RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 SCGB3A1Q96QR1 104 aa0.37□□□□□ -2.35
KNTC1-213ENST00000542727 HIST1H2BNQ99877 126 aa0.37□□□□□ -2.35
KNTC1-213ENST00000542727 HIST1H2BMQ99879 126 aa0.37□□□□□ -2.35
KNTC1-213ENST00000542727 TMEM147Q9BVK8 224 aa0.37□□□□□ -2.35
KNTC1-213ENST00000542727 CMTM6Q9NX76 183 aa0.37□□□□□ -2.35
KNTC1-213ENST00000542727 ZFP30Q9Y2G7 519 aa0.37□□□□□ -2.35
KNTC1-213ENST00000542727 C2orf70A6NJV1 201 aa0.36□□□□□ -2.35
KNTC1-213ENST00000542727 LRRN3E7EW58 273 aa0.36□□□□□ -2.35
KNTC1-213ENST00000542727 IGKV1-5P01602 117 aa0.36□□□□□ -2.35
KNTC1-213ENST00000542727 TNNC2P02585 160 aa0.36□□□□□ -2.35
KNTC1-213ENST00000542727 MAGEA2P43356 314 aa0.36□□□□□ -2.35
KNTC1-213ENST00000542727 CD151P48509 253 aa0.36□□□□□ -2.35
KNTC1-213ENST00000542727 AP2S1P53680 142 aaPredicted RBP0.36□□□□□ -2.35
KNTC1-213ENST00000542727 IFITM2Q01629 132 aa0.36□□□□□ -2.35
KNTC1-213ENST00000542727 KHDC3LQ587J8 217 aa0.36□□□□□ -2.35
KNTC1-213ENST00000542727 RNASE10Q5GAN6 216 aaKnown RBP0.36□□□□□ -2.35
KNTC1-213ENST00000542727 PDPK2PQ6A1A2 396 aa0.36□□□□□ -2.35
KNTC1-213ENST00000542727 FAM151BQ6UXP7 276 aa0.36□□□□□ -2.35
KNTC1-213ENST00000542727 DPPA3Q6W0C5 159 aa0.36□□□□□ -2.35
KNTC1-213ENST00000542727 OR4E2Q8NGC2 313 aa0.36□□□□□ -2.35
KNTC1-213ENST00000542727 OPTNQ96CV9 577 aa0.36□□□□□ -2.35
KNTC1-213ENST00000542727 IMP4Q96G21 291 aaKnown RBP0.36□□□□□ -2.35
KNTC1-213ENST00000542727 XPNPEP1Q9NQW7 623 aa0.36□□□□□ -2.35
KNTC1-213ENST00000542727 TP73-AS1Q9UF72 201 aa0.36□□□□□ -2.35
KNTC1-213ENST00000542727 MUC5ACP98088 5654 aa0.36□□□□□ -2.35
KNTC1-213ENST00000542727 DCCP43146 1447 aa0.36□□□□□ -2.35
KNTC1-213ENST00000542727 HECW2Q9P2P5 1572 aa0.36□□□□□ -2.35
KNTC1-213ENST00000542727 KIAA1549Q9HCM3 1950 aa0.36□□□□□ -2.35
KNTC1-213ENST00000542727 MYO18AQ92614 2054 aaKnown RBP0.35□□□□□ -2.35
KNTC1-213ENST00000542727 A0A1B0GV50 99 aa0.35□□□□□ -2.35
KNTC1-213ENST00000542727 PQLC2LA1A4F0 135 aa0.35□□□□□ -2.35
KNTC1-213ENST00000542727 C19orf84I3L1E1 186 aa0.35□□□□□ -2.35
KNTC1-213ENST00000542727 OR1I1O60431 355 aa0.35□□□□□ -2.35
KNTC1-213ENST00000542727 HYPMO75409 117 aa0.35□□□□□ -2.35
KNTC1-213ENST00000542727 DEXIO95424 95 aa0.35□□□□□ -2.35
KNTC1-213ENST00000542727 TPM3P06753 285 aa0.35□□□□□ -2.35
KNTC1-213ENST00000542727 CTSDP07339 412 aaPredicted RBP0.35□□□□□ -2.35
KNTC1-213ENST00000542727 HTR1AP08908 422 aa0.35□□□□□ -2.35
KNTC1-213ENST00000542727 MGST1P10620 155 aaKnown RBP0.35□□□□□ -2.35
KNTC1-213ENST00000542727 SSR2P43308 183 aa0.35□□□□□ -2.35
KNTC1-213ENST00000542727 DEFA1P59665 94 aa0.35□□□□□ -2.35
KNTC1-213ENST00000542727 TPM4P67936 248 aa0.35□□□□□ -2.35
KNTC1-213ENST00000542727 HBA1P69905 142 aa0.35□□□□□ -2.35
KNTC1-213ENST00000542727 SPANXN3Q5MJ09 141 aa0.35□□□□□ -2.35
KNTC1-213ENST00000542727 RPL22L1Q6P5R6 122 aaKnown RBP0.35□□□□□ -2.35
KNTC1-213ENST00000542727 Q6ZQT0 140 aa0.35□□□□□ -2.35
KNTC1-213ENST00000542727 PHF13Q86YI8 300 aaPredicted RBP0.35□□□□□ -2.35
KNTC1-213ENST00000542727 OR4D11Q8NGI4 311 aa0.35□□□□□ -2.35
KNTC1-213ENST00000542727 MRPL30Q8TCC3 161 aaKnown RBP0.35□□□□□ -2.35
KNTC1-213ENST00000542727 ULBP3Q9BZM4 244 aa0.35□□□□□ -2.35
KNTC1-213ENST00000542727 FANCMQ8IYD8 2048 aa0.35□□□□□ -2.35
KNTC1-213ENST00000542727 PTPRFP10586 1907 aa0.34□□□□□ -2.35
KNTC1-213ENST00000542727 KIF1BO60333 1816 aa0.34□□□□□ -2.35
KNTC1-213ENST00000542727 SIP14410 1827 aa0.34□□□□□ -2.35
KNTC1-213ENST00000542727 TRBV6-8A0A0A6YYG3 113 aa0.34□□□□□ -2.36
KNTC1-213ENST00000542727 TRAV3A0A0B4J244 114 aa0.34□□□□□ -2.36
KNTC1-213ENST00000542727 SLC16A4O15374 487 aa0.34□□□□□ -2.36
KNTC1-213ENST00000542727 CALB1P05937 261 aa0.34□□□□□ -2.36
KNTC1-213ENST00000542727 RAB4BP61018 213 aa0.34□□□□□ -2.36
KNTC1-213ENST00000542727 PMAIP1Q13794 54 aa0.34□□□□□ -2.36
KNTC1-213ENST00000542727 RHEBQ15382 184 aa0.34□□□□□ -2.36
KNTC1-213ENST00000542727 RIC1Q4ADV7 1423 aa0.34□□□□□ -2.36
KNTC1-213ENST00000542727 SPANXN5Q5MJ07 72 aa0.34□□□□□ -2.36
KNTC1-213ENST00000542727 HIST2H3PS2Q5TEC6 136 aa0.34□□□□□ -2.36
KNTC1-213ENST00000542727 SFXN4Q6P4A7 337 aa0.34□□□□□ -2.36
KNTC1-213ENST00000542727 CD200R1LQ6Q8B3 271 aa0.34□□□□□ -2.36
KNTC1-213ENST00000542727 MIR17HGQ75NE6 70 aa0.34□□□□□ -2.36
KNTC1-213ENST00000542727 CNTRLQ7Z7A1 2325 aa0.34□□□□□ -2.36
KNTC1-213ENST00000542727 Q8N814 137 aa0.34□□□□□ -2.36
KNTC1-213ENST00000542727 OR5A1Q8NGJ0 315 aa0.34□□□□□ -2.36
KNTC1-213ENST00000542727 PFN4Q8NHR9 129 aa0.34□□□□□ -2.36
KNTC1-213ENST00000542727 ZNF418Q8TF45 676 aaPredicted RBP0.34□□□□□ -2.36
KNTC1-213ENST00000542727 C11orf68Q9H3H3 251 aaKnown RBP0.34□□□□□ -2.36
KNTC1-213ENST00000542727 USE1Q9NZ43 259 aa0.34□□□□□ -2.36
KNTC1-213ENST00000542727 LSM5Q9Y4Y9 91 aaKnown RBP0.34□□□□□ -2.36
KNTC1-213ENST00000542727 ATP6V1DQ9Y5K8 247 aa0.34□□□□□ -2.36
KNTC1-213ENST00000542727 PIK3R4Q99570 1358 aa0.33□□□□□ -2.36
KNTC1-213ENST00000542727 CITO14578 2027 aa0.33□□□□□ -2.36
KNTC1-213ENST00000542727 LOC110117498A0A087WWA1 95 aa0.33□□□□□ -2.36
KNTC1-213ENST00000542727 EEF1E1-BLOC1S5C9J1V9 151 aa0.33□□□□□ -2.36
KNTC1-213ENST00000542727 OR2T1O43869 369 aa0.33□□□□□ -2.36
KNTC1-213ENST00000542727 HLA-DRB1P01911 266 aa0.33□□□□□ -2.36
KNTC1-213ENST00000542727 GDF5OSQ5U4N7 250 aa0.33□□□□□ -2.36
KNTC1-213ENST00000542727 C8orf74Q6P047 294 aa0.33□□□□□ -2.36
KNTC1-213ENST00000542727 LPCAT3Q6P1A2 487 aa0.33□□□□□ -2.36
KNTC1-213ENST00000542727 DEFB128Q7Z7B8 93 aa0.33□□□□□ -2.36
KNTC1-213ENST00000542727 ANKRD29Q8N6D5 301 aa0.33□□□□□ -2.36
KNTC1-213ENST00000542727 SIGLECL1Q8N7X8 197 aa0.33□□□□□ -2.36
KNTC1-213ENST00000542727 LLPHQ9BRT6 129 aaKnown RBP0.33□□□□□ -2.36
KNTC1-213ENST00000542727 SLC39A9Q9NUM3 307 aa0.33□□□□□ -2.36
KNTC1-213ENST00000542727 ACER3Q9NUN7 267 aa0.33□□□□□ -2.36
KNTC1-213ENST00000542727 FBXL12Q9NXK8 326 aa0.33□□□□□ -2.36
KNTC1-213ENST00000542727 NKIRAS1Q9NYS0 192 aa0.33□□□□□ -2.36
KNTC1-213ENST00000542727 ERGIC3Q9Y282 383 aa0.33□□□□□ -2.36
KNTC1-213ENST00000542727 PKIGQ9Y2B9 76 aa0.33□□□□□ -2.36
KNTC1-213ENST00000542727 TGIF2-C20orf24A0A0A6YYL0 155 aa0.32□□□□□ -2.36
KNTC1-213ENST00000542727 A0A0D9SG52 128 aa0.32□□□□□ -2.36
KNTC1-213ENST00000542727 DPRXA6NFQ7 191 aa0.32□□□□□ -2.36
KNTC1-213ENST00000542727 PSMD12O00232 456 aaPredicted RBP0.32□□□□□ -2.36
KNTC1-213ENST00000542727 SULT1B1O43704 296 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms