RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 SLC25A33Q9BSK2 321 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 GAL3ST2Q9H3Q3 398 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 GNB4Q9HAV0 340 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 MSL2Q9HCI7 577 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 SEPSECSQ9HD40 501 aaKnown RBP5.28□□□□□ -1.56
SNHG1-225ENST00000545920 DNAJC4Q9NNZ3 241 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 ZNF71Q9NQZ8 489 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-225ENST00000545920 SLC35D1Q9NTN3 355 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 AURKAIP1Q9NWT8 199 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-225ENST00000545920 RNF7Q9UBF6 113 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 RPUSD1Q9UJJ7 312 aaKnown RBP5.28□□□□□ -1.56
SNHG1-225ENST00000545920 PROCRQ9UNN8 238 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 AMMECR1Q9Y4X0 333 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-225ENST00000545920 SLC25A15Q9Y619 301 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 LINC00312Q9Y6C7 94 aa5.28□□□□□ -1.56
SNHG1-225ENST00000545920 IGHV3-43A0A0B4J1X8 118 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 IGHV1-18A0A0C4DH31 117 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 MBD3L4A6NDZ8 208 aaPredicted RBP5.27□□□□□ -1.57
SNHG1-225ENST00000545920 MBD3L3A6NE82 208 aaPredicted RBP5.27□□□□□ -1.57
SNHG1-225ENST00000545920 MBD3L5A6NJ08 208 aaPredicted RBP5.27□□□□□ -1.57
SNHG1-225ENST00000545920 DEFB108AA8MXU0 73 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 CGAP01215 116 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 OR5AL1P0C617 328 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 IGHV3-43DP0DP04 118 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 ZNF25P17030 456 aaPredicted RBP5.27□□□□□ -1.57
SNHG1-225ENST00000545920 IGFBP2P18065 325 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 AMTP48728 403 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 EDDM3AQ14507 147 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 C3AR1Q16581 482 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 CLEC12BQ2HXU8 276 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 C17orf58Q2M2W7 97 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 KRTCAP3Q53RY4 240 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 SDK2Q58EX2 2172 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 CT45A1Q5HYN5 189 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 TEX36Q5VZQ5 186 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 STUMQ69YW2 141 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 COL27A1Q8IZC6 1860 aaPredicted RBP5.27□□□□□ -1.57
SNHG1-225ENST00000545920 OR8I2Q8N0Y5 310 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 LINC00311Q8N616 119 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 THAP8Q8NA92 274 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 OR2Z1Q8NG97 314 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 OR10X1Q8NGY0 326 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 CT45A3Q8NHU0 189 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 MBD3L2Q8NHZ7 208 aaPredicted RBP5.27□□□□□ -1.57
SNHG1-225ENST00000545920 ZNF596Q8TC21 504 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 SSMEM1Q8WWF3 244 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 MBD6Q96DN6 1003 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 TRIB1Q96RU8 372 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 TMEM208Q9BTX3 173 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 GFRA4Q9GZZ7 299 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 NRN1Q9NPD7 142 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 ZNF492Q9P255 531 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 RNF24Q9Y225 148 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 PI4KAP42356 2102 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 NCKAP5O14513 1909 aa5.27□□□□□ -1.57
SNHG1-225ENST00000545920 TRBV6-1A0A0K0K1D8 114 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 A0A1B0GW15 77 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 A0A1W2PS18 150 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 GRIFINA4D1Z8 144 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 DPRXA6NFQ7 191 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 NKX6-3A6NJ46 265 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 M0R296 226 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 CORTO00230 105 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 BMPR1BO00238 502 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 NUPR1O60356 82 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 OR7C2O60412 319 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 SAA2P0DJI9 122 aaPredicted RBP5.26□□□□□ -1.57
SNHG1-225ENST00000545920 IGLC2P0DOY2 106 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 IGLC3P0DOY3 106 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 RNASE2P10153 161 aaKnown RBP5.26□□□□□ -1.57
SNHG1-225ENST00000545920 CD59P13987 128 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 IRF2P14316 349 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 EGR1P18146 543 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 BMP5P22003 454 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 CRYBB3P26998 211 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 FABP6P51161 128 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 TBR1Q16650 682 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 RPL39P5Q59GN2 51 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 SPINK9Q5DT21 86 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 PVRIGQ6DKI7 326 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 ZNF833PQ6ZTB9 187 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 MIR17HGQ75NE6 70 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 TCF23Q7RTU1 214 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 S100A7AQ86SG5 101 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 PDPNQ86YL7 162 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 CNEP1R1Q8N9A8 125 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 ST6GALNAC3Q8NDV1 305 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 TMEM167AQ8TBQ9 72 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 VN1R17PQ8TDU5 208 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 TSKUQ8WUA8 353 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 C22orf15Q8WYQ4 148 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 CHCHD1Q96BP2 118 aaKnown RBP5.26□□□□□ -1.57
SNHG1-225ENST00000545920 STARD4Q96DR4 205 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 KRTAP4-5Q9BYR2 181 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 ZNF430Q9H8G1 570 aaPredicted RBP5.26□□□□□ -1.57
SNHG1-225ENST00000545920 LPAR2Q9HBW0 351 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 NDUFA4L2Q9NRX3 87 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 KLF12Q9Y4X4 402 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 PCSK5Q92824 1860 aa5.26□□□□□ -1.57
SNHG1-225ENST00000545920 TRAV9-2A0A087WT02 112 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms