.23□□□□□ -0.77
NUP188-211ENST00000550219 SMIM8Q96KF7 97 aa10.23□□□□□ -0.77
NUP188-211ENST00000550219 RAB40CQ96S21 281 aa10.23□□□□□ -0.77
NUP188-211ENST00000550219 RNF126Q9BV68 326 aa10.23□□□□□ -0.77
NUP188-211ENST00000550219 HIPK2Q9H2X6 1198 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms