RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 B3GALNT1O75752 331 aa12.06□□□□□ -0.48
DDX55-212ENST00000544738 PI3P19957 117 aa12.06□□□□□ -0.48
DDX55-212ENST00000544738 SNCAP37840 140 aa12.06□□□□□ -0.48
DDX55-212ENST00000544738 TAS2R19P59542 299 aa12.06□□□□□ -0.48
DDX55-212ENST00000544738 MRPS10P82664 201 aaKnown RBP12.06□□□□□ -0.48
DDX55-212ENST00000544738 SSBP1Q04837 148 aaKnown RBP12.06□□□□□ -0.48
DDX55-212ENST00000544738 GPR141Q7Z602 305 aa12.06□□□□□ -0.48
DDX55-212ENST00000544738 CCDC71LQ8N9Z2 235 aa12.06□□□□□ -0.48
DDX55-212ENST00000544738 TMEM229BQ8NBD8 167 aa12.06□□□□□ -0.48
DDX55-212ENST00000544738 MRPS26Q9BYN8 205 aaKnown RBP12.06□□□□□ -0.48
DDX55-212ENST00000544738 COPZ2Q9P299 210 aa12.06□□□□□ -0.48
DDX55-212ENST00000544738 GABARAPH6UMI1 98 aa12.05□□□□□ -0.48
DDX55-212ENST00000544738 RGS5O15539 181 aa12.05□□□□□ -0.48
DDX55-212ENST00000544738 RAB3DO95716 219 aa12.05□□□□□ -0.48
DDX55-212ENST00000544738 MT-CO2P00403 227 aa12.05□□□□□ -0.48
DDX55-212ENST00000544738 CD74P04233 296 aa12.05□□□□□ -0.48
DDX55-212ENST00000544738 AKR1C2P52895 323 aa12.05□□□□□ -0.48
DDX55-212ENST00000544738 TP53RKQ96S44 253 aa12.05□□□□□ -0.48
DDX55-212ENST00000544738 PDCD10Q9BUL8 212 aa12.05□□□□□ -0.48
DDX55-212ENST00000544738 SMPXQ9UHP9 88 aa12.05□□□□□ -0.48
DDX55-212ENST00000544738 ABCA13Q86UQ4 5058 aa12.04□□□□□ -0.48
DDX55-212ENST00000544738 IGHV3OR16-8A0A075B7F1 116 aa12.04□□□□□ -0.48
DDX55-212ENST00000544738 INS-IGF2F8WCM5 200 aa12.04□□□□□ -0.48
DDX55-212ENST00000544738 ZNF207O43670 478 aaKnown RBP12.04□□□□□ -0.48
DDX55-212ENST00000544738 GNG7O60262 68 aa12.04□□□□□ -0.48
DDX55-212ENST00000544738 YIF1AO95070 293 aa12.04□□□□□ -0.48
DDX55-212ENST00000544738 IGKV1-5P01602 117 aa12.04□□□□□ -0.48
DDX55-212ENST00000544738 NPBWR1P48145 328 aa12.04□□□□□ -0.48
DDX55-212ENST00000544738 PPP5CP53041 499 aa12.04□□□□□ -0.48
DDX55-212ENST00000544738 SUB1P53999 127 aaKnown RBP eCLIP12.04□□□□□ -0.48
DDX55-212ENST00000544738 APOC4P55056 127 aa12.04□□□□□ -0.48
DDX55-212ENST00000544738 TRIM16LQ309B1 348 aa12.04□□□□□ -0.48
DDX55-212ENST00000544738 SCGB2B2Q4G0G5 96 aa12.04□□□□□ -0.48
DDX55-212ENST00000544738 STEAP1BQ6NZ63 245 aa12.04□□□□□ -0.48
DDX55-212ENST00000544738 SLC35G3Q8N808 338 aa12.04□□□□□ -0.48
DDX55-212ENST00000544738 PINX1Q96BK5 328 aaKnown RBP12.04□□□□□ -0.48
DDX55-212ENST00000544738 OR10C1Q96KK4 312 aa12.04□□□□□ -0.48
DDX55-212ENST00000544738 NXF2Q9GZY0 626 aaKnown RBP12.04□□□□□ -0.48
DDX55-212ENST00000544738 VPS13DQ5THJ4 4388 aa12.04□□□□□ -0.48
DDX55-212ENST00000544738 A0A0B4J293 547 aa12.03□□□□□ -0.48
DDX55-212ENST00000544738 IGHV7-4-1A0A0J9YVY3 117 aa12.03□□□□□ -0.48
DDX55-212ENST00000544738 CORTO00230 105 aa12.03□□□□□ -0.48
DDX55-212ENST00000544738 UBE2CO00762 179 aa12.03□□□□□ -0.48
DDX55-212ENST00000544738 IFNA17P01571 189 aa12.03□□□□□ -0.48
DDX55-212ENST00000544738 CTSDP07339 412 aaPredicted RBP12.03□□□□□ -0.48
DDX55-212ENST00000544738 P0C879 139 aa12.03□□□□□ -0.48
DDX55-212ENST00000544738 ALDH3B2P48448 385 aa12.03□□□□□ -0.48
DDX55-212ENST00000544738 CMC4P56277 68 aaPredicted RBP12.03□□□□□ -0.48
DDX55-212ENST00000544738 MEF2DQ14814 521 aa12.03□□□□□ -0.48
DDX55-212ENST00000544738 IZUMO4Q1ZYL8 232 aa12.03□□□□□ -0.48
DDX55-212ENST00000544738 Q6ZWC4 215 aa12.03□□□□□ -0.48
DDX55-212ENST00000544738 TMEM116Q8NCL8 245 aa12.03□□□□□ -0.48
DDX55-212ENST00000544738 DUSP18Q8NEJ0 188 aa12.03□□□□□ -0.48
DDX55-212ENST00000544738 OR4D10Q8NGI6 311 aa12.03□□□□□ -0.48
DDX55-212ENST00000544738 RRNAD1Q96FB5 475 aaKnown RBP12.03□□□□□ -0.48
DDX55-212ENST00000544738 OVOL2Q9BRP0 275 aa12.03□□□□□ -0.48
DDX55-212ENST00000544738 RHPN1-AS1Q9BWJ2 59 aa12.03□□□□□ -0.48
DDX55-212ENST00000544738 MIXL1Q9H2W2 232 aa12.03□□□□□ -0.48
DDX55-212ENST00000544738 RABL2AQ9UBK7 228 aaPredicted RBP12.03□□□□□ -0.48
DDX55-212ENST00000544738 RABL2BQ9UNT1 228 aa12.03□□□□□ -0.48
DDX55-212ENST00000544738 TRAV14DV4A0A0A6YYC5 116 aa12.02□□□□□ -0.49
DDX55-212ENST00000544738 NUPR2A6NF83 97 aa12.02□□□□□ -0.49
DDX55-212ENST00000544738 CHEK1O14757 476 aa12.02□□□□□ -0.49
DDX55-212ENST00000544738 ST8SIA3O43173 380 aa12.02□□□□□ -0.49
DDX55-212ENST00000544738 CD5P06127 495 aa12.02□□□□□ -0.49
DDX55-212ENST00000544738 UCP1P25874 307 aa12.02□□□□□ -0.49
DDX55-212ENST00000544738 BMI1P35226 326 aa12.02□□□□□ -0.49
DDX55-212ENST00000544738 CEMP1Q6PRD7 247 aaPredicted RBP12.02□□□□□ -0.49
DDX55-212ENST00000544738 OR13C8Q8NGS7 320 aa12.02□□□□□ -0.49
DDX55-212ENST00000544738 MARCH1Q8TCQ1 289 aa12.02□□□□□ -0.49
DDX55-212ENST00000544738 GINS3Q9BRX5 216 aa12.02□□□□□ -0.49
DDX55-212ENST00000544738 ENY2Q9NPA8 101 aa12.02□□□□□ -0.49
DDX55-212ENST00000544738 UBQLN2Q9UHD9 624 aa12.02□□□□□ -0.49
DDX55-212ENST00000544738 TP53TG1Q9Y2A0 90 aa12.02□□□□□ -0.49
DDX55-212ENST00000544738 KIR2DL5BA0A0G2JN68 375 aa12.01□□□□□ -0.49
DDX55-212ENST00000544738 KIR2DL5BA0A0G2JPC4 375 aa12.01□□□□□ -0.49
DDX55-212ENST00000544738 CTDSP2O14595 271 aa12.01□□□□□ -0.49
DDX55-212ENST00000544738 IGHV3-48P01763 117 aa12.01□□□□□ -0.49
DDX55-212ENST00000544738 SURF2Q15527 256 aaPredicted RBP12.01□□□□□ -0.49
DDX55-212ENST00000544738 ODF3L2Q3SX64 289 aa12.01□□□□□ -0.49
DDX55-212ENST00000544738 SP6Q3SY56 376 aa12.01□□□□□ -0.49
DDX55-212ENST00000544738 SPINK9Q5DT21 86 aa12.01□□□□□ -0.49
DDX55-212ENST00000544738 WFDC3Q8IUB2 231 aa12.01□□□□□ -0.49
DDX55-212ENST00000544738 FAM219AQ8IW50 185 aa12.01□□□□□ -0.49
DDX55-212ENST00000544738 KIR2DL5AQ8N109 375 aa12.01□□□□□ -0.49
DDX55-212ENST00000544738 STPG3Q8N7X2 389 aa12.01□□□□□ -0.49
DDX55-212ENST00000544738 KIR2DL5BQ8NHK3 375 aa12.01□□□□□ -0.49
DDX55-212ENST00000544738 RNASE11Q8TAA1 199 aaKnown RBP12.01□□□□□ -0.49
DDX55-212ENST00000544738 SMIM4Q8WVI0 70 aa12.01□□□□□ -0.49
DDX55-212ENST00000544738 GALNT14Q96FL9 552 aa12.01□□□□□ -0.49
DDX55-212ENST00000544738 RNF2Q99496 336 aa12.01□□□□□ -0.49
DDX55-212ENST00000544738 C6orf62Q9GZU0 229 aaPredicted RBP12.01□□□□□ -0.49
DDX55-212ENST00000544738 C14orf166Q9Y224 244 aaKnown RBP12.01□□□□□ -0.49
DDX55-212ENST00000544738 DISC1C4P0D8 188 aa12□□□□□ -0.49
DDX55-212ENST00000544738 HOXA1P49639 335 aaPredicted RBP12□□□□□ -0.49
DDX55-212ENST00000544738 SPCS2Q15005 226 aa12□□□□□ -0.49
DDX55-212ENST00000544738 RAB2BQ8WUD1 216 aa12□□□□□ -0.49
DDX55-212ENST00000544738 DIRAS2Q96HU8 199 aa12□□□□□ -0.49
DDX55-212ENST00000544738 ZNF414Q96IQ9 312 aa12□□□□□ -0.49
DDX55-212ENST00000544738 BCL7BQ9BQE9 202 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms