RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 CD74P04233 296 aa11.79□□□□□ -0.52
COX6A1-203ENST00000550009 RPL35AP18077 110 aaKnown RBP11.79□□□□□ -0.52
COX6A1-203ENST00000550009 ETV6P41212 452 aa11.79□□□□□ -0.52
COX6A1-203ENST00000550009 TFPI2P48307 235 aa11.79□□□□□ -0.52
COX6A1-203ENST00000550009 SCGB2B2Q4G0G5 96 aa11.79□□□□□ -0.52
COX6A1-203ENST00000550009 SPSB3Q6PJ21 355 aa11.79□□□□□ -0.52
COX6A1-203ENST00000550009 TSC22D3Q99576 134 aa11.79□□□□□ -0.52
COX6A1-203ENST00000550009 FKBP11Q9NYL4 201 aa11.79□□□□□ -0.52
COX6A1-203ENST00000550009 PRR13Q9NZ81 148 aa11.79□□□□□ -0.52
COX6A1-203ENST00000550009 SMPXQ9UHP9 88 aa11.79□□□□□ -0.52
COX6A1-203ENST00000550009 FRAS1Q86XX4 4008 aa11.79□□□□□ -0.52
COX6A1-203ENST00000550009 C3orf85A0A1B0GTC6 90 aa11.78□□□□□ -0.52
COX6A1-203ENST00000550009 CHEK1O14757 476 aa11.78□□□□□ -0.52
COX6A1-203ENST00000550009 RGS5O15539 181 aa11.78□□□□□ -0.52
COX6A1-203ENST00000550009 DEFB135Q30KP9 77 aa11.78□□□□□ -0.52
COX6A1-203ENST00000550009 GBGT1Q8N5D6 347 aa11.78□□□□□ -0.52
COX6A1-203ENST00000550009 TMEM229BQ8NBD8 167 aa11.78□□□□□ -0.52
COX6A1-203ENST00000550009 ZNF114Q8NC26 417 aa11.78□□□□□ -0.52
COX6A1-203ENST00000550009 SPAG8Q99932 426 aaPredicted RBP11.78□□□□□ -0.52
COX6A1-203ENST00000550009 RTBDNQ9BSG5 229 aaPredicted RBP11.78□□□□□ -0.52
COX6A1-203ENST00000550009 MRPS26Q9BYN8 205 aaKnown RBP11.78□□□□□ -0.52
COX6A1-203ENST00000550009 NXF2Q9GZY0 626 aaKnown RBP11.78□□□□□ -0.52
COX6A1-203ENST00000550009 FNDC4Q9H6D8 234 aaPredicted RBP11.78□□□□□ -0.52
COX6A1-203ENST00000550009 IGHV7-4-1A0A0J9YVY3 117 aa11.77□□□□□ -0.53
COX6A1-203ENST00000550009 CYB5BO43169 146 aa11.77□□□□□ -0.53
COX6A1-203ENST00000550009 YIF1AO95070 293 aa11.77□□□□□ -0.53
COX6A1-203ENST00000550009 RAB3DO95716 219 aa11.77□□□□□ -0.53
COX6A1-203ENST00000550009 RNASE2P10153 161 aaKnown RBP11.77□□□□□ -0.53
COX6A1-203ENST00000550009 S100GP29377 79 aa11.77□□□□□ -0.53
COX6A1-203ENST00000550009 MFAP4P55083 255 aa11.77□□□□□ -0.53
COX6A1-203ENST00000550009 STEAP1BQ6NZ63 245 aa11.77□□□□□ -0.53
COX6A1-203ENST00000550009 GPR141Q7Z602 305 aa11.77□□□□□ -0.53
COX6A1-203ENST00000550009 CLVS1Q8IUQ0 354 aaPredicted RBP11.77□□□□□ -0.53
COX6A1-203ENST00000550009 TERB2Q8NHR7 220 aa11.77□□□□□ -0.53
COX6A1-203ENST00000550009 RHPN1-AS1Q9BWJ2 59 aa11.77□□□□□ -0.53
COX6A1-203ENST00000550009 VPS13DQ5THJ4 4388 aa11.76□□□□□ -0.53
COX6A1-203ENST00000550009 A0A0J9YWU9 116 aa11.76□□□□□ -0.53
COX6A1-203ENST00000550009 A0A1B0GU03 582 aa11.76□□□□□ -0.53
COX6A1-203ENST00000550009 C15orf62A8K5M9 175 aa11.76□□□□□ -0.53
COX6A1-203ENST00000550009 K7EMT4 169 aa11.76□□□□□ -0.53
COX6A1-203ENST00000550009 NUPL2O15504 423 aaKnown RBP11.76□□□□□ -0.53
COX6A1-203ENST00000550009 NXPH3O95157 252 aa11.76□□□□□ -0.53
COX6A1-203ENST00000550009 OR5AC1P0C628 307 aa11.76□□□□□ -0.53
COX6A1-203ENST00000550009 FCGR2BP31994 310 aaPredicted RBP11.76□□□□□ -0.53
COX6A1-203ENST00000550009 AKR1C2P52895 323 aa11.76□□□□□ -0.53
COX6A1-203ENST00000550009 TRIM16LQ309B1 348 aa11.76□□□□□ -0.53
COX6A1-203ENST00000550009 ANKRD55Q3KP44 614 aa11.76□□□□□ -0.53
COX6A1-203ENST00000550009 FAM90A2PQ658T7 463 aa11.76□□□□□ -0.53
COX6A1-203ENST00000550009 TOMM20LQ6UXN7 152 aa11.76□□□□□ -0.53
COX6A1-203ENST00000550009 ARRDC1Q8N5I2 433 aa11.76□□□□□ -0.53
COX6A1-203ENST00000550009 FAM24BQ8N5W8 94 aa11.76□□□□□ -0.53
COX6A1-203ENST00000550009 TMEM116Q8NCL8 245 aa11.76□□□□□ -0.53
COX6A1-203ENST00000550009 OR4C16Q8NGL9 310 aa11.76□□□□□ -0.53
COX6A1-203ENST00000550009 ST8SIA2Q92186 375 aa11.76□□□□□ -0.53
COX6A1-203ENST00000550009 AP3S1Q92572 193 aa11.76□□□□□ -0.53
COX6A1-203ENST00000550009 OR10C1Q96KK4 312 aa11.76□□□□□ -0.53
COX6A1-203ENST00000550009 ZFAND3Q9H8U3 227 aa11.76□□□□□ -0.53
COX6A1-203ENST00000550009 GABARAPH6UMI1 98 aa11.75□□□□□ -0.53
COX6A1-203ENST00000550009 IFNA17P01571 189 aa11.75□□□□□ -0.53
COX6A1-203ENST00000550009 UCP1P25874 307 aa11.75□□□□□ -0.53
COX6A1-203ENST00000550009 TAS2R19P59542 299 aa11.75□□□□□ -0.53
COX6A1-203ENST00000550009 MEF2DQ14814 521 aa11.75□□□□□ -0.53
COX6A1-203ENST00000550009 DYNC2LI1Q8TCX1 351 aa11.75□□□□□ -0.53
COX6A1-203ENST00000550009 ZNF486Q96H40 463 aaPredicted RBP11.75□□□□□ -0.53
COX6A1-203ENST00000550009 COPZ2Q9P299 210 aa11.75□□□□□ -0.53
COX6A1-203ENST00000550009 GNG7O60262 68 aa11.74□□□□□ -0.53
COX6A1-203ENST00000550009 ERHP84090 104 aaKnown RBP11.74□□□□□ -0.53
COX6A1-203ENST00000550009 PMS2P11Q13670 270 aa11.74□□□□□ -0.53
COX6A1-203ENST00000550009 PVRIGQ6DKI7 326 aa11.74□□□□□ -0.53
COX6A1-203ENST00000550009 WFDC3Q8IUB2 231 aa11.74□□□□□ -0.53
COX6A1-203ENST00000550009 SLC35G3Q8N808 338 aa11.74□□□□□ -0.53
COX6A1-203ENST00000550009 GLYATL2Q8WU03 294 aa11.74□□□□□ -0.53
COX6A1-203ENST00000550009 ATP6V0BQ99437 205 aa11.74□□□□□ -0.53
COX6A1-203ENST00000550009 TMEM50AO95807 157 aa11.73□□□□□ -0.53
COX6A1-203ENST00000550009 HOXA1P49639 335 aaPredicted RBP11.73□□□□□ -0.53
COX6A1-203ENST00000550009 RELQ04864 619 aaPredicted RBP11.73□□□□□ -0.53
COX6A1-203ENST00000550009 LAMTOR1Q6IAA8 161 aa11.73□□□□□ -0.53
COX6A1-203ENST00000550009 SELENOHQ8IZQ5 122 aaKnown RBP11.73□□□□□ -0.53
COX6A1-203ENST00000550009 IL17DQ8TAD2 202 aa11.73□□□□□ -0.53
COX6A1-203ENST00000550009 TMEM170AQ8WVE7 144 aa11.73□□□□□ -0.53
COX6A1-203ENST00000550009 SMIM4Q8WVI0 70 aa11.73□□□□□ -0.53
COX6A1-203ENST00000550009 TMEM230Q96A57 120 aa11.73□□□□□ -0.53
COX6A1-203ENST00000550009 GPR146Q96CH1 333 aa11.73□□□□□ -0.53
COX6A1-203ENST00000550009 PUS1Q9Y606 427 aaKnown RBP eCLIP11.73□□□□□ -0.53
COX6A1-203ENST00000550009 TRAV14DV4A0A0A6YYC5 116 aa11.72□□□□□ -0.53
COX6A1-203ENST00000550009 SPRY2O43597 315 aa11.72□□□□□ -0.53
COX6A1-203ENST00000550009 DFFBO76075 338 aa11.72□□□□□ -0.53
COX6A1-203ENST00000550009 TBPP20226 339 aa11.72□□□□□ -0.53
COX6A1-203ENST00000550009 TNFRSF9Q07011 255 aa11.72□□□□□ -0.53
COX6A1-203ENST00000550009 IL18Q14116 193 aa11.72□□□□□ -0.53
COX6A1-203ENST00000550009 TCF24Q7RTU0 167 aa11.72□□□□□ -0.53
COX6A1-203ENST00000550009 LYG2Q86SG7 212 aa11.72□□□□□ -0.53
COX6A1-203ENST00000550009 OR51S1Q8NGJ8 323 aa11.72□□□□□ -0.53
COX6A1-203ENST00000550009 ZFAND1Q8TCF1 268 aa11.72□□□□□ -0.53
COX6A1-203ENST00000550009 DIRAS2Q96HU8 199 aa11.72□□□□□ -0.53
COX6A1-203ENST00000550009 TXN2Q99757 166 aa11.72□□□□□ -0.53
COX6A1-203ENST00000550009 TMEM222Q9H0R3 208 aa11.72□□□□□ -0.53
COX6A1-203ENST00000550009 MAP6D1Q9H9H5 199 aa11.72□□□□□ -0.53
COX6A1-203ENST00000550009 DNAH10Q8IVF4 4471 aa11.72□□□□□ -0.53
COX6A1-203ENST00000550009 TEX13DA0A0J9YY54 714 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms