RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 NXF2Q9GZY0 626 aaKnown RBP8.48□□□□□ -1.05
VTN-203ENST00000542029 COPZ2Q9P299 210 aa8.48□□□□□ -1.05
VTN-203ENST00000542029 EXTL2Q9UBQ6 330 aa8.48□□□□□ -1.05
VTN-203ENST00000542029 KLK11Q9UBX7 282 aa8.48□□□□□ -1.05
VTN-203ENST00000542029 TRAV14DV4A0A0A6YYC5 116 aa8.47□□□□□ -1.05
VTN-203ENST00000542029 CHEK1O14757 476 aa8.47□□□□□ -1.05
VTN-203ENST00000542029 SPRY2O43597 315 aa8.47□□□□□ -1.05
VTN-203ENST00000542029 SCGB2A1O75556 95 aa8.47□□□□□ -1.05
VTN-203ENST00000542029 IFNA17P01571 189 aa8.47□□□□□ -1.05
VTN-203ENST00000542029 CD3DP04234 171 aa8.47□□□□□ -1.05
VTN-203ENST00000542029 CTSDP07339 412 aaPredicted RBP8.47□□□□□ -1.05
VTN-203ENST00000542029 ATF4P18848 351 aaPredicted RBP8.47□□□□□ -1.05
VTN-203ENST00000542029 TAS2R19P59542 299 aa8.47□□□□□ -1.05
VTN-203ENST00000542029 PAFAH1B2P68402 229 aa8.47□□□□□ -1.05
VTN-203ENST00000542029 TMEM217Q8N7C4 229 aa8.47□□□□□ -1.05
VTN-203ENST00000542029 SLC35G3Q8N808 338 aa8.47□□□□□ -1.05
VTN-203ENST00000542029 TMEM229BQ8NBD8 167 aa8.47□□□□□ -1.05
VTN-203ENST00000542029 OR52I2Q8NH67 350 aa8.47□□□□□ -1.05
VTN-203ENST00000542029 PINX1Q96BK5 328 aaKnown RBP8.47□□□□□ -1.05
VTN-203ENST00000542029 RRNAD1Q96FB5 475 aaKnown RBP8.47□□□□□ -1.05
VTN-203ENST00000542029 GALNT14Q96FL9 552 aa8.47□□□□□ -1.05
VTN-203ENST00000542029 ENY2Q9NPA8 101 aa8.47□□□□□ -1.05
VTN-203ENST00000542029 RABL2AQ9UBK7 228 aaPredicted RBP8.47□□□□□ -1.05
VTN-203ENST00000542029 RABL2BQ9UNT1 228 aa8.47□□□□□ -1.05
VTN-203ENST00000542029 STARD9Q9P2P6 4700 aa8.47□□□□□ -1.05
VTN-203ENST00000542029 RYR2Q92736 4967 aa8.47□□□□□ -1.05
VTN-203ENST00000542029 C3orf85A0A1B0GTC6 90 aa8.46□□□□□ -1.06
VTN-203ENST00000542029 ZNF207O43670 478 aaKnown RBP8.46□□□□□ -1.06
VTN-203ENST00000542029 RAB3DO95716 219 aa8.46□□□□□ -1.06
VTN-203ENST00000542029 CD74P04233 296 aa8.46□□□□□ -1.06
VTN-203ENST00000542029 TNFRSF9Q07011 255 aa8.46□□□□□ -1.06
VTN-203ENST00000542029 MEF2DQ14814 521 aa8.46□□□□□ -1.06
VTN-203ENST00000542029 TRIM16LQ309B1 348 aa8.46□□□□□ -1.06
VTN-203ENST00000542029 ODF3L2Q3SX64 289 aa8.46□□□□□ -1.06
VTN-203ENST00000542029 GPR107Q5VW38 600 aa8.46□□□□□ -1.06
VTN-203ENST00000542029 FAM219AQ8IW50 185 aa8.46□□□□□ -1.06
VTN-203ENST00000542029 UBQLN2Q9UHD9 624 aa8.46□□□□□ -1.06
VTN-203ENST00000542029 IGHV3OR16-8A0A075B7F1 116 aa8.45□□□□□ -1.06
VTN-203ENST00000542029 A0A0B4J293 547 aa8.45□□□□□ -1.06
VTN-203ENST00000542029 GABARAPH6UMI1 98 aa8.45□□□□□ -1.06
VTN-203ENST00000542029 P0C879 139 aa8.45□□□□□ -1.06
VTN-203ENST00000542029 PI3P19957 117 aa8.45□□□□□ -1.06
VTN-203ENST00000542029 UCP1P25874 307 aa8.45□□□□□ -1.06
VTN-203ENST00000542029 SURF2Q15527 256 aaPredicted RBP8.45□□□□□ -1.06
VTN-203ENST00000542029 RNASE12Q5GAN4 147 aaKnown RBP8.45□□□□□ -1.06
VTN-203ENST00000542029 STEAP1BQ6NZ63 245 aa8.45□□□□□ -1.06
VTN-203ENST00000542029 ZNF600Q6ZNG1 722 aa8.45□□□□□ -1.06
VTN-203ENST00000542029 GPR141Q7Z602 305 aa8.45□□□□□ -1.06
VTN-203ENST00000542029 RNASE11Q8TAA1 199 aaKnown RBP8.45□□□□□ -1.06
VTN-203ENST00000542029 RNF183Q96D59 192 aa8.45□□□□□ -1.06
VTN-203ENST00000542029 TP53RKQ96S44 253 aa8.45□□□□□ -1.06
VTN-203ENST00000542029 ABHD1Q96SE0 405 aa8.45□□□□□ -1.06
VTN-203ENST00000542029 RNF2Q99496 336 aa8.45□□□□□ -1.06
VTN-203ENST00000542029 TMEM231Q9H6L2 316 aa8.45□□□□□ -1.06
VTN-203ENST00000542029 MAP6D1Q9H9H5 199 aa8.45□□□□□ -1.06
VTN-203ENST00000542029 CACFD1Q9UGQ2 172 aa8.45□□□□□ -1.06
VTN-203ENST00000542029 A0A1W2PS18 150 aa8.44□□□□□ -1.06
VTN-203ENST00000542029 NUPR2A6NF83 97 aa8.44□□□□□ -1.06
VTN-203ENST00000542029 RGS5O15539 181 aa8.44□□□□□ -1.06
VTN-203ENST00000542029 ST8SIA3O43173 380 aa8.44□□□□□ -1.06
VTN-203ENST00000542029 DFFBO76075 338 aa8.44□□□□□ -1.06
VTN-203ENST00000542029 IGKV1-5P01602 117 aa8.44□□□□□ -1.06
VTN-203ENST00000542029 SMIM18P0DKX4 95 aa8.44□□□□□ -1.06
VTN-203ENST00000542029 RPL5P46777 297 aaKnown RBP8.44□□□□□ -1.06
VTN-203ENST00000542029 HOXA1P49639 335 aaPredicted RBP8.44□□□□□ -1.06
VTN-203ENST00000542029 PPP5CP53041 499 aa8.44□□□□□ -1.06
VTN-203ENST00000542029 DEFB135Q30KP9 77 aa8.44□□□□□ -1.06
VTN-203ENST00000542029 SCGB2B2Q4G0G5 96 aa8.44□□□□□ -1.06
VTN-203ENST00000542029 PVRIGQ6DKI7 326 aa8.44□□□□□ -1.06
VTN-203ENST00000542029 OR13C8Q8NGS7 320 aa8.44□□□□□ -1.06
VTN-203ENST00000542029 OR52E5Q8NH55 327 aa8.44□□□□□ -1.06
VTN-203ENST00000542029 MRPS26Q9BYN8 205 aaKnown RBP8.44□□□□□ -1.06
VTN-203ENST00000542029 NAA50Q9GZZ1 169 aaKnown RBP8.44□□□□□ -1.06
VTN-203ENST00000542029 CSTL1Q9H114 145 aa8.44□□□□□ -1.06
VTN-203ENST00000542029 C14orf166Q9Y224 244 aaKnown RBP8.44□□□□□ -1.06
VTN-203ENST00000542029 TRAV2A0A0B4J234 112 aa8.43□□□□□ -1.06
VTN-203ENST00000542029 RPS10-NUDT3A0A1W2PQS6 291 aa8.43□□□□□ -1.06
VTN-203ENST00000542029 CXorf65A6NEN9 183 aa8.43□□□□□ -1.06
VTN-203ENST00000542029 MPTX1A8MV57 137 aa8.43□□□□□ -1.06
VTN-203ENST00000542029 DISC1C4P0D8 188 aa8.43□□□□□ -1.06
VTN-203ENST00000542029 TMEM50AO95807 157 aa8.43□□□□□ -1.06
VTN-203ENST00000542029 RPL35AP18077 110 aaKnown RBP8.43□□□□□ -1.06
VTN-203ENST00000542029 ETV6P41212 452 aa8.43□□□□□ -1.06
VTN-203ENST00000542029 SPCS3P61009 180 aa8.43□□□□□ -1.06
VTN-203ENST00000542029 DHODHQ02127 395 aa8.43□□□□□ -1.06
VTN-203ENST00000542029 IZUMO4Q1ZYL8 232 aa8.43□□□□□ -1.06
VTN-203ENST00000542029 FAM90A2PQ658T7 463 aa8.43□□□□□ -1.06
VTN-203ENST00000542029 TOMM20LQ6UXN7 152 aa8.43□□□□□ -1.06
VTN-203ENST00000542029 TCF24Q7RTU0 167 aa8.43□□□□□ -1.06
VTN-203ENST00000542029 LYG2Q86SG7 212 aa8.43□□□□□ -1.06
VTN-203ENST00000542029 GATAD1Q8WUU5 269 aa8.43□□□□□ -1.06
VTN-203ENST00000542029 NARS2Q96I59 477 aaKnown RBP8.43□□□□□ -1.06
VTN-203ENST00000542029 TMEM222Q9H0R3 208 aa8.43□□□□□ -1.06
VTN-203ENST00000542029 VSIRQ9H7M9 311 aa8.43□□□□□ -1.06
VTN-203ENST00000542029 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.43□□□□□ -1.06
VTN-203ENST00000542029 PUS1Q9Y606 427 aaKnown RBP eCLIP8.43□□□□□ -1.06
VTN-203ENST00000542029 DNAH1Q9P2D7 4330 aa8.43□□□□□ -1.06
VTN-203ENST00000542029 TRAV30A0A087WSZ9 112 aa8.42□□□□□ -1.06
VTN-203ENST00000542029 A0A0J9YWU9 116 aa8.42□□□□□ -1.06
VTN-203ENST00000542029 TEX13DA0A0J9YY54 714 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms