RNA–Protein interactions for RNA: ENST00000549131.1

LINC00661-203, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-203ENST00000549131 C8orf88P0DMB2 117 aa11.03□□□□□ -0.64
LINC00661-203ENST00000549131 UCP1P25874 307 aa11.03□□□□□ -0.64
LINC00661-203ENST00000549131 ADMP35318 185 aa11.03□□□□□ -0.64
LINC00661-203ENST00000549131 SNCAP37840 140 aa11.03□□□□□ -0.64
LINC00661-203ENST00000549131 HOXA1P49639 335 aaPredicted RBP11.03□□□□□ -0.64
LINC00661-203ENST00000549131 MCFD2Q8NI22 146 aa11.03□□□□□ -0.64
LINC00661-203ENST00000549131 CITED4Q96RK1 184 aa11.03□□□□□ -0.64
LINC00661-203ENST00000549131 PRRT1Q99946 306 aa11.03□□□□□ -0.64
LINC00661-203ENST00000549131 SLIRPQ9GZT3 109 aaKnown RBP11.03□□□□□ -0.64
LINC00661-203ENST00000549131 TMEM222Q9H0R3 208 aa11.03□□□□□ -0.64
LINC00661-203ENST00000549131 RETNQ9HD89 108 aa11.03□□□□□ -0.64
LINC00661-203ENST00000549131 GAR1Q9NY12 217 aaKnown RBP11.03□□□□□ -0.64
LINC00661-203ENST00000549131 TRAV25A0A0B4J276 109 aa11.02□□□□□ -0.65
LINC00661-203ENST00000549131 A0A0B4J293 547 aa11.02□□□□□ -0.65
LINC00661-203ENST00000549131 CCDC160A6NGH7 325 aa11.02□□□□□ -0.65
LINC00661-203ENST00000549131 I3L2K1 104 aa11.02□□□□□ -0.65
LINC00661-203ENST00000549131 NUPL2O15504 423 aaKnown RBP11.02□□□□□ -0.65
LINC00661-203ENST00000549131 MT-CO2P00403 227 aa11.02□□□□□ -0.65
LINC00661-203ENST00000549131 IGHV3-48P01763 117 aa11.02□□□□□ -0.65
LINC00661-203ENST00000549131 MFAP4P55083 255 aa11.02□□□□□ -0.65
LINC00661-203ENST00000549131 RELQ04864 619 aaPredicted RBP11.02□□□□□ -0.65
LINC00661-203ENST00000549131 SURF2Q15527 256 aaPredicted RBP11.02□□□□□ -0.65
LINC00661-203ENST00000549131 ANKRD55Q3KP44 614 aa11.02□□□□□ -0.65
LINC00661-203ENST00000549131 OR51S1Q8NGJ8 323 aa11.02□□□□□ -0.65
LINC00661-203ENST00000549131 NAA60Q9H7X0 242 aa11.02□□□□□ -0.65
LINC00661-203ENST00000549131 ENY2Q9NPA8 101 aa11.02□□□□□ -0.65
LINC00661-203ENST00000549131 RSL24D1Q9UHA3 163 aaKnown RBP11.02□□□□□ -0.65
LINC00661-203ENST00000549131 A0A0G2JRQ6 117 aa11.01□□□□□ -0.65
LINC00661-203ENST00000549131 ANKRD20A5PA0PJZ0 165 aa11.01□□□□□ -0.65
LINC00661-203ENST00000549131 RBMY1BA6NDE4 496 aaKnown RBP11.01□□□□□ -0.65
LINC00661-203ENST00000549131 RBMY1EA6NEQ0 496 aaKnown RBP11.01□□□□□ -0.65
LINC00661-203ENST00000549131 GSTZ1O43708 216 aaPredicted RBP11.01□□□□□ -0.65
LINC00661-203ENST00000549131 GNG7O60262 68 aa11.01□□□□□ -0.65
LINC00661-203ENST00000549131 YIF1AO95070 293 aa11.01□□□□□ -0.65
LINC00661-203ENST00000549131 CTSGP08311 255 aa11.01□□□□□ -0.65
LINC00661-203ENST00000549131 RBMY1DP0C7P1 496 aaKnown RBP11.01□□□□□ -0.65
LINC00661-203ENST00000549131 FAM110AQ9BQ89 295 aa11.01□□□□□ -0.65
LINC00661-203ENST00000549131 RTBDNQ9BSG5 229 aaPredicted RBP11.01□□□□□ -0.65
LINC00661-203ENST00000549131 C5orf66Q9H5L9 145 aa11.01□□□□□ -0.65
LINC00661-203ENST00000549131 MCUBQ9NWR8 336 aa11.01□□□□□ -0.65
LINC00661-203ENST00000549131 RYR3Q15413 4870 aa11.01□□□□□ -0.65
LINC00661-203ENST00000549131 FABP12A6NFH5 140 aa11□□□□□ -0.65
LINC00661-203ENST00000549131 C15orf62A8K5M9 175 aa11□□□□□ -0.65
LINC00661-203ENST00000549131 LYL1P12980 280 aa11□□□□□ -0.65
LINC00661-203ENST00000549131 TNFSF8P32971 234 aa11□□□□□ -0.65
LINC00661-203ENST00000549131 ETV6P41212 452 aa11□□□□□ -0.65
LINC00661-203ENST00000549131 CASC10Q5T4H9 136 aa11□□□□□ -0.65
LINC00661-203ENST00000549131 LINC00322Q6ZN03 302 aaPredicted RBP11□□□□□ -0.65
LINC00661-203ENST00000549131 LHFPL5Q8TAF8 219 aa11□□□□□ -0.65
LINC00661-203ENST00000549131 RBPMSQ93062 196 aaKnown RBP11□□□□□ -0.65
LINC00661-203ENST00000549131 TXN2Q99757 166 aa11□□□□□ -0.65
LINC00661-203ENST00000549131 SPAG8Q99932 426 aaPredicted RBP11□□□□□ -0.65
LINC00661-203ENST00000549131 SCP2D1Q9UJQ7 156 aa11□□□□□ -0.65
LINC00661-203ENST00000549131 CRYM-AS1A6NIL9 109 aa10.99□□□□□ -0.65
LINC00661-203ENST00000549131 CDS2O95674 445 aa10.99□□□□□ -0.65
LINC00661-203ENST00000549131 FCGR2BP31994 310 aaPredicted RBP10.99□□□□□ -0.65
LINC00661-203ENST00000549131 SUB1P53999 127 aaKnown RBP eCLIP10.99□□□□□ -0.65
LINC00661-203ENST00000549131 DHODHQ02127 395 aa10.99□□□□□ -0.65
LINC00661-203ENST00000549131 TMEM268Q5VZI3 342 aa10.99□□□□□ -0.65
LINC00661-203ENST00000549131 LAMTOR1Q6IAA8 161 aa10.99□□□□□ -0.65
LINC00661-203ENST00000549131 FAM219AQ8IW50 185 aa10.99□□□□□ -0.65
LINC00661-203ENST00000549131 GLYATL2Q8WU03 294 aa10.99□□□□□ -0.65
LINC00661-203ENST00000549131 NXF2Q9GZY0 626 aaKnown RBP10.99□□□□□ -0.65
LINC00661-203ENST00000549131 HIPK2Q9H2X6 1198 aa10.99□□□□□ -0.65
LINC00661-203ENST00000549131 EDA2RQ9HAV5 297 aa10.99□□□□□ -0.65
LINC00661-203ENST00000549131 GPR132Q9UNW8 380 aa10.99□□□□□ -0.65
LINC00661-203ENST00000549131 IGHV3-49A0A0A0MS15 119 aa10.98□□□□□ -0.65
LINC00661-203ENST00000549131 INS-IGF2F8WCM5 200 aa10.98□□□□□ -0.65
LINC00661-203ENST00000549131 K7EMT4 169 aa10.98□□□□□ -0.65
LINC00661-203ENST00000549131 CORTO00230 105 aa10.98□□□□□ -0.65
LINC00661-203ENST00000549131 TSPAN4O14817 238 aa10.98□□□□□ -0.65
LINC00661-203ENST00000549131 RNASE2P10153 161 aaKnown RBP10.98□□□□□ -0.65
LINC00661-203ENST00000549131 OPRK1P41145 380 aa10.98□□□□□ -0.65
LINC00661-203ENST00000549131 NPBWR1P48145 328 aa10.98□□□□□ -0.65
LINC00661-203ENST00000549131 ZFAND6Q6FIF0 208 aa10.98□□□□□ -0.65
LINC00661-203ENST00000549131 SELENOHQ8IZQ5 122 aaKnown RBP10.98□□□□□ -0.65
LINC00661-203ENST00000549131 DUSP18Q8NEJ0 188 aa10.98□□□□□ -0.65
LINC00661-203ENST00000549131 CACNG5Q9UF02 275 aa10.98□□□□□ -0.65
LINC00661-203ENST00000549131 UBQLN2Q9UHD9 624 aa10.98□□□□□ -0.65
LINC00661-203ENST00000549131 IGHV7-4-1A0A0J9YVY3 117 aa10.97□□□□□ -0.65
LINC00661-203ENST00000549131 OR4C46A6NHA9 309 aa10.97□□□□□ -0.65
LINC00661-203ENST00000549131 SPCS3P61009 180 aa10.97□□□□□ -0.65
LINC00661-203ENST00000549131 PYDC2Q56P42 97 aa10.97□□□□□ -0.65
LINC00661-203ENST00000549131 Q6ZRM9 215 aa10.97□□□□□ -0.65
LINC00661-203ENST00000549131 TMEM116Q8NCL8 245 aa10.97□□□□□ -0.65
LINC00661-203ENST00000549131 TMEM230Q96A57 120 aa10.97□□□□□ -0.65
LINC00661-203ENST00000549131 ZNF414Q96IQ9 312 aa10.97□□□□□ -0.65
LINC00661-203ENST00000549131 SCGB3A2Q96PL1 93 aa10.97□□□□□ -0.65
LINC00661-203ENST00000549131 GINS3Q9BRX5 216 aa10.97□□□□□ -0.65
LINC00661-203ENST00000549131 GGTLC1Q9BX51 225 aa10.97□□□□□ -0.65
LINC00661-203ENST00000549131 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.97□□□□□ -0.65
LINC00661-203ENST00000549131 PRR13Q9NZ81 148 aa10.97□□□□□ -0.65
LINC00661-203ENST00000549131 SMPXQ9UHP9 88 aa10.97□□□□□ -0.65
LINC00661-203ENST00000549131 IGHV3OR16-13A0A075B7E8 117 aa10.96□□□□□ -0.65
LINC00661-203ENST00000549131 LOC102724200A0A096LPH7 203 aaPredicted RBP10.96□□□□□ -0.65
LINC00661-203ENST00000549131 IGHV3-74A0A0B4J1X5 117 aa10.96□□□□□ -0.65
LINC00661-203ENST00000549131 NXPH3O95157 252 aa10.96□□□□□ -0.65
LINC00661-203ENST00000549131 AKR1C4P17516 323 aa10.96□□□□□ -0.65
LINC00661-203ENST00000549131 S100A5P33763 92 aa10.96□□□□□ -0.65
LINC00661-203ENST00000549131 FAUP35544 74 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms