RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 NHLRC2Q8NBF2 726 aa18.91■□□□□ 0.62
NPAS3-206ENST00000548645 SLC25A33Q9BSK2 321 aa18.91■□□□□ 0.62
NPAS3-206ENST00000548645 ALKBH7Q9BT30 221 aaPredicted RBP18.91■□□□□ 0.62
NPAS3-206ENST00000548645 SPRR3Q9UBC9 169 aa18.91■□□□□ 0.62
NPAS3-206ENST00000548645 J3QR06 171 aa18.91■□□□□ 0.62
NPAS3-206ENST00000548645 IGLL1P15814 213 aa18.91■□□□□ 0.62
NPAS3-206ENST00000548645 MZT1Q08AG7 82 aa18.91■□□□□ 0.62
NPAS3-206ENST00000548645 MUC15Q8N387 334 aa18.91■□□□□ 0.62
NPAS3-206ENST00000548645 OR4F17Q8NGA8 305 aa18.91■□□□□ 0.62
NPAS3-206ENST00000548645 MYOD1P15172 320 aa18.9■□□□□ 0.62
NPAS3-206ENST00000548645 CDKN1BP46527 198 aa18.9■□□□□ 0.62
NPAS3-206ENST00000548645 FBLN7Q53RD9 439 aa18.9■□□□□ 0.62
NPAS3-206ENST00000548645 MOB3BQ86TA1 216 aa18.9■□□□□ 0.62
NPAS3-206ENST00000548645 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.9■□□□□ 0.62
NPAS3-206ENST00000548645 MBD6Q96DN6 1003 aa18.9■□□□□ 0.62
NPAS3-206ENST00000548645 GRAMD2BQ96HH9 432 aa18.9■□□□□ 0.62
NPAS3-206ENST00000548645 CALYQ9NYX4 217 aa18.9■□□□□ 0.62
NPAS3-206ENST00000548645 HOXC12P31275 282 aa18.9■□□□□ 0.62
NPAS3-206ENST00000548645 LYG1Q8N1E2 194 aa18.9■□□□□ 0.62
NPAS3-206ENST00000548645 MAFAQ8NHW3 353 aaPredicted RBP18.9■□□□□ 0.62
NPAS3-206ENST00000548645 MRPL32Q9BYC8 188 aaKnown RBP18.9■□□□□ 0.62
NPAS3-206ENST00000548645 TNFRSF19Q9NS68 423 aa18.9■□□□□ 0.62
NPAS3-206ENST00000548645 BDP1A6H8Y1 2624 aa18.9■□□□□ 0.62
NPAS3-206ENST00000548645 IGHV2-70DA0A0C4DH43 119 aa18.9■□□□□ 0.62
NPAS3-206ENST00000548645 AGFG2O95081 481 aa18.9■□□□□ 0.62
NPAS3-206ENST00000548645 IGKV3-15P01624 115 aa18.9■□□□□ 0.62
NPAS3-206ENST00000548645 RNASEKQ6P5S7 137 aaKnown RBP18.9■□□□□ 0.62
NPAS3-206ENST00000548645 SPRY4Q9C004 299 aa18.9■□□□□ 0.62
NPAS3-206ENST00000548645 ZNF355PQ9NSJ1 428 aa18.9■□□□□ 0.62
NPAS3-206ENST00000548645 ATP5IP56385 69 aaPredicted RBP18.89■□□□□ 0.61
NPAS3-206ENST00000548645 PRCDQ00LT1 54 aa18.89■□□□□ 0.61
NPAS3-206ENST00000548645 POU2AF1Q16633 256 aa18.89■□□□□ 0.61
NPAS3-206ENST00000548645 MDS2Q8NDY4 140 aa18.89■□□□□ 0.61
NPAS3-206ENST00000548645 NUP35Q8NFH5 326 aa18.89■□□□□ 0.61
NPAS3-206ENST00000548645 ADTRPQ96IZ2 230 aa18.89■□□□□ 0.61
NPAS3-206ENST00000548645 ZNF257Q9Y2Q1 563 aa18.89■□□□□ 0.61
NPAS3-206ENST00000548645 TTC28Q96AY4 2481 aa18.89■□□□□ 0.61
NPAS3-206ENST00000548645 SAA2P0DJI9 122 aaPredicted RBP18.89■□□□□ 0.61
NPAS3-206ENST00000548645 OR4C5Q8NGB2 326 aa18.89■□□□□ 0.61
NPAS3-206ENST00000548645 CHRDL1Q9BU40 450 aa18.89■□□□□ 0.61
NPAS3-206ENST00000548645 SRRM5B3KS81 715 aa18.88■□□□□ 0.61
NPAS3-206ENST00000548645 UBE2L3P68036 154 aaKnown RBP18.88■□□□□ 0.61
NPAS3-206ENST00000548645 COTL1Q14019 142 aa18.88■□□□□ 0.61
NPAS3-206ENST00000548645 LEAP2Q969E1 77 aa18.88■□□□□ 0.61
NPAS3-206ENST00000548645 LOC105371242A0A075B767 164 aa18.88■□□□□ 0.61
NPAS3-206ENST00000548645 C2orf70A6NJV1 201 aa18.88■□□□□ 0.61
NPAS3-206ENST00000548645 OR2J3O76001 311 aa18.88■□□□□ 0.61
NPAS3-206ENST00000548645 CT45A1Q5HYN5 189 aa18.88■□□□□ 0.61
NPAS3-206ENST00000548645 GDF5OSQ5U4N7 250 aa18.88■□□□□ 0.61
NPAS3-206ENST00000548645 Q6ZT83 130 aa18.88■□□□□ 0.61
NPAS3-206ENST00000548645 CT45A3Q8NHU0 189 aa18.88■□□□□ 0.61
NPAS3-206ENST00000548645 RPL8P62917 257 aaKnown RBP18.87■□□□□ 0.61
NPAS3-206ENST00000548645 TMEM105Q8N8V8 129 aa18.87■□□□□ 0.61
NPAS3-206ENST00000548645 RAB9BQ9NP90 201 aa18.87■□□□□ 0.61
NPAS3-206ENST00000548645 AMMECR1Q9Y4X0 333 aaPredicted RBP18.87■□□□□ 0.61
NPAS3-206ENST00000548645 CD46P15529 392 aa18.87■□□□□ 0.61
NPAS3-206ENST00000548645 LINC00479Q96M42 142 aa18.87■□□□□ 0.61
NPAS3-206ENST00000548645 AHCTF1Q8WYP5 2266 aa18.87■□□□□ 0.61
NPAS3-206ENST00000548645 ACP1P24666 158 aa18.87■□□□□ 0.61
NPAS3-206ENST00000548645 C2orf83Q53S99 150 aa18.87■□□□□ 0.61
NPAS3-206ENST00000548645 SNRNP40Q96DI7 357 aaKnown RBP18.87■□□□□ 0.61
NPAS3-206ENST00000548645 PEAR1Q5VY43 1037 aaPredicted RBP18.86■□□□□ 0.61
NPAS3-206ENST00000548645 NUDT10Q8NFP7 164 aa18.86■□□□□ 0.61
NPAS3-206ENST00000548645 OR9G1Q8NH87 305 aa18.86■□□□□ 0.61
NPAS3-206ENST00000548645 NUDT11Q96G61 164 aa18.86■□□□□ 0.61
NPAS3-206ENST00000548645 CLCF1Q9UBD9 225 aa18.86■□□□□ 0.61
NPAS3-206ENST00000548645 C9orf172C9J069 976 aa18.86■□□□□ 0.61
NPAS3-206ENST00000548645 ZNRF1Q8ND25 227 aa18.86■□□□□ 0.61
NPAS3-206ENST00000548645 FAM167A-AS1Q96KT0 104 aa18.86■□□□□ 0.61
NPAS3-206ENST00000548645 TMEM70Q9BUB7 260 aa18.86■□□□□ 0.61
NPAS3-206ENST00000548645 FRYQ5TBA9 3013 aa18.85■□□□□ 0.61
NPAS3-206ENST00000548645 C21orf140B9A014 251 aa18.85■□□□□ 0.61
NPAS3-206ENST00000548645 UTF1Q5T230 341 aa18.85■□□□□ 0.61
NPAS3-206ENST00000548645 FAM162BQ5T6X4 162 aa18.85■□□□□ 0.61
NPAS3-206ENST00000548645 OR2Z1Q8NG97 314 aa18.85■□□□□ 0.61
NPAS3-206ENST00000548645 ZNF596Q8TC21 504 aa18.85■□□□□ 0.61
NPAS3-206ENST00000548645 UPK2O00526 184 aa18.85■□□□□ 0.61
NPAS3-206ENST00000548645 SLC25A2Q9BXI2 301 aa18.85■□□□□ 0.61
NPAS3-206ENST00000548645 IGHV3OR15-7A0A075B7D8 119 aa18.84■□□□□ 0.61
NPAS3-206ENST00000548645 GCSAMQ8N6F7 178 aa18.84■□□□□ 0.61
NPAS3-206ENST00000548645 TRAV30A0A087WSZ9 112 aa18.84■□□□□ 0.61
NPAS3-206ENST00000548645 CECR9P0C854 216 aa18.84■□□□□ 0.61
NPAS3-206ENST00000548645 GPR6P46095 362 aaPredicted RBP18.84■□□□□ 0.61
NPAS3-206ENST00000548645 ASPHD1Q5U4P2 390 aa18.84■□□□□ 0.61
NPAS3-206ENST00000548645 MBNL2Q5VZF2 373 aaKnown RBP18.84■□□□□ 0.61
NPAS3-206ENST00000548645 ATP5L2Q7Z4Y8 100 aa18.84■□□□□ 0.61
NPAS3-206ENST00000548645 TRAV5A0A0B4J249 113 aa18.84■□□□□ 0.61
NPAS3-206ENST00000548645 CGB3P0DN86 165 aa18.84■□□□□ 0.61
NPAS3-206ENST00000548645 CGB7P0DN87 165 aa18.84■□□□□ 0.61
NPAS3-206ENST00000548645 HIST1H1EP10412 219 aaKnown RBP18.84■□□□□ 0.61
NPAS3-206ENST00000548645 RNFT1Q5M7Z0 435 aa18.84■□□□□ 0.61
NPAS3-206ENST00000548645 OR1L8Q8NGR8 309 aa18.84■□□□□ 0.61
NPAS3-206ENST00000548645 CEACAM8P31997 349 aaPredicted RBP18.83■□□□□ 0.61
NPAS3-206ENST00000548645 CAMPP49913 170 aa18.83■□□□□ 0.61
NPAS3-206ENST00000548645 CD69Q07108 199 aa18.83■□□□□ 0.61
NPAS3-206ENST00000548645 VAMP3Q15836 100 aa18.83■□□□□ 0.61
NPAS3-206ENST00000548645 C17orf58Q2M2W7 97 aa18.83■□□□□ 0.61
NPAS3-206ENST00000548645 LRRC10Q5BKY1 277 aa18.83■□□□□ 0.61
NPAS3-206ENST00000548645 SSBP4Q9BWG4 385 aaPredicted RBP18.83■□□□□ 0.61
NPAS3-206ENST00000548645 PEX7O00628 323 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms