RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 SERF2P84101 59 aa10.91□□□□□ -0.66
HCFC2-202ENST00000544223 CLEC2AQ6UVW9 174 aa10.91□□□□□ -0.66
HCFC2-202ENST00000544223 PIMREGQ9BSJ6 248 aa10.91□□□□□ -0.66
HCFC2-202ENST00000544223 NPVFQ9HCQ7 196 aa10.91□□□□□ -0.66
HCFC2-202ENST00000544223 SEPSECSQ9HD40 501 aaKnown RBP10.91□□□□□ -0.66
HCFC2-202ENST00000544223 PRRC2AP48634 2157 aaKnown RBP10.91□□□□□ -0.66
HCFC2-202ENST00000544223 CNIH1O95406 144 aa10.91□□□□□ -0.66
HCFC2-202ENST00000544223 STPG3Q8N7X2 389 aa10.91□□□□□ -0.66
HCFC2-202ENST00000544223 CYB561D1Q8N8Q1 229 aa10.91□□□□□ -0.66
HCFC2-202ENST00000544223 LSM4Q9Y4Z0 139 aaKnown RBP10.91□□□□□ -0.66
HCFC2-202ENST00000544223 ACANP16112 2415 aa10.91□□□□□ -0.66
HCFC2-202ENST00000544223 FOXH1O75593 365 aa10.9□□□□□ -0.66
HCFC2-202ENST00000544223 RPL27AP46776 148 aaKnown RBP10.9□□□□□ -0.66
HCFC2-202ENST00000544223 COMPP49747 757 aaPredicted RBP10.9□□□□□ -0.66
HCFC2-202ENST00000544223 UBE2G2P60604 165 aa10.9□□□□□ -0.66
HCFC2-202ENST00000544223 ERHP84090 104 aaKnown RBP10.9□□□□□ -0.66
HCFC2-202ENST00000544223 ZNF90Q03938 601 aa10.9□□□□□ -0.66
HCFC2-202ENST00000544223 BSXQ3C1V8 233 aa10.9□□□□□ -0.66
HCFC2-202ENST00000544223 SMUG1Q53HV7 270 aa10.9□□□□□ -0.66
HCFC2-202ENST00000544223 TEPPQ6URK8 271 aa10.9□□□□□ -0.66
HCFC2-202ENST00000544223 ABHD5Q8WTS1 349 aa10.9□□□□□ -0.66
HCFC2-202ENST00000544223 NKX6-2Q9C056 277 aaPredicted RBP10.9□□□□□ -0.66
HCFC2-202ENST00000544223 DOK5Q9P104 306 aa10.9□□□□□ -0.66
HCFC2-202ENST00000544223 KPTNQ9Y664 436 aa10.9□□□□□ -0.66
HCFC2-202ENST00000544223 PDZD2O15018 2839 aa10.9□□□□□ -0.66
HCFC2-202ENST00000544223 CENPVL3A0A0U1RRI6 287 aa10.9□□□□□ -0.67
HCFC2-202ENST00000544223 TEX22C9J3V5 150 aa10.9□□□□□ -0.67
HCFC2-202ENST00000544223 OR10J1P30954 320 aa10.9□□□□□ -0.67
HCFC2-202ENST00000544223 B2MP61769 119 aa10.9□□□□□ -0.67
HCFC2-202ENST00000544223 SRSF12Q8WXF0 261 aaKnown RBP10.9□□□□□ -0.67
HCFC2-202ENST00000544223 NPIPB3Q92617 1050 aa10.9□□□□□ -0.67
HCFC2-202ENST00000544223 PARD6GQ9BYG4 376 aaPredicted RBP10.9□□□□□ -0.67
HCFC2-202ENST00000544223 UNC79Q9P2D8 2635 aa10.89□□□□□ -0.67
HCFC2-202ENST00000544223 TSPAN4O14817 238 aa10.89□□□□□ -0.67
HCFC2-202ENST00000544223 SCAF4O95104 1147 aaKnown RBP10.89□□□□□ -0.67
HCFC2-202ENST00000544223 DLK1P80370 383 aa10.89□□□□□ -0.67
HCFC2-202ENST00000544223 C2orf83Q53S99 150 aa10.89□□□□□ -0.67
HCFC2-202ENST00000544223 CENPVQ7Z7K6 275 aaPredicted RBP10.89□□□□□ -0.67
HCFC2-202ENST00000544223 TMEM219Q86XT9 240 aa10.89□□□□□ -0.67
HCFC2-202ENST00000544223 C22orf15Q8WYQ4 148 aa10.89□□□□□ -0.67
HCFC2-202ENST00000544223 PUS1Q9Y606 427 aaKnown RBP eCLIP10.89□□□□□ -0.67
HCFC2-202ENST00000544223 TRAV40A0A0B4J280 105 aa10.89□□□□□ -0.67
HCFC2-202ENST00000544223 MOSP00540 346 aa10.89□□□□□ -0.67
HCFC2-202ENST00000544223 IGHV4-38-2P0DP08 117 aa10.89□□□□□ -0.67
HCFC2-202ENST00000544223 NDPQ00604 133 aa10.89□□□□□ -0.67
HCFC2-202ENST00000544223 PEA15Q15121 130 aa10.89□□□□□ -0.67
HCFC2-202ENST00000544223 MMD2Q8IY49 270 aa10.89□□□□□ -0.67
HCFC2-202ENST00000544223 TEX45Q8NA69 505 aa10.89□□□□□ -0.67
HCFC2-202ENST00000544223 SLC25A33Q9BSK2 321 aa10.89□□□□□ -0.67
HCFC2-202ENST00000544223 SEC11CQ9BY50 192 aa10.89□□□□□ -0.67
HCFC2-202ENST00000544223 KIAA1456Q9P272 454 aa10.89□□□□□ -0.67
HCFC2-202ENST00000544223 NUDT19A8MXV4 375 aa10.88□□□□□ -0.67
HCFC2-202ENST00000544223 C17orf112F2Z3M2 114 aa10.88□□□□□ -0.67
HCFC2-202ENST00000544223 NBR2O15453 112 aa10.88□□□□□ -0.67
HCFC2-202ENST00000544223 HSPB1P04792 205 aaKnown RBP10.88□□□□□ -0.67
HCFC2-202ENST00000544223 CEACAM3P40198 252 aa10.88□□□□□ -0.67
HCFC2-202ENST00000544223 CD69Q07108 199 aa10.88□□□□□ -0.67
HCFC2-202ENST00000544223 C10orf91Q5T1B1 145 aa10.88□□□□□ -0.67
HCFC2-202ENST00000544223 SLC16A13Q7RTY0 426 aa10.88□□□□□ -0.67
HCFC2-202ENST00000544223 TIMM9Q9Y5J7 89 aa10.88□□□□□ -0.67
HCFC2-202ENST00000544223 LOC105371267A0A1B0GV96 52 aa10.88□□□□□ -0.67
HCFC2-202ENST00000544223 VWC2LB2RUY7 222 aa10.88□□□□□ -0.67
HCFC2-202ENST00000544223 AVPP01185 164 aa10.88□□□□□ -0.67
HCFC2-202ENST00000544223 CDC34P49427 236 aaPredicted RBP10.88□□□□□ -0.67
HCFC2-202ENST00000544223 MORN5Q5VZ52 161 aa10.88□□□□□ -0.67
HCFC2-202ENST00000544223 OR4A5Q8NH83 315 aa10.88□□□□□ -0.67
HCFC2-202ENST00000544223 PBDC1Q9BVG4 233 aa10.88□□□□□ -0.67
HCFC2-202ENST00000544223 SLC35B3Q9H1N7 401 aa10.88□□□□□ -0.67
HCFC2-202ENST00000544223 NOTCH2Q04721 2471 aa10.88□□□□□ -0.67
HCFC2-202ENST00000544223 SRP19P09132 144 aaKnown RBP10.87□□□□□ -0.67
HCFC2-202ENST00000544223 LINC00869P0C866 280 aa10.87□□□□□ -0.67
HCFC2-202ENST00000544223 SVBPQ8N300 66 aa10.87□□□□□ -0.67
HCFC2-202ENST00000544223 MBD3L1Q8WWY6 194 aa10.87□□□□□ -0.67
HCFC2-202ENST00000544223 UHRF2Q96PU4 802 aa10.87□□□□□ -0.67
HCFC2-202ENST00000544223 LINC01548A6NM66 108 aa10.87□□□□□ -0.67
HCFC2-202ENST00000544223 DNASE2O00115 360 aaPredicted RBP10.87□□□□□ -0.67
HCFC2-202ENST00000544223 RND2P52198 227 aa10.87□□□□□ -0.67
HCFC2-202ENST00000544223 CLEC12BQ2HXU8 276 aa10.87□□□□□ -0.67
HCFC2-202ENST00000544223 C1orf122Q6ZSJ8 110 aa10.87□□□□□ -0.67
HCFC2-202ENST00000544223 UNKLQ9H9P5 680 aaKnown RBP10.87□□□□□ -0.67
HCFC2-202ENST00000544223 CARHSP1Q9Y2V2 147 aaKnown RBP10.87□□□□□ -0.67
HCFC2-202ENST00000544223 LOC102723971A0A1B0GUV8 181 aa10.86□□□□□ -0.67
HCFC2-202ENST00000544223 A0A1W2PN81 502 aa10.86□□□□□ -0.67
HCFC2-202ENST00000544223 M0R036 132 aa10.86□□□□□ -0.67
HCFC2-202ENST00000544223 ARL14EPLP0DKL9 152 aa10.86□□□□□ -0.67
HCFC2-202ENST00000544223 TMEM11P17152 192 aa10.86□□□□□ -0.67
HCFC2-202ENST00000544223 CHRNA7P36544 502 aa10.86□□□□□ -0.67
HCFC2-202ENST00000544223 UBE2E1P51965 193 aa10.86□□□□□ -0.67
HCFC2-202ENST00000544223 FXYD3Q14802 87 aa10.86□□□□□ -0.67
HCFC2-202ENST00000544223 MIR17HGQ75NE6 70 aa10.86□□□□□ -0.67
HCFC2-202ENST00000544223 KIR3DL3Q8N743 410 aa10.86□□□□□ -0.67
HCFC2-202ENST00000544223 ACTR3CQ9C0K3 210 aaPredicted RBP10.86□□□□□ -0.67
HCFC2-202ENST00000544223 TRAV5A0A0B4J249 113 aa10.86□□□□□ -0.67
HCFC2-202ENST00000544223 CTXND1A0A1B0GTU2 59 aa10.86□□□□□ -0.67
HCFC2-202ENST00000544223 A0A1W2PPV4 95 aa10.86□□□□□ -0.67
HCFC2-202ENST00000544223 NPFFO15130 113 aa10.86□□□□□ -0.67
HCFC2-202ENST00000544223 PAGE4O60829 102 aa10.86□□□□□ -0.67
HCFC2-202ENST00000544223 PRB4P10163 310 aaPredicted RBP10.86□□□□□ -0.67
HCFC2-202ENST00000544223 BCL2P10415 239 aa10.86□□□□□ -0.67
HCFC2-202ENST00000544223 ACOT6Q3I5F7 207 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms