RNA–Protein interactions for RNA: ENST00000549347.1

RAPGEF3-220, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene RAPGEF3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-220ENST00000549347 OR1S1Q8NH92 325 aa13.57□□□□□ -0.24
RAPGEF3-220ENST00000549347 ATP6V0BQ99437 205 aa13.57□□□□□ -0.24
RAPGEF3-220ENST00000549347 S4R3C0 116 aa13.57□□□□□ -0.24
RAPGEF3-220ENST00000549347 FBN3Q75N90 2809 aa13.56□□□□□ -0.24
RAPGEF3-220ENST00000549347 CEBPZOSA8MTT3 80 aa13.56□□□□□ -0.24
RAPGEF3-220ENST00000549347 CORTO00230 105 aa13.56□□□□□ -0.24
RAPGEF3-220ENST00000549347 ADAP1O75689 374 aa13.56□□□□□ -0.24
RAPGEF3-220ENST00000549347 KLF5Q13887 457 aaPredicted RBP13.56□□□□□ -0.24
RAPGEF3-220ENST00000549347 RPEL1Q2QD12 228 aa13.56□□□□□ -0.24
RAPGEF3-220ENST00000549347 NRARPQ7Z6K4 114 aa13.56□□□□□ -0.24
RAPGEF3-220ENST00000549347 C1QL4Q86Z23 238 aa13.56□□□□□ -0.24
RAPGEF3-220ENST00000549347 FAM90A26D6RGX4 464 aa13.55□□□□□ -0.24
RAPGEF3-220ENST00000549347 PPP5D1E7EU14 171 aa13.55□□□□□ -0.24
RAPGEF3-220ENST00000549347 I3L2K1 104 aa13.55□□□□□ -0.24
RAPGEF3-220ENST00000549347 HTR2BP41595 481 aa13.55□□□□□ -0.24
RAPGEF3-220ENST00000549347 SUB1P53999 127 aaKnown RBP eCLIP13.55□□□□□ -0.24
RAPGEF3-220ENST00000549347 CLEC19AQ6UXS0 136 aa13.55□□□□□ -0.24
RAPGEF3-220ENST00000549347 ZNF431Q8TF32 576 aaPredicted RBP13.55□□□□□ -0.24
RAPGEF3-220ENST00000549347 SCARB1Q8WTV0 552 aa13.55□□□□□ -0.24
RAPGEF3-220ENST00000549347 MISP3Q96FF7 219 aa13.55□□□□□ -0.24
RAPGEF3-220ENST00000549347 SEC22CQ9BRL7 303 aa13.55□□□□□ -0.24
RAPGEF3-220ENST00000549347 C21orf62Q9NYP8 219 aa13.55□□□□□ -0.24
RAPGEF3-220ENST00000549347 SEC14L6B5MCN3 397 aa13.54□□□□□ -0.24
RAPGEF3-220ENST00000549347 GGCTO75223 188 aaKnown RBP13.54□□□□□ -0.24
RAPGEF3-220ENST00000549347 IFNA21P01568 189 aa13.54□□□□□ -0.24
RAPGEF3-220ENST00000549347 IL5P05113 134 aa13.54□□□□□ -0.24
RAPGEF3-220ENST00000549347 ARL3P36405 182 aa13.54□□□□□ -0.24
RAPGEF3-220ENST00000549347 C9orf66Q5T8R8 295 aa13.54□□□□□ -0.24
RAPGEF3-220ENST00000549347 SLC24A4Q8NFF2 622 aa13.54□□□□□ -0.24
RAPGEF3-220ENST00000549347 DTD1Q8TEA8 209 aa13.54□□□□□ -0.24
RAPGEF3-220ENST00000549347 RBKSQ9H477 322 aa13.54□□□□□ -0.24
RAPGEF3-220ENST00000549347 HEYLQ9NQ87 328 aaPredicted RBP13.54□□□□□ -0.24
RAPGEF3-220ENST00000549347 MPTX1A8MV57 137 aa13.53□□□□□ -0.24
RAPGEF3-220ENST00000549347 F8W735 103 aaPredicted RBP13.53□□□□□ -0.24
RAPGEF3-220ENST00000549347 MT-CO2P00403 227 aa13.53□□□□□ -0.24
RAPGEF3-220ENST00000549347 FCGR2BP31994 310 aaPredicted RBP13.53□□□□□ -0.24
RAPGEF3-220ENST00000549347 GPR183P32249 361 aa13.53□□□□□ -0.24
RAPGEF3-220ENST00000549347 SYNJ2BPP57105 145 aa13.53□□□□□ -0.24
RAPGEF3-220ENST00000549347 C2orf83Q53S99 150 aa13.53□□□□□ -0.24
RAPGEF3-220ENST00000549347 C11orf87Q6NUJ2 197 aa13.53□□□□□ -0.24
RAPGEF3-220ENST00000549347 ACSM6Q6P461 480 aa13.53□□□□□ -0.24
RAPGEF3-220ENST00000549347 PLET1Q6UQ28 207 aa13.53□□□□□ -0.24
RAPGEF3-220ENST00000549347 HIPK2Q9H2X6 1198 aa13.53□□□□□ -0.24
RAPGEF3-220ENST00000549347 IGHV3-21A0A0B4J1V1 117 aa13.52□□□□□ -0.25
RAPGEF3-220ENST00000549347 CLEC3BP05452 202 aa13.52□□□□□ -0.25
RAPGEF3-220ENST00000549347 INSL3P51460 131 aa13.52□□□□□ -0.25
RAPGEF3-220ENST00000549347 EGFEM1PQ0D2K5 195 aa13.52□□□□□ -0.25
RAPGEF3-220ENST00000549347 TMEM170AQ8WVE7 144 aa13.52□□□□□ -0.25
RAPGEF3-220ENST00000549347 PINX1Q96BK5 328 aaKnown RBP13.52□□□□□ -0.25
RAPGEF3-220ENST00000549347 BSCL2Q96G97 398 aaPredicted RBP13.52□□□□□ -0.25
RAPGEF3-220ENST00000549347 MARVELD1Q9BSK0 173 aa13.52□□□□□ -0.25
RAPGEF3-220ENST00000549347 TGOLN2O43493 480 aa13.51□□□□□ -0.25
RAPGEF3-220ENST00000549347 MED6O75586 246 aa13.51□□□□□ -0.25
RAPGEF3-220ENST00000549347 NPY1RP25929 384 aa13.51□□□□□ -0.25
RAPGEF3-220ENST00000549347 TATDN3Q17R31 274 aa13.51□□□□□ -0.25
RAPGEF3-220ENST00000549347 SPSB3Q6PJ21 355 aa13.51□□□□□ -0.25
RAPGEF3-220ENST00000549347 REC114Q7Z4M0 266 aa13.51□□□□□ -0.25
RAPGEF3-220ENST00000549347 GPHB5Q86YW7 130 aa13.51□□□□□ -0.25
RAPGEF3-220ENST00000549347 OR4D5Q8NGN0 318 aa13.51□□□□□ -0.25
RAPGEF3-220ENST00000549347 OR9G4Q8NGQ1 327 aa13.51□□□□□ -0.25
RAPGEF3-220ENST00000549347 TXN2Q99757 166 aa13.51□□□□□ -0.25
RAPGEF3-220ENST00000549347 PALMDQ9NP74 551 aa13.51□□□□□ -0.25
RAPGEF3-220ENST00000549347 GAR1Q9NY12 217 aaKnown RBP13.51□□□□□ -0.25
RAPGEF3-220ENST00000549347 NBEAL1Q6ZS30 2694 aa13.5□□□□□ -0.25
RAPGEF3-220ENST00000549347 OR2T8A6NH00 312 aa13.5□□□□□ -0.25
RAPGEF3-220ENST00000549347 LGALS9O00182 355 aa13.5□□□□□ -0.25
RAPGEF3-220ENST00000549347 PRAF2O60831 178 aa13.5□□□□□ -0.25
RAPGEF3-220ENST00000549347 OR2C1O95371 312 aa13.5□□□□□ -0.25
RAPGEF3-220ENST00000549347 MFAP4P55083 255 aa13.5□□□□□ -0.25
RAPGEF3-220ENST00000549347 NOXA1Q86UR1 476 aa13.5□□□□□ -0.25
RAPGEF3-220ENST00000549347 C12orf45Q8N5I9 185 aaPredicted RBP13.5□□□□□ -0.25
RAPGEF3-220ENST00000549347 RNASEH2CQ8TDP1 164 aaKnown RBP13.5□□□□□ -0.25
RAPGEF3-220ENST00000549347 ELOVL1Q9BW60 279 aa13.5□□□□□ -0.25
RAPGEF3-220ENST00000549347 FNDC4Q9H6D8 234 aaPredicted RBP13.5□□□□□ -0.25
RAPGEF3-220ENST00000549347 U3KQ87 197 aa13.5□□□□□ -0.25
RAPGEF3-220ENST00000549347 INMT-MINDY4F8WBC2 141 aa13.49□□□□□ -0.25
RAPGEF3-220ENST00000549347 SYNGR2O43760 224 aa13.49□□□□□ -0.25
RAPGEF3-220ENST00000549347 PTTG1O95997 202 aa13.49□□□□□ -0.25
RAPGEF3-220ENST00000549347 OPRK1P41145 380 aa13.49□□□□□ -0.25
RAPGEF3-220ENST00000549347 ATP5IP56385 69 aaPredicted RBP13.49□□□□□ -0.25
RAPGEF3-220ENST00000549347 ID3Q02535 119 aa13.49□□□□□ -0.25
RAPGEF3-220ENST00000549347 IAH1Q2TAA2 248 aaPredicted RBP13.49□□□□□ -0.25
RAPGEF3-220ENST00000549347 Q56UQ5 140 aa13.49□□□□□ -0.25
RAPGEF3-220ENST00000549347 IL34Q6ZMJ4 242 aa13.49□□□□□ -0.25
RAPGEF3-220ENST00000549347 UBAC2Q8NBM4 344 aa13.49□□□□□ -0.25
RAPGEF3-220ENST00000549347 OR10C1Q96KK4 312 aa13.49□□□□□ -0.25
RAPGEF3-220ENST00000549347 CIB3Q96Q77 187 aaPredicted RBP13.49□□□□□ -0.25
RAPGEF3-220ENST00000549347 ZNF436Q9C0F3 470 aaPredicted RBP13.49□□□□□ -0.25
RAPGEF3-220ENST00000549347 GPN1Q9HCN4 374 aaPredicted RBP13.49□□□□□ -0.25
RAPGEF3-220ENST00000549347 ZC4H2Q9NQZ6 224 aa13.49□□□□□ -0.25
RAPGEF3-220ENST00000549347 PEMTQ9UBM1 199 aa13.49□□□□□ -0.25
RAPGEF3-220ENST00000549347 RPS10-NUDT3A0A1W2PQS6 291 aa13.48□□□□□ -0.25
RAPGEF3-220ENST00000549347 SNRPGP15A8MWD9 76 aa13.48□□□□□ -0.25
RAPGEF3-220ENST00000549347 A8MWP6 167 aa13.48□□□□□ -0.25
RAPGEF3-220ENST00000549347 CCSO14618 274 aa13.48□□□□□ -0.25
RAPGEF3-220ENST00000549347 SAP30O75446 220 aa13.48□□□□□ -0.25
RAPGEF3-220ENST00000549347 LY86O95711 162 aa13.48□□□□□ -0.25
RAPGEF3-220ENST00000549347 IFNA10P01566 189 aa13.48□□□□□ -0.25
RAPGEF3-220ENST00000549347 ADMP35318 185 aa13.48□□□□□ -0.25
RAPGEF3-220ENST00000549347 ZBTB8BQ8NAP8 495 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms