RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 CD69Q07108 199 aa13.78□□□□□ -0.2
TMEM50B-210ENST00000542230 MMDQ15546 238 aa13.78□□□□□ -0.2
TMEM50B-210ENST00000542230 KHDC3LQ587J8 217 aa13.78□□□□□ -0.2
TMEM50B-210ENST00000542230 OR10J1P30954 320 aa13.78□□□□□ -0.2
TMEM50B-210ENST00000542230 COMPP49747 757 aaPredicted RBP13.78□□□□□ -0.2
TMEM50B-210ENST00000542230 CD81P60033 236 aa13.78□□□□□ -0.2
TMEM50B-210ENST00000542230 MMD2Q8IY49 270 aa13.78□□□□□ -0.2
TMEM50B-210ENST00000542230 A0A1W2PN81 502 aa13.77□□□□□ -0.21
TMEM50B-210ENST00000542230 C7orf77A4D0Y5 90 aa13.77□□□□□ -0.21
TMEM50B-210ENST00000542230 CYB5BO43169 146 aa13.77□□□□□ -0.21
TMEM50B-210ENST00000542230 ACTL6BO94805 426 aa13.77□□□□□ -0.21
TMEM50B-210ENST00000542230 CHRNA7P36544 502 aa13.77□□□□□ -0.21
TMEM50B-210ENST00000542230 RPL27AP46776 148 aaKnown RBP13.77□□□□□ -0.21
TMEM50B-210ENST00000542230 RPS10P5Q9NQ39 176 aa13.77□□□□□ -0.21
TMEM50B-210ENST00000542230 DMRT1Q9Y5R6 373 aa13.77□□□□□ -0.21
TMEM50B-210ENST00000542230 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.77□□□□□ -0.216e-7■■■■■ 32.8
TMEM50B-210ENST00000542230 SEC14L6B5MCN3 397 aa13.76□□□□□ -0.21
TMEM50B-210ENST00000542230 TEX22C9J3V5 150 aa13.76□□□□□ -0.21
TMEM50B-210ENST00000542230 FOXH1O75593 365 aa13.76□□□□□ -0.21
TMEM50B-210ENST00000542230 TOX4O94842 621 aa13.76□□□□□ -0.21
TMEM50B-210ENST00000542230 PRR20EP86478 221 aa13.76□□□□□ -0.21
TMEM50B-210ENST00000542230 PRR20CP86479 221 aa13.76□□□□□ -0.21
TMEM50B-210ENST00000542230 PRR20DP86480 221 aa13.76□□□□□ -0.21
TMEM50B-210ENST00000542230 PRR20BP86481 221 aa13.76□□□□□ -0.21
TMEM50B-210ENST00000542230 PRR20AP86496 221 aa13.76□□□□□ -0.21
TMEM50B-210ENST00000542230 HES1Q14469 280 aa13.76□□□□□ -0.21
TMEM50B-210ENST00000542230 PLGLAQ15195 96 aa13.76□□□□□ -0.21
TMEM50B-210ENST00000542230 FAM90A2PQ658T7 463 aa13.76□□□□□ -0.21
TMEM50B-210ENST00000542230 C1orf122Q6ZSJ8 110 aa13.76□□□□□ -0.21
TMEM50B-210ENST00000542230 SLC16A13Q7RTY0 426 aa13.76□□□□□ -0.21
TMEM50B-210ENST00000542230 TMEM144Q7Z5S9 345 aa13.76□□□□□ -0.21
TMEM50B-210ENST00000542230 AJUBAQ96IF1 538 aa13.76□□□□□ -0.21
TMEM50B-210ENST00000542230 EAF1Q96JC9 268 aaPredicted RBP13.76□□□□□ -0.21
TMEM50B-210ENST00000542230 FAM103A1Q9BTL3 118 aaKnown RBP13.76□□□□□ -0.21
TMEM50B-210ENST00000542230 SLC45A2Q9UMX9 530 aa13.76□□□□□ -0.21
TMEM50B-210ENST00000542230 CSPG4Q6UVK1 2322 aa13.76□□□□□ -0.21
TMEM50B-210ENST00000542230 INS-IGF2F8WCM5 200 aa13.76□□□□□ -0.21
TMEM50B-210ENST00000542230 H3BQ15 152 aa13.76□□□□□ -0.21
TMEM50B-210ENST00000542230 PERPQ96FX8 193 aa13.76□□□□□ -0.21
TMEM50B-210ENST00000542230 UNKLQ9H9P5 680 aaKnown RBP13.76□□□□□ -0.21
TMEM50B-210ENST00000542230 NAV2Q8IVL1 2488 aa13.76□□□□□ -0.21
TMEM50B-210ENST00000542230 PAGE4O60829 102 aa13.75□□□□□ -0.21
TMEM50B-210ENST00000542230 PDLIM4P50479 330 aa13.75□□□□□ -0.21
TMEM50B-210ENST00000542230 ATP5J2P56134 94 aa13.75□□□□□ -0.21
TMEM50B-210ENST00000542230 UBE2G2P60604 165 aa13.75□□□□□ -0.21
TMEM50B-210ENST00000542230 KIAA0141Q14154 515 aaPredicted RBP13.75□□□□□ -0.21
TMEM50B-210ENST00000542230 SMDT1Q9H4I9 107 aa13.75□□□□□ -0.21
TMEM50B-210ENST00000542230 IGHV3OR16-10A0A075B7F0 116 aa13.75□□□□□ -0.21
TMEM50B-210ENST00000542230 IGHV4-30-2A0A087WSY4 118 aa13.75□□□□□ -0.21
TMEM50B-210ENST00000542230 A0A1W2PPV4 95 aa13.75□□□□□ -0.21
TMEM50B-210ENST00000542230 ARL14EPLP0DKL9 152 aa13.75□□□□□ -0.21
TMEM50B-210ENST00000542230 COL8A1P27658 744 aa13.75□□□□□ -0.21
TMEM50B-210ENST00000542230 KIR3DL3Q8N743 410 aa13.75□□□□□ -0.21
TMEM50B-210ENST00000542230 SRSF12Q8WXF0 261 aaKnown RBP13.75□□□□□ -0.21
TMEM50B-210ENST00000542230 FAM168AQ92567 244 aa13.75□□□□□ -0.21
TMEM50B-210ENST00000542230 NPIPB3Q92617 1050 aa13.75□□□□□ -0.21
TMEM50B-210ENST00000542230 ISOC2Q96AB3 205 aa13.75□□□□□ -0.21
TMEM50B-210ENST00000542230 MISP3Q96FF7 219 aa13.75□□□□□ -0.21
TMEM50B-210ENST00000542230 VAX2Q9UIW0 290 aa13.75□□□□□ -0.21
TMEM50B-210ENST00000542230 RPL29P47914 159 aaKnown RBP13.74□□□□□ -0.21
TMEM50B-210ENST00000542230 ZNF90Q03938 601 aa13.74□□□□□ -0.21
TMEM50B-210ENST00000542230 HABP2Q14520 560 aaPredicted RBP13.74□□□□□ -0.21
TMEM50B-210ENST00000542230 FAM120AOSQ5T036 256 aa13.74□□□□□ -0.21
TMEM50B-210ENST00000542230 SLC35E3Q7Z769 313 aa13.74□□□□□ -0.21
TMEM50B-210ENST00000542230 SPOCK3Q9BQ16 436 aa13.74□□□□□ -0.21
TMEM50B-210ENST00000542230 CEACAM3P40198 252 aa13.74□□□□□ -0.21
TMEM50B-210ENST00000542230 MOSP00540 346 aa13.73□□□□□ -0.21
TMEM50B-210ENST00000542230 MEF2BQ02080 365 aaPredicted RBP13.73□□□□□ -0.21
TMEM50B-210ENST00000542230 MIR17HGQ75NE6 70 aa13.73□□□□□ -0.21
TMEM50B-210ENST00000542230 PIP4P2Q8N4L2 257 aa13.73□□□□□ -0.21
TMEM50B-210ENST00000542230 SLC25A33Q9BSK2 321 aa13.73□□□□□ -0.21
TMEM50B-210ENST00000542230 GSX1Q9H4S2 264 aaPredicted RBP13.73□□□□□ -0.21
TMEM50B-210ENST00000542230 KLF2Q9Y5W3 355 aaPredicted RBP13.73□□□□□ -0.21
TMEM50B-210ENST00000542230 APCP25054 2843 aa13.73□□□□□ -0.21
TMEM50B-210ENST00000542230 IGKV1D-37A0A075B6S9 117 aa13.73□□□□□ -0.21
TMEM50B-210ENST00000542230 NBR2O15453 112 aa13.73□□□□□ -0.21
TMEM50B-210ENST00000542230 ATF4P18848 351 aaPredicted RBP13.73□□□□□ -0.21
TMEM50B-210ENST00000542230 OR51G1Q8NGK1 321 aa13.73□□□□□ -0.21
TMEM50B-210ENST00000542230 C10orf105Q8TEF2 133 aa13.73□□□□□ -0.21
TMEM50B-210ENST00000542230 ZNF469Q96JG9 3925 aaPredicted RBP13.73□□□□□ -0.21
TMEM50B-210ENST00000542230 ZNF727A8MUV8 499 aa13.72□□□□□ -0.21
TMEM50B-210ENST00000542230 FNDC10F2Z333 226 aa13.72□□□□□ -0.21
TMEM50B-210ENST00000542230 CNIH1O95406 144 aa13.72□□□□□ -0.21
TMEM50B-210ENST00000542230 RND2P52198 227 aa13.72□□□□□ -0.21
TMEM50B-210ENST00000542230 RAB31Q13636 194 aa13.72□□□□□ -0.21
TMEM50B-210ENST00000542230 MORN5Q5VZ52 161 aa13.72□□□□□ -0.21
TMEM50B-210ENST00000542230 OR4F5Q8NH21 305 aa13.72□□□□□ -0.21
TMEM50B-210ENST00000542230 OR4F4Q96R69 305 aa13.72□□□□□ -0.21
TMEM50B-210ENST00000542230 STAG3L2P0CL84 134 aa13.72□□□□□ -0.21
TMEM50B-210ENST00000542230 STAG3L3P0CL85 134 aa13.72□□□□□ -0.21
TMEM50B-210ENST00000542230 NPPCP23582 126 aa13.72□□□□□ -0.21
TMEM50B-210ENST00000542230 SAA4P35542 130 aa13.72□□□□□ -0.21
TMEM50B-210ENST00000542230 ATP5G3P48201 142 aa13.72□□□□□ -0.21
TMEM50B-210ENST00000542230 ATP5IP56385 69 aaPredicted RBP13.72□□□□□ -0.21
TMEM50B-210ENST00000542230 KLF17Q5JT82 389 aaPredicted RBP13.72□□□□□ -0.21
TMEM50B-210ENST00000542230 FAM78BQ5VT40 261 aa13.72□□□□□ -0.21
TMEM50B-210ENST00000542230 TMEM37Q8WXS4 190 aa13.72□□□□□ -0.21
TMEM50B-210ENST00000542230 SLC35E1Q96K37 410 aa13.72□□□□□ -0.21
TMEM50B-210ENST00000542230 GPX4P36969 197 aaPredicted RBP13.71□□□□□ -0.21
TMEM50B-210ENST00000542230 ZNF674Q2M3X9 581 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms