RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 ZW10O43264 779 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 PSMG1O95456 288 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 NAPSAO96009 420 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 GP1BAP07359 652 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 OR13C7P0DN81 318 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 CCL3P10147 92 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 SYT1P21579 422 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 CD24P25063 80 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 PEBP1P30086 187 aaKnown RBP0.66□□□□□ -2.3
YBX3-214ENST00000544501 AGTR1P30556 359 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 HSPA9P38646 679 aaKnown RBP0.66□□□□□ -2.3
YBX3-214ENST00000544501 CRATP43155 626 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 ETV1P50549 477 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 STC1P52823 247 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 LINC00313P59037 77 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 RPL26P61254 145 aaKnown RBP0.66□□□□□ -2.3
YBX3-214ENST00000544501 DAD1P61803 113 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 C1DQ13901 141 aaKnown RBP0.66□□□□□ -2.3
YBX3-214ENST00000544501 UAP1Q16222 522 aaPredicted RBP0.66□□□□□ -2.3
YBX3-214ENST00000544501 CLEC12BQ2HXU8 276 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 PABPC1L2AQ5JQF8 200 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 FAM201AQ5SY85 155 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 XKRXQ6PP77 449 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 C2orf91Q6ZV80 131 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 CCDC112Q8NEF3 446 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 ATP6V1C2Q8NEY4 427 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 OR2D3Q8NGH3 330 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 OR52E4Q8NGH9 312 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 SMIM12Q96EX1 92 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 TMEM56Q96MV1 263 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 OR7D2Q96RA2 312 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 NAA38Q9BRA0 125 aaKnown RBP0.66□□□□□ -2.3
YBX3-214ENST00000544501 MIEN1Q9BRT3 115 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 BBS2Q9BXC9 721 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 NKX6-2Q9C056 277 aaPredicted RBP0.66□□□□□ -2.3
YBX3-214ENST00000544501 OR52A5Q9H2C5 316 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 LRTM1Q9HBL6 345 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 BABAM2Q9NXR7 383 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 CHMP5Q9NZZ3 219 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 DOK5Q9P104 306 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 RPL26L1Q9UNX3 145 aaKnown RBP0.66□□□□□ -2.3
YBX3-214ENST00000544501 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.66□□□□□ -2.3
YBX3-214ENST00000544501 USF3Q68DE3 2245 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 KIAA1549LQ6ZVL6 1849 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 DLG5Q8TDM6 1919 aa0.66□□□□□ -2.3
YBX3-214ENST00000544501 FCGBPQ9Y6R7 5405 aaPredicted RBP0.66□□□□□ -2.3
YBX3-214ENST00000544501 ZNF532Q9HCE3 1301 aa0.65□□□□□ -2.3
YBX3-214ENST00000544501 KMT2DO14686 5537 aa0.65□□□□□ -2.3
YBX3-214ENST00000544501 ARHGAP32A7KAX9 2087 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 MPDZO75970 2070 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 TRGV2A0A075B6R0 118 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 TLCD2A6NGC4 264 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 OR5K4A6NMS3 321 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 OR11H12B2RN74 326 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 COPEO14579 308 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 YKT6O15498 198 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 MPZL2O60487 215 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 ADAP1O75689 374 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 NDUFB2O95178 105 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 CRYBA1P05813 215 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 UCHL1P09936 223 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 ZNF728P0DKX0 622 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 PVALBP20472 110 aaPredicted RBP0.65□□□□□ -2.31
YBX3-214ENST00000544501 CFL1P23528 166 aaKnown RBP0.65□□□□□ -2.31
YBX3-214ENST00000544501 CRYBB3P26998 211 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 GRPRP30550 384 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 XCL1P47992 114 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 RAP1GDS1P52306 607 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 EMP2P54851 167 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 HSP90B2PQ58FF3 399 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 LHFPL1Q86WI0 220 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 BOD1L2Q8IYS8 172 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 SPERTQ8NA61 448 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 OR11H2Q8NH07 326 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 OR5J2Q8NH18 312 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 OR5AK3PQ8NH89 298 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 SPACA4Q8TDM5 124 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 RNASEH2CQ8TDP1 164 aaKnown RBP0.65□□□□□ -2.31
YBX3-214ENST00000544501 FGF13Q92913 245 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 ACBD6Q9BR61 282 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 TIMM21Q9BVV7 248 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 OR51B6Q9H340 312 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 TREM1Q9NP99 234 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 Q9Y3F1 56 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 MYH3P11055 1940 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 PTPRDP23468 1912 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 CR1P17927 2039 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 CACNA1CQ13936 2221 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 OBSL1O75147 1896 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 ANK1P16157 1881 aa0.65□□□□□ -2.31
YBX3-214ENST00000544501 NYNRINQ9P2P1 1898 aaKnown RBP0.65□□□□□ -2.31
YBX3-214ENST00000544501 RAD50Q92878 1312 aa0.64□□□□□ -2.31
YBX3-214ENST00000544501 NCKAP5O14513 1909 aa0.64□□□□□ -2.31
YBX3-214ENST00000544501 PLCE1Q9P212 2302 aa0.64□□□□□ -2.31
YBX3-214ENST00000544501 TRGV5A0A0B4J1U4 118 aa0.64□□□□□ -2.31
YBX3-214ENST00000544501 TRAV41A0A0B4J266 112 aa0.64□□□□□ -2.31
YBX3-214ENST00000544501 C19orf84I3L1E1 186 aa0.64□□□□□ -2.31
YBX3-214ENST00000544501 GOLGA8RI6L899 631 aa0.64□□□□□ -2.31
YBX3-214ENST00000544501 K7ERQ8 282 aa0.64□□□□□ -2.31
YBX3-214ENST00000544501 ARL6IP5O75915 188 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms