RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 PEF1Q9UBV8 284 aaKnown RBP4.9□□□□□ -1.63
LTBR-212ENST00000543542 HSPB7Q9UBY9 170 aa4.9□□□□□ -1.63
LTBR-212ENST00000543542 LSM5Q9Y4Y9 91 aaKnown RBP4.9□□□□□ -1.63
LTBR-212ENST00000543542 COL6A5A8TX70 2615 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 TRBV7-1A0A0A6YYK4 115 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 TRBV9A0A0B4J1U6 114 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 RPS10-NUDT3A0A1W2PQS6 291 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 MFSD2BA6NFX1 497 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 ADARB2-AS1A8MUL3 147 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 MPTX1A8MV57 137 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 I3L521 148 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 SSSCA1O60232 199 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 SCGB2A1O75556 95 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 MT-CO2P00403 227 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 IGHV3-48P01763 117 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 IFNA4P05014 189 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 RNASE2P10153 161 aaKnown RBP4.89□□□□□ -1.63
LTBR-212ENST00000543542 PVALBP20472 110 aaPredicted RBP4.89□□□□□ -1.63
LTBR-212ENST00000543542 ZP3P21754 424 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 NPY1RP25929 384 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 ARL3P36405 182 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 BCAP31P51572 246 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 SLURP1P55000 103 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 S100A10P60903 97 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 POLR2GP62487 172 aaKnown RBP eCLIP4.89□□□□□ -1.63
LTBR-212ENST00000543542 KIAA0141Q14154 515 aaPredicted RBP4.89□□□□□ -1.63
LTBR-212ENST00000543542 TATDN3Q17R31 274 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 RPEL1Q2QD12 228 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 SPANXN5Q5MJ07 72 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 ZNF343Q6P1L6 599 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 ACSM6Q6P461 480 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 ETV3LQ6ZN32 361 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 ZNF114Q8NC26 417 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 VN1R17PQ8TDU5 208 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 RAX2Q96IS3 184 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 C2orf50Q96LR7 162 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 FANCD2OSQ96PS1 177 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 ZC4H2Q9NQZ6 224 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 C21orf62Q9NYP8 219 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 PSENENQ9NZ42 101 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 MGAT4CQ9UBM8 478 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 ALG5Q9Y673 324 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 U3KQ87 197 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 ANK2Q01484 3957 aa4.89□□□□□ -1.63
LTBR-212ENST00000543542 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.88□□□□□ -1.63
LTBR-212ENST00000543542 OR2T8A6NH00 312 aa4.88□□□□□ -1.63
LTBR-212ENST00000543542 PPP5D1E7EU14 171 aa4.88□□□□□ -1.63
LTBR-212ENST00000543542 INS-IGF2F8WCM5 200 aa4.88□□□□□ -1.63
LTBR-212ENST00000543542 H3BP45 60 aa4.88□□□□□ -1.63
LTBR-212ENST00000543542 GNG7O60262 68 aa4.88□□□□□ -1.63
LTBR-212ENST00000543542 GGCTO75223 188 aaKnown RBP4.88□□□□□ -1.63
LTBR-212ENST00000543542 PITX3O75364 302 aa4.88□□□□□ -1.63
LTBR-212ENST00000543542 SIX6O95475 246 aa4.88□□□□□ -1.63
LTBR-212ENST00000543542 LY86O95711 162 aa4.88□□□□□ -1.63
LTBR-212ENST00000543542 RLN2P04090 185 aa4.88□□□□□ -1.63
LTBR-212ENST00000543542 CLEC3BP05452 202 aa4.88□□□□□ -1.63
LTBR-212ENST00000543542 GPR183P32249 361 aa4.88□□□□□ -1.63
LTBR-212ENST00000543542 NPBWR1P48145 328 aa4.88□□□□□ -1.63
LTBR-212ENST00000543542 MFAP2P55001 183 aa4.88□□□□□ -1.63
LTBR-212ENST00000543542 MFAP4P55083 255 aa4.88□□□□□ -1.63
LTBR-212ENST00000543542 RUNX1Q01196 453 aa4.88□□□□□ -1.63
LTBR-212ENST00000543542 AARDQ4LEZ3 155 aa4.88□□□□□ -1.63
LTBR-212ENST00000543542 PDLIM3Q53GG5 364 aaPredicted RBP4.88□□□□□ -1.63
LTBR-212ENST00000543542 C2orf83Q53S99 150 aa4.88□□□□□ -1.63
LTBR-212ENST00000543542 PRR31Q5SQ13 230 aa4.88□□□□□ -1.63
LTBR-212ENST00000543542 ETFRF1Q6IPR1 90 aa4.88□□□□□ -1.63
LTBR-212ENST00000543542 OR4D5Q8NGN0 318 aa4.88□□□□□ -1.63
LTBR-212ENST00000543542 SCARB1Q8WTV0 552 aa4.88□□□□□ -1.63
LTBR-212ENST00000543542 MED28Q9H204 178 aa4.88□□□□□ -1.63
LTBR-212ENST00000543542 GAR1Q9NY12 217 aaKnown RBP4.88□□□□□ -1.63
LTBR-212ENST00000543542 RCL1Q9Y2P8 373 aaKnown RBP4.88□□□□□ -1.63
LTBR-212ENST00000543542 STRAPQ9Y3F4 350 aaKnown RBP4.88□□□□□ -1.63
LTBR-212ENST00000543542 TNCP24821 2201 aa4.88□□□□□ -1.63
LTBR-212ENST00000543542 IGHV3-35A0A0C4DH35 117 aa4.87□□□□□ -1.63
LTBR-212ENST00000543542 ZNF320A2RRD8 509 aa4.87□□□□□ -1.63
LTBR-212ENST00000543542 I3L2K1 104 aa4.87□□□□□ -1.63
LTBR-212ENST00000543542 K7EIM0 57 aa4.87□□□□□ -1.63
LTBR-212ENST00000543542 OVOL1O14753 267 aa4.87□□□□□ -1.63
LTBR-212ENST00000543542 NUPL2O15504 423 aaKnown RBP4.87□□□□□ -1.63
LTBR-212ENST00000543542 TGOLN2O43493 480 aa4.87□□□□□ -1.63
LTBR-212ENST00000543542 YIF1AO95070 293 aa4.87□□□□□ -1.63
LTBR-212ENST00000543542 OR2C1O95371 312 aa4.87□□□□□ -1.63
LTBR-212ENST00000543542 TRBV12-3P01733 135 aa4.87□□□□□ -1.63
LTBR-212ENST00000543542 MBPP02686 304 aaPredicted RBP4.87□□□□□ -1.63
LTBR-212ENST00000543542 HOXD3P31249 432 aaPredicted RBP4.87□□□□□ -1.63
LTBR-212ENST00000543542 ATP5IP56385 69 aaPredicted RBP4.87□□□□□ -1.63
LTBR-212ENST00000543542 SYNJ2BPP57105 145 aa4.87□□□□□ -1.63
LTBR-212ENST00000543542 CYCSP99999 105 aaKnown RBP4.87□□□□□ -1.63
LTBR-212ENST00000543542 ID3Q02535 119 aa4.87□□□□□ -1.63
LTBR-212ENST00000543542 LRRC37A5PQ49AS3 106 aa4.87□□□□□ -1.63
LTBR-212ENST00000543542 FAM106AQ4KMX7 169 aa4.87□□□□□ -1.63
LTBR-212ENST00000543542 OR8G2PQ6IF36 304 aa4.87□□□□□ -1.63
LTBR-212ENST00000543542 C11orf87Q6NUJ2 197 aa4.87□□□□□ -1.63
LTBR-212ENST00000543542 LINC00482Q8N8I6 264 aa4.87□□□□□ -1.63
LTBR-212ENST00000543542 ZNF502Q8TBZ5 544 aa4.87□□□□□ -1.63
LTBR-212ENST00000543542 RNASEH2CQ8TDP1 164 aaKnown RBP4.87□□□□□ -1.63
LTBR-212ENST00000543542 DCUN1D4Q92564 292 aa4.87□□□□□ -1.63
LTBR-212ENST00000543542 DLX4Q92988 240 aaPredicted RBP4.87□□□□□ -1.63
LTBR-212ENST00000543542 BSCL2Q96G97 398 aaPredicted RBP4.87□□□□□ -1.63
LTBR-212ENST00000543542 ACY3Q96HD9 319 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms