RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 FREM3P0C091 2139 aa5.77□□□□□ -1.48
SRGAP1-206ENST00000543397 TMEM189A5PLL7 270 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 IGHV3-11P01762 117 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 CRYGCP07315 174 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 C8orf88P0DMB2 117 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 GPR183P32249 361 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 NCMAPQ5T1S8 102 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 MRPL54Q6P161 138 aaKnown RBP5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 H1FOOQ8IZA3 346 aaPredicted RBP5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 KLHDC1Q8N7A1 406 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 C5orf66Q9H5L9 145 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 HSPB7Q9UBY9 170 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 VCYO14598 125 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 IGKV3-20P01619 116 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 PRB3Q04118 309 aaPredicted RBP5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 ZNF345Q14585 488 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 LRP11Q86VZ4 500 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 FER1L5A0AVI2 2057 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 IGHV3-49A0A0A0MS15 119 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 NPIPB6E9PJ23 425 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 DLEU1O43261 78 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 HIST1H1AQ02539 215 aaPredicted RBP5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 AMMECR1LQ6DCA0 310 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 LYRM2Q9NU23 88 aaPredicted RBP5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 CRIM1Q9NZV1 1036 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 C7orf66A4D0T2 115 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 SIGLEC5O15389 551 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 NDUFC2O95298 119 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 CA1P00915 261 aaPredicted RBP5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 SLC25A16P16260 332 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 VWC2Q2TAL6 325 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 ANKRD29Q8N6D5 301 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 FGFBP3Q8TAT2 258 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 ST6GAL2Q96JF0 529 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 TXNDC17Q9BRA2 123 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 SPG11Q96JI7 2443 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 TEX50A0A1B0GTY4 177 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 A8MWL6 223 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 ISLRO14498 428 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 IGHV3-23P01764 117 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 SUMO2P61956 95 aaKnown RBP5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 GLMPQ8WWB7 406 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 ITLN2Q8WWU7 325 aaPredicted RBP5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 TMEM70Q9BUB7 260 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 OR5AC2Q9NZP5 309 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 LSM4Q9Y4Z0 139 aaKnown RBP5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 PHLDA3Q9Y5J5 127 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 S4R3C0 116 aa5.77□□□□□ -1.49
SRGAP1-206ENST00000543397 PIP4P1Q86T03 277 aa5.76□□□□□ -1.49
SRGAP1-206ENST00000543397 GATAD1Q8WUU5 269 aa5.76□□□□□ -1.49
SRGAP1-206ENST00000543397 C19orf24Q9BVV8 132 aa5.76□□□□□ -1.49
SRGAP1-206ENST00000543397 MSGN1A6NI15 193 aa5.76□□□□□ -1.49
SRGAP1-206ENST00000543397 CA2P00918 260 aa5.76□□□□□ -1.49
SRGAP1-206ENST00000543397 WNT2P09544 360 aa5.76□□□□□ -1.49
SRGAP1-206ENST00000543397 MYOD1P15172 320 aa5.76□□□□□ -1.49
SRGAP1-206ENST00000543397 TCF15Q12870 199 aa5.76□□□□□ -1.49
SRGAP1-206ENST00000543397 IGFL3Q6UXB1 125 aa5.76□□□□□ -1.49
SRGAP1-206ENST00000543397 OR10C1Q96KK4 312 aa5.76□□□□□ -1.49
SRGAP1-206ENST00000543397 HSPB8Q9UJY1 196 aa5.76□□□□□ -1.49
SRGAP1-206ENST00000543397 UBE2L6O14933 153 aa5.76□□□□□ -1.49
SRGAP1-206ENST00000543397 ZNF253O75346 499 aa5.76□□□□□ -1.49
SRGAP1-206ENST00000543397 CD24P25063 80 aa5.76□□□□□ -1.49
SRGAP1-206ENST00000543397 CLEC19AQ6UXS0 136 aa5.76□□□□□ -1.49
SRGAP1-206ENST00000543397 PLPPR1Q8TBJ4 325 aa5.76□□□□□ -1.49
SRGAP1-206ENST00000543397 ZNF319Q9P2F9 582 aa5.76□□□□□ -1.49
SRGAP1-206ENST00000543397 TCRBV4S1A1TA0A5B7 111 aa5.76□□□□□ -1.49
SRGAP1-206ENST00000543397 SRRM5B3KS81 715 aa5.76□□□□□ -1.49
SRGAP1-206ENST00000543397 YPEL1O60688 119 aa5.76□□□□□ -1.49
SRGAP1-206ENST00000543397 HIST3H3Q16695 136 aa5.76□□□□□ -1.49
SRGAP1-206ENST00000543397 SMIM8Q96KF7 97 aa5.76□□□□□ -1.49
SRGAP1-206ENST00000543397 YPEL2Q96QA6 119 aa5.76□□□□□ -1.49
SRGAP1-206ENST00000543397 NABP2Q9BQ15 211 aa5.76□□□□□ -1.49
SRGAP1-206ENST00000543397 PSMG3Q9BT73 122 aaPredicted RBP5.76□□□□□ -1.49
SRGAP1-206ENST00000543397 AURKAIP1Q9NWT8 199 aaPredicted RBP5.76□□□□□ -1.49
SRGAP1-206ENST00000543397 FOXA2Q9Y261 457 aaPredicted RBP5.76□□□□□ -1.49
SRGAP1-206ENST00000543397 LY6G6EA0A0G2JKS1 128 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 C17orf98A8MV24 154 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 TEX22C9J3V5 150 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 TSPAN13O95857 204 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 CD74P04233 296 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 BCL2P10415 239 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 CRYGSP22914 178 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 CX3CL1P78423 397 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 DLK1P80370 383 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 DTX1Q86Y01 620 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 BEND2Q8NDZ0 799 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 OR5AN1Q8NGI8 311 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 U3KQA8 63 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 ZGRF1Q86YA3 2104 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 SAA2-SAA4A0A096LPE2 208 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 B4DEV8 164 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 BUB3O43684 328 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 LYPD3O95274 346 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 SAA2P0DJI9 122 aaPredicted RBP5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 HERVK_113P61574 105 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 TMEM187Q14656 261 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 TWIST1Q15672 202 aa5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 WDR25Q64LD2 544 aaPredicted RBP5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 ZNF474Q6S9Z5 364 aaPredicted RBP5.75□□□□□ -1.49
SRGAP1-206ENST00000543397 FAM159AQ6UWV7 190 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms