RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 VMA21Q3ZAQ7 101 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 KHDC3LQ587J8 217 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 LCE2AQ5TA79 106 aaPredicted RBP3.78□□□□□ -1.8
SCAF11-212ENST00000549162 PRR27Q6MZM9 219 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 UBE2J2Q8N2K1 259 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 CNEP1R1Q8N9A8 125 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 TMEM75Q8N9X5 138 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 MARCH1Q8TCQ1 289 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 TMEM203Q969S6 136 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 BTF3L4Q96K17 158 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 OR1A1Q9P1Q5 309 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 SOX21Q9Y651 276 aaPredicted RBP3.78□□□□□ -1.8
SCAF11-212ENST00000549162 A0A0G2JRQ6 117 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 TCRBV4S1A1TA0A5B7 111 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 TMEM218A2RU14 115 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 F6UZH7 168 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 SNRPEP62304 92 aaKnown RBP3.78□□□□□ -1.8
SCAF11-212ENST00000549162 BLOC1S1P78537 153 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 MXD1Q05195 221 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 GNMTQ14749 295 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 BTNL3Q6UXE8 466 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 TMEM252Q8N6L7 170 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 ZNF747Q9BV97 191 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 MLST8Q9BVC4 326 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 SAV1Q9H4B6 383 aaPredicted RBP3.78□□□□□ -1.8
SCAF11-212ENST00000549162 ZNF256Q9Y2P7 627 aaPredicted RBP3.78□□□□□ -1.8
SCAF11-212ENST00000549162 CYB5BO43169 146 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 HBE1P02100 147 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 APOA2P02652 100 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 OR5AC1P0C628 307 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 HNF1AP20823 631 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 HTR1DP28221 377 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 RPS27P42677 84 aaKnown RBP3.78□□□□□ -1.8
SCAF11-212ENST00000549162 CDX1P47902 265 aaPredicted RBP3.78□□□□□ -1.8
SCAF11-212ENST00000549162 UQCRFS1P47985 274 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 ERVFC1-1P60608 527 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 RPL31P62899 125 aaKnown RBP3.78□□□□□ -1.8
SCAF11-212ENST00000549162 EWSR1Q01844 656 aaKnown RBP eCLIP3.78□□□□□ -1.8
SCAF11-212ENST00000549162 SRYQ05066 204 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 TAF9Q16594 264 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 GVQW1Q8N7I0 195 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 OR10G8Q8NGN5 311 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 GATAD1Q8WUU5 269 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 SEC11CQ9BY50 192 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 RBKSQ9H477 322 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 NUDT15Q9NV35 164 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 ZNF581Q9P0T4 197 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 ZNF98A6NK75 572 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 LINC00694P0DN24 101 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 TAS2R60P59551 318 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 COX19Q49B96 90 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 Q6ZRM9 215 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 OR1B1Q8NGR6 318 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 OR51H1Q8NH63 302 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 IGF2BP2-AS1Q96M15 143 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 SPACA5Q96QH8 159 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 PRSS22Q9GZN4 317 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 SCRT2Q9NQ03 307 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 IL36RNQ9UBH0 155 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 PSG11Q9UQ72 335 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 TRGV11A0A075B6L2 103 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 IFNA21P01568 189 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 AMBPP02760 352 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 REG1AP05451 166 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 OR9G9P0C7N8 305 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 PATE4P0C8F1 98 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 GP9P14770 177 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 IL2RGP31785 369 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 CEACAM6P40199 344 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 INSL3P51460 131 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 HERV-K104P61576 105 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 RPL23AP62750 156 aaKnown RBP3.77□□□□□ -1.81
SCAF11-212ENST00000549162 PNRC1Q12796 327 aaPredicted RBP3.77□□□□□ -1.81
SCAF11-212ENST00000549162 Q5BKY6 102 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 NDUFA11Q86Y39 141 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 ZNF709Q8N972 641 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 OR5C1Q8NGR4 320 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 LHX4Q969G2 390 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 TOMM40LQ969M1 308 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 RNF183Q96D59 192 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 IGSF23A1L1A6 192 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 CLPSL1A2RUU4 121 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 K7EMI3 77 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 CLN5O75503 358 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 IFNA7P01567 189 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 PTHLHP12272 177 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 CXCL3P19876 107 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 BRS3P32247 399 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 BEAN1Q3B7T3 259 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 RNF212Q495C1 297 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 FAM159AQ6UWV7 190 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 ZNF575Q86XF7 245 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 ABHD12Q8N2K0 398 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 NECAP1Q8NC96 275 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 C17orf50Q8WW18 174 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 QTRT1Q9BXR0 403 aaKnown RBP3.77□□□□□ -1.81
SCAF11-212ENST00000549162 SIRT7Q9NRC8 400 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 CCL28Q9NRJ3 127 aa3.77□□□□□ -1.81
SCAF11-212ENST00000549162 A0A1B0GW15 77 aa3.76□□□□□ -1.81
SCAF11-212ENST00000549162 KRBOX1C9JBD0 128 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms