RNA–Protein interactions for RNA: ENST00000544004.1

AP000439.1-201, humanhuman

TSL 4 BASIC

Gene AP000439.1, Length 581 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.1-201ENST00000544004 ZNF66Q6ZN08 573 aa8.03□□□□□ -1.12
AP000439.1-201ENST00000544004 LGALS14Q8TCE9 139 aa8.03□□□□□ -1.12
AP000439.1-201ENST00000544004 VSIRQ9H7M9 311 aa8.03□□□□□ -1.12
AP000439.1-201ENST00000544004 RABAC1Q9UI14 185 aa8.03□□□□□ -1.12
AP000439.1-201ENST00000544004 F11RQ9Y624 299 aaKnown RBP8.03□□□□□ -1.12
AP000439.1-201ENST00000544004 TMEM235A6NFC5 223 aa8.02□□□□□ -1.13
AP000439.1-201ENST00000544004 TNFSF12O43508 249 aa8.02□□□□□ -1.13
AP000439.1-201ENST00000544004 SPART-AS1P0CW21 52 aa8.02□□□□□ -1.13
AP000439.1-201ENST00000544004 KCTD21Q4G0X4 260 aa8.02□□□□□ -1.13
AP000439.1-201ENST00000544004 ACTL10Q5JWF8 245 aa8.02□□□□□ -1.13
AP000439.1-201ENST00000544004 THOC7Q6I9Y2 204 aaKnown RBP8.02□□□□□ -1.13
AP000439.1-201ENST00000544004 HSD17B13Q7Z5P4 300 aaPredicted RBP8.02□□□□□ -1.13
AP000439.1-201ENST00000544004 SPAG16Q8N0X2 631 aa8.02□□□□□ -1.13
AP000439.1-201ENST00000544004 NUDCD2Q8WVJ2 157 aa8.02□□□□□ -1.13
AP000439.1-201ENST00000544004 TMED3Q9Y3Q3 217 aa8.02□□□□□ -1.13
AP000439.1-201ENST00000544004 MYCBP2O75592 4640 aa8.02□□□□□ -1.13
AP000439.1-201ENST00000544004 TRAV18A0A075B6X5 111 aa8.01□□□□□ -1.13
AP000439.1-201ENST00000544004 NBDYA0A0U1RRE5 68 aa8.01□□□□□ -1.13
AP000439.1-201ENST00000544004 TEX50A0A1B0GTY4 177 aa8.01□□□□□ -1.13
AP000439.1-201ENST00000544004 SCGNO76038 276 aa8.01□□□□□ -1.13
AP000439.1-201ENST00000544004 CTXN2P0C2S0 81 aa8.01□□□□□ -1.13
AP000439.1-201ENST00000544004 HTN3P15516 51 aa8.01□□□□□ -1.13
AP000439.1-201ENST00000544004 NQO2P16083 231 aa8.01□□□□□ -1.13
AP000439.1-201ENST00000544004 DTYMKP23919 212 aa8.01□□□□□ -1.13
AP000439.1-201ENST00000544004 EMP1P54849 157 aa8.01□□□□□ -1.13
AP000439.1-201ENST00000544004 TAS2R31P59538 309 aa8.01□□□□□ -1.13
AP000439.1-201ENST00000544004 POU2AF1Q16633 256 aa8.01□□□□□ -1.13
AP000439.1-201ENST00000544004 DMBX1Q8NFW5 382 aa8.01□□□□□ -1.13
AP000439.1-201ENST00000544004 OR5H6Q8NGV6 325 aa8.01□□□□□ -1.13
AP000439.1-201ENST00000544004 GINS3Q9BRX5 216 aa8.01□□□□□ -1.13
AP000439.1-201ENST00000544004 HINT2Q9BX68 163 aa8.01□□□□□ -1.13
AP000439.1-201ENST00000544004 NXF2Q9GZY0 626 aaKnown RBP8.01□□□□□ -1.13
AP000439.1-201ENST00000544004 VCX3AQ9NNX9 186 aa8.01□□□□□ -1.13
AP000439.1-201ENST00000544004 TMEM140Q9NV12 185 aa8.01□□□□□ -1.13
AP000439.1-201ENST00000544004 RHBDL2Q9NX52 303 aa8.01□□□□□ -1.13
AP000439.1-201ENST00000544004 K7EQG2 157 aa8□□□□□ -1.13
AP000439.1-201ENST00000544004 HPRT1P00492 218 aa8□□□□□ -1.13
AP000439.1-201ENST00000544004 ZNF688P0C7X2 276 aa8□□□□□ -1.13
AP000439.1-201ENST00000544004 FAM3BP58499 235 aaPredicted RBP8□□□□□ -1.13
AP000439.1-201ENST00000544004 KRTAP10-2P60368 255 aa8□□□□□ -1.13
AP000439.1-201ENST00000544004 LSM3P62310 102 aaKnown RBP8□□□□□ -1.13
AP000439.1-201ENST00000544004 TOMM20LQ6UXN7 152 aa8□□□□□ -1.13
AP000439.1-201ENST00000544004 STXBP6Q8NFX7 210 aa8□□□□□ -1.13
AP000439.1-201ENST00000544004 TSPAN14Q8NG11 270 aa8□□□□□ -1.13
AP000439.1-201ENST00000544004 OR1L8Q8NGR8 309 aa8□□□□□ -1.13
AP000439.1-201ENST00000544004 LSM10Q969L4 123 aaKnown RBP8□□□□□ -1.13
AP000439.1-201ENST00000544004 SLC25A46Q96AG3 418 aa8□□□□□ -1.13
AP000439.1-201ENST00000544004 GRAMD2BQ96HH9 432 aa8□□□□□ -1.13
AP000439.1-201ENST00000544004 DCSTAMPQ9H295 470 aa8□□□□□ -1.13
AP000439.1-201ENST00000544004 XCL2Q9UBD3 114 aa8□□□□□ -1.13
AP000439.1-201ENST00000544004 A0A087WXM4 84 aa7.99□□□□□ -1.13
AP000439.1-201ENST00000544004 SULT1C2O00338 296 aa7.99□□□□□ -1.13
AP000439.1-201ENST00000544004 RBFOX2O43251 390 aaKnown RBP eCLIP7.99□□□□□ -1.13
AP000439.1-201ENST00000544004 SSX5O60225 188 aa7.99□□□□□ -1.13
AP000439.1-201ENST00000544004 FCER2P06734 321 aa7.99□□□□□ -1.13
AP000439.1-201ENST00000544004 FGF2P09038 288 aa7.99□□□□□ -1.13
AP000439.1-201ENST00000544004 MFAP4P55083 255 aa7.99□□□□□ -1.13
AP000439.1-201ENST00000544004 ARPC4P59998 168 aa7.99□□□□□ -1.13
AP000439.1-201ENST00000544004 TMEM88Q6PEY1 159 aa7.99□□□□□ -1.13
AP000439.1-201ENST00000544004 CNIH2Q6PI25 160 aa7.99□□□□□ -1.13
AP000439.1-201ENST00000544004 NIPSNAP3BQ9BS92 247 aa7.99□□□□□ -1.13
AP000439.1-201ENST00000544004 ATG101Q9BSB4 218 aa7.99□□□□□ -1.13
AP000439.1-201ENST00000544004 C1QTNF4Q9BXJ3 329 aa7.99□□□□□ -1.13
AP000439.1-201ENST00000544004 DIABLOQ9NR28 239 aa7.99□□□□□ -1.13
AP000439.1-201ENST00000544004 CCL28Q9NRJ3 127 aa7.99□□□□□ -1.13
AP000439.1-201ENST00000544004 NDUFA4L2Q9NRX3 87 aa7.99□□□□□ -1.13
AP000439.1-201ENST00000544004 ANXA10Q9UJ72 324 aa7.99□□□□□ -1.13
AP000439.1-201ENST00000544004 GNG7O60262 68 aa7.98□□□□□ -1.13
AP000439.1-201ENST00000544004 TNFAIP8O95379 198 aa7.98□□□□□ -1.13
AP000439.1-201ENST00000544004 IGHV3-48P01763 117 aa7.98□□□□□ -1.13
AP000439.1-201ENST00000544004 TGFBR1P36897 503 aa7.98□□□□□ -1.13
AP000439.1-201ENST00000544004 SECTM1Q8WVN6 248 aa7.98□□□□□ -1.13
AP000439.1-201ENST00000544004 SLC25A38Q96DW6 304 aa7.98□□□□□ -1.13
AP000439.1-201ENST00000544004 C18orf15Q96N68 181 aa7.98□□□□□ -1.13
AP000439.1-201ENST00000544004 RAB40CQ96S21 281 aa7.98□□□□□ -1.13
AP000439.1-201ENST00000544004 TXN2Q99757 166 aa7.98□□□□□ -1.13
AP000439.1-201ENST00000544004 TMEM231Q9H6L2 316 aa7.98□□□□□ -1.13
AP000439.1-201ENST00000544004 DKK2Q9UBU2 259 aa7.98□□□□□ -1.13
AP000439.1-201ENST00000544004 TMEM189A5PLL7 270 aa7.97□□□□□ -1.13
AP000439.1-201ENST00000544004 MEIS3P1A6NDR6 274 aa7.97□□□□□ -1.13
AP000439.1-201ENST00000544004 I3L2K1 104 aa7.97□□□□□ -1.13
AP000439.1-201ENST00000544004 PTHLHP12272 177 aa7.97□□□□□ -1.13
AP000439.1-201ENST00000544004 RPS19P39019 145 aaKnown RBP7.97□□□□□ -1.13
AP000439.1-201ENST00000544004 SCAND1P57086 179 aa7.97□□□□□ -1.13
AP000439.1-201ENST00000544004 NUTF2P61970 127 aaKnown RBP7.97□□□□□ -1.13
AP000439.1-201ENST00000544004 CATR1Q13166 79 aa7.97□□□□□ -1.13
AP000439.1-201ENST00000544004 FAM222AQ5U5X8 452 aa7.97□□□□□ -1.13
AP000439.1-201ENST00000544004 Q5VSD8 79 aa7.97□□□□□ -1.13
AP000439.1-201ENST00000544004 BEST4Q8NFU0 473 aa7.97□□□□□ -1.13
AP000439.1-201ENST00000544004 ZNRF2Q8NHG8 242 aa7.97□□□□□ -1.13
AP000439.1-201ENST00000544004 DCANP1Q8TF63 244 aa7.97□□□□□ -1.13
AP000439.1-201ENST00000544004 YIPF6Q96EC8 236 aa7.97□□□□□ -1.13
AP000439.1-201ENST00000544004 MISP3Q96FF7 219 aa7.97□□□□□ -1.13
AP000439.1-201ENST00000544004 S100A16Q96FQ6 103 aaKnown RBP7.97□□□□□ -1.13
AP000439.1-201ENST00000544004 NEU1Q99519 415 aa7.97□□□□□ -1.13
AP000439.1-201ENST00000544004 AUNIPQ9H7T9 357 aa7.97□□□□□ -1.13
AP000439.1-201ENST00000544004 ZFAND3Q9H8U3 227 aa7.97□□□□□ -1.13
AP000439.1-201ENST00000544004 PLEKHA2Q9HB19 425 aa7.97□□□□□ -1.13
AP000439.1-201ENST00000544004 PUS1Q9Y606 427 aaKnown RBP eCLIP7.97□□□□□ -1.13
AP000439.1-201ENST00000544004 A0A0A6YYH2 397 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms