RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 IL22RA2Q969J5 263 aa13.04□□□□□ -0.32
CHMP1A-208ENST00000550102 MARC2Q969Z3 335 aa13.04□□□□□ -0.32
CHMP1A-208ENST00000550102 GALNT14Q96FL9 552 aa13.04□□□□□ -0.32
CHMP1A-208ENST00000550102 ZNF436Q9C0F3 470 aaPredicted RBP13.04□□□□□ -0.32
CHMP1A-208ENST00000550102 ENY2Q9NPA8 101 aa13.04□□□□□ -0.32
CHMP1A-208ENST00000550102 KCNIP3Q9Y2W7 256 aa13.04□□□□□ -0.32
CHMP1A-208ENST00000550102 F8W735 103 aaPredicted RBP13.03□□□□□ -0.32
CHMP1A-208ENST00000550102 IGHV4-30-4P0DP06 118 aa13.03□□□□□ -0.32
CHMP1A-208ENST00000550102 AKR1C4P17516 323 aa13.03□□□□□ -0.32
CHMP1A-208ENST00000550102 ELLP55199 621 aaPredicted RBP13.03□□□□□ -0.32
CHMP1A-208ENST00000550102 AARDQ4LEZ3 155 aa13.03□□□□□ -0.32
CHMP1A-208ENST00000550102 ASCL2Q99929 193 aa13.03□□□□□ -0.32
CHMP1A-208ENST00000550102 SRRQ9GZT4 340 aa13.03□□□□□ -0.32
CHMP1A-208ENST00000550102 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.03□□□□□ -0.32
CHMP1A-208ENST00000550102 CACNG5Q9UF02 275 aa13.03□□□□□ -0.32
CHMP1A-208ENST00000550102 TMEM56-RWDD3S4R434 201 aa13.03□□□□□ -0.32
CHMP1A-208ENST00000550102 I3L2K1 104 aa13.02□□□□□ -0.33
CHMP1A-208ENST00000550102 NDUFA4O00483 81 aa13.02□□□□□ -0.33
CHMP1A-208ENST00000550102 MT-CO2P00403 227 aa13.02□□□□□ -0.33
CHMP1A-208ENST00000550102 ANXA3P12429 323 aa13.02□□□□□ -0.33
CHMP1A-208ENST00000550102 SUB1P53999 127 aaKnown RBP eCLIP13.02□□□□□ -0.333e-8■■□□□ 12.4
CHMP1A-208ENST00000550102 MFAP4P55083 255 aa13.02□□□□□ -0.33
CHMP1A-208ENST00000550102 SPCS3P61009 180 aa13.02□□□□□ -0.33
CHMP1A-208ENST00000550102 SRPXP78539 464 aa13.02□□□□□ -0.33
CHMP1A-208ENST00000550102 TMEM187Q14656 261 aa13.02□□□□□ -0.33
CHMP1A-208ENST00000550102 TM4SF20Q53R12 229 aa13.02□□□□□ -0.33
CHMP1A-208ENST00000550102 Q6ZRM9 215 aa13.02□□□□□ -0.33
CHMP1A-208ENST00000550102 UXS1Q8NBZ7 420 aa13.02□□□□□ -0.33
CHMP1A-208ENST00000550102 PINX1Q96BK5 328 aaKnown RBP13.02□□□□□ -0.33
CHMP1A-208ENST00000550102 TXN2Q99757 166 aa13.02□□□□□ -0.33
CHMP1A-208ENST00000550102 CHRDL1Q9BU40 450 aa13.02□□□□□ -0.33
CHMP1A-208ENST00000550102 DAZ1Q9NQZ3 744 aaKnown RBP13.02□□□□□ -0.33
CHMP1A-208ENST00000550102 NDUFA13Q9P0J0 144 aa13.02□□□□□ -0.33
CHMP1A-208ENST00000550102 U3KQK5 164 aa13.02□□□□□ -0.33
CHMP1A-208ENST00000550102 CORTO00230 105 aa13.01□□□□□ -0.33
CHMP1A-208ENST00000550102 NUPL2O15504 423 aaKnown RBP13.01□□□□□ -0.33
CHMP1A-208ENST00000550102 FCGR2BP31994 310 aaPredicted RBP13.01□□□□□ -0.33
CHMP1A-208ENST00000550102 CD81P60033 236 aa13.01□□□□□ -0.33
CHMP1A-208ENST00000550102 SUPT4H1P63272 117 aaKnown RBP13.01□□□□□ -0.33
CHMP1A-208ENST00000550102 GUCA2BQ16661 112 aa13.01□□□□□ -0.33
CHMP1A-208ENST00000550102 TRIQKQ629K1 86 aa13.01□□□□□ -0.33
CHMP1A-208ENST00000550102 ZNF57Q68EA5 555 aaPredicted RBP13.01□□□□□ -0.33
CHMP1A-208ENST00000550102 BTNL8Q6UX41 500 aa13.01□□□□□ -0.33
CHMP1A-208ENST00000550102 TMED4Q7Z7H5 227 aa13.01□□□□□ -0.33
CHMP1A-208ENST00000550102 TMEM61Q8N0U2 210 aa13.01□□□□□ -0.33
CHMP1A-208ENST00000550102 OR52E5Q8NH55 327 aa13.01□□□□□ -0.33
CHMP1A-208ENST00000550102 PRR13Q9NZ81 148 aa13.01□□□□□ -0.33
CHMP1A-208ENST00000550102 CACFD1Q9UGQ2 172 aa13.01□□□□□ -0.33
CHMP1A-208ENST00000550102 MLXQ9UH92 298 aa13.01□□□□□ -0.33
CHMP1A-208ENST00000550102 PIGBOS1A0A0B4J2F0 54 aa13□□□□□ -0.33
CHMP1A-208ENST00000550102 A8MZ25 164 aa13□□□□□ -0.33
CHMP1A-208ENST00000550102 SULT1A3P0DMM9 295 aa13□□□□□ -0.33
CHMP1A-208ENST00000550102 SULT1A4P0DMN0 295 aa13□□□□□ -0.33
CHMP1A-208ENST00000550102 RNASE2P10153 161 aaKnown RBP13□□□□□ -0.33
CHMP1A-208ENST00000550102 ADMP35318 185 aa13□□□□□ -0.33
CHMP1A-208ENST00000550102 INPP1P49441 399 aa13□□□□□ -0.33
CHMP1A-208ENST00000550102 RELQ04864 619 aaPredicted RBP13□□□□□ -0.33
CHMP1A-208ENST00000550102 GPR146Q96CH1 333 aa13□□□□□ -0.33
CHMP1A-208ENST00000550102 WDR89Q96FK6 387 aaPredicted RBP13□□□□□ -0.33
CHMP1A-208ENST00000550102 SLC25A21Q9BQT8 299 aaPredicted RBP13□□□□□ -0.33
CHMP1A-208ENST00000550102 MRPL27Q9P0M9 148 aaKnown RBP13□□□□□ -0.33
CHMP1A-208ENST00000550102 A0A0B4J2A0 478 aa12.99□□□□□ -0.33
CHMP1A-208ENST00000550102 GNG7O60262 68 aa12.99□□□□□ -0.33
CHMP1A-208ENST00000550102 IGHV3-48P01763 117 aa12.99□□□□□ -0.33
CHMP1A-208ENST00000550102 CTSGP08311 255 aa12.99□□□□□ -0.33
CHMP1A-208ENST00000550102 C8orf88P0DMB2 117 aa12.99□□□□□ -0.33
CHMP1A-208ENST00000550102 PVRIGQ6DKI7 326 aa12.99□□□□□ -0.33
CHMP1A-208ENST00000550102 SBSPONQ8IVN8 264 aa12.99□□□□□ -0.33
CHMP1A-208ENST00000550102 LGI3Q8N145 548 aa12.99□□□□□ -0.33
CHMP1A-208ENST00000550102 NEURL2Q9BR09 285 aa12.99□□□□□ -0.33
CHMP1A-208ENST00000550102 C20orf24Q9BUV8 137 aa12.99□□□□□ -0.33
CHMP1A-208ENST00000550102 C19orf73Q9NVV2 129 aa12.99□□□□□ -0.33
CHMP1A-208ENST00000550102 SHPKQ9UHJ6 478 aa12.99□□□□□ -0.33
CHMP1A-208ENST00000550102 ZNF785A8K8V0 405 aa12.98□□□□□ -0.33
CHMP1A-208ENST00000550102 NPBWR1P48145 328 aa12.98□□□□□ -0.33
CHMP1A-208ENST00000550102 RBMS2Q15434 407 aaKnown RBP12.98□□□□□ -0.33
CHMP1A-208ENST00000550102 BSXQ3C1V8 233 aa12.98□□□□□ -0.33
CHMP1A-208ENST00000550102 TMEM128Q5BJH2 165 aa12.98□□□□□ -0.33
CHMP1A-208ENST00000550102 NMSQ5H8A3 153 aa12.98□□□□□ -0.33
CHMP1A-208ENST00000550102 TUBA4BQ9H853 241 aa12.98□□□□□ -0.33
CHMP1A-208ENST00000550102 HEYLQ9NQ87 328 aaPredicted RBP12.98□□□□□ -0.33
CHMP1A-208ENST00000550102 SELENOKQ9Y6D0 94 aa12.98□□□□□ -0.33
CHMP1A-208ENST00000550102 IGHV3OR16-8A0A075B7F1 116 aa12.97□□□□□ -0.33
CHMP1A-208ENST00000550102 TRAV25A0A0B4J276 109 aa12.97□□□□□ -0.33
CHMP1A-208ENST00000550102 C15orf62A8K5M9 175 aa12.97□□□□□ -0.33
CHMP1A-208ENST00000550102 CEBPZOSA8MTT3 80 aa12.97□□□□□ -0.33
CHMP1A-208ENST00000550102 VAMP1P23763 118 aa12.97□□□□□ -0.33
CHMP1A-208ENST00000550102 HTR2BP41595 481 aa12.97□□□□□ -0.33
CHMP1A-208ENST00000550102 SMCO1Q147U7 214 aa12.97□□□□□ -0.33
CHMP1A-208ENST00000550102 SLC16A13Q7RTY0 426 aa12.97□□□□□ -0.33
CHMP1A-208ENST00000550102 DUSP18Q8NEJ0 188 aa12.97□□□□□ -0.33
CHMP1A-208ENST00000550102 WWC2-AS2Q96NR7 200 aa12.97□□□□□ -0.33
CHMP1A-208ENST00000550102 DUXBA0A1W2PPF3 345 aa12.96□□□□□ -0.33
CHMP1A-208ENST00000550102 NAP1L6A6NFF2 107 aa12.96□□□□□ -0.33
CHMP1A-208ENST00000550102 K7EMT4 169 aa12.96□□□□□ -0.33
CHMP1A-208ENST00000550102 SCAF4O95104 1147 aaKnown RBP12.96□□□□□ -0.33
CHMP1A-208ENST00000550102 NXPH3O95157 252 aa12.96□□□□□ -0.33
CHMP1A-208ENST00000550102 CD7P09564 240 aa12.96□□□□□ -0.33
CHMP1A-208ENST00000550102 OPRK1P41145 380 aa12.96□□□□□ -0.33
CHMP1A-208ENST00000550102 CCR6P51684 374 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms